BGIOSGA010194

From RiceWiki
Revision as of 09:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010194| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010194, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010194

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010194, complete gene.

LocusTag

OSJNBA0010N03.15

Ensembl Transcript ID

BGIOSGA010194-TA

Ensembl Protein ID

BGIOSGA010194-PA

Length

3798

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28055385..28059182

Sequence Coding Region

28058830..28059182,28057985..28058123,28057820..28057901,28057003..28057154,28055385..28055594

Genome Context

<gbrowseImage1> name=IndicaChromosome03:28055385..28059182 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:28055385..28059182 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTCTCCTCGCCGCCGCCGCCGTCGGGCCACACAAAACCCTAAACCCTACCCTGAGCCCGCCGAGCTCCGGCGGCCGCCGCCCCCGCCTCCGCTTCCCGCTGCCCCTTCCGCGGGGCGGCCACCTCCGCTGCTCCGCGGGGTACCGCGAGGCGGCGGCGGCGGCGGCGTCGACGTCGTCGACGACGACGACGCCGCGGCCGACGGAGATCCCGTGGAGCAGGGAGCTCTGCAACTCCGTTCGGCTCATCGGGACGGTGGGCACCGAGGTGGAGCTGCGGCAGCTGCCCAGCGGCGGCTCCGTCGCGCGGGGGCGCCTCGCCATCTGGAAGTCGGCCACCGAGACCACATGGGTGACTCTAGCATTTTGGGATGACCTAGCGGTTGTGGCTTCTGAGCATGTGAAGAAGGGTGACCGAATATTTGTTTCTGGACGCCTTGTGTCGGACACTGTTGATGAGGGCCCTGAGAAACGACAGGTTTATTATAAGGTTGTGGTTCAACAGTTCAATTTCATTGAGTCCTTTCAGCAAGTGCAGTTATATGAGCCAGAGGCAGGCCTGGATACCTTAGGTGGAAAGCATGGAGATTATGTTGGTTCTACCTCTGGCTCGAGTGAGGGTAAAAGTAGGGACCATGTTGACTCATCCTCCCGTTCAACTGAACAGTTGTGGCAAGCCTTCTTTGCTAATCCTCTTGACTGGTGGGATAACAGGACAAATAAGAAGAACCCGAGGTATCCAGACTTCAAGCACAAACACACCGGTGAAGCATTGTGGGTTGATGGGAGGAACAATCCAAATTGGGTTATCTCCCAGTTGGCAATTCTGGACTCGAGAATGGGTTCTCTTCAAGGCAATGATAGGAAACCAGTTGCCTTTATGTATGCTGATGACTTCATGACACCTGACACCGACACTGAAGCCCATATGTGA</cdnaseq>

Protein Sequence

<aaseq>MVLLAAAAVGPHKTLNPTLSPPSSGGRRPRLRFPLPLPRGGHLRCSAGYREAAAAAASTSSTTTTPRPTEIPWSRELCNSVRLIGTVGTEVELRQLPSGGSVARGRLAIWKSATETTWVTLAFWDDLAVVASEHVKKGDRIFVSGRLVSDTVDEGPEKRQVYYKVVVQQFNFIESFQQVQLYEPEAGLDTLGGKHGDYVGSTSGSSEGKSRDHVDSSSRSTEQLWQAFFANPLDWWDNRTNKKNPRYPDFKHKHTGEALWVDGRNNPNWVISQLAILDSRMGSLQGNDRKPVAFMYADDFMTPDTDTEAHM</aaseq>

Gene Sequence

<dnaseqindica>1..353#1060..1198#1282..1363#2029..2180#3589..3798#ATGGTTCTCCTCGCCGCCGCCGCCGTCGGGCCACACAAAACCCTAAACCCTACCCTGAGCCCGCCGAGCTCCGGCGGCCGCCGCCCCCGCCTCCGCTTCCCGCTGCCCCTTCCGCGGGGCGGCCACCTCCGCTGCTCCGCGGGGTACCGCGAGGCGGCGGCGGCGGCGGCGTCGACGTCGTCGACGACGACGACGCCGCGGCCGACGGAGATCCCGTGGAGCAGGGAGCTCTGCAACTCCGTTCGGCTCATCGGGACGGTGGGCACCGAGGTGGAGCTGCGGCAGCTGCCCAGCGGCGGCTCCGTCGCGCGGGGGCGCCTCGCCATCTGGAAGTCGGCCACCGAGACCACATGGTAATCGCCCCGTGATATGCCGTAGCGCTCGCCTCGGTTCCATCTATGCGTCTCGTTTTTTCAGTTTCTCTGTCGTTGGATTGGATGCCGGCAACGTGTTGGGCATTGTGCGCCAGTGTAGCATGTGGCCAATGAACTCGGCATTCTGGCGATATATGCAGAAGAGGAAGATTTTGTATCTGTTTTGCCCAACTCTCCATAATTAAATGGGGTTTGATTTTTTGCATTATAAATAGGTTGTTGTTATACAATGTGCAAGAGTCTGTGTATGGTTGCTAGCTGCACGTTTGGTGAAATTTTACTAAGAATTAAGTGAACTAAATTGTTATCTACAATGACTTGAATAATTGAAATTGAGTTATTGAAAAGAGCACTCTATTTGAGCAGCAGCAAAGGTTTAAGATAGATGTCCCATTTAGCATTGGTTTTCTGTCTGTTTGGTTAGCTGTCTAAAGGATATAGGAGTAAATAACGTCACAAGATTTTGAAACACATTGGTCAACAAATGAGTTGTGGCCTCTTGAAAATAATTAGCCAACTAAGCATGAGTTGGAGGTTTGGAGCTGTACCTCCTTCGTGCTATGTAAGACTAGTTCTTTAGCAGTCGTTTCAGAGTCATACACCTTAAATATTTGTGGTTTTATTACAAGTTTCATTATTACTATAAATTGTTTCCGAGTGCTTAATGATTGTAGTGATGCTTTAGGGTGACTCTAGCATTTTGGGATGACCTAGCGGTTGTGGCTTCTGAGCATGTGAAGAAGGGTGACCGAATATTTGTTTCTGGACGCCTTGTGTCGGACACTGTTGATGAGGGCCCTGAGAAACGACAGGTTTATTATAAGGTATAATCTCTGGTAATATTTCTTTCTTTGAGTTATTTTGATTCCTTTCCATGCTTTTATAAGAAGAACCATATGTTTCACAGGTTGTGGTTCAACAGTTCAATTTCATTGAGTCCTTTCAGCAAGTGCAGTTATATGAGCCAGAGGCAGGCCTGGATACCTTAGGTATGGATGTTATGTAGCCTGTAACATCTTTGATACTATCATGTGTATTATAAAACGGCGGGTTTCAAATTCTTGTGATGGAGTAGTGAACTAGTTGAAGAATACCAGTTCCAGAAGGCCATACTATCACATATGTAAACAAATAATATTTCAATTAATGTTATCTGTTTTCCCTAAAAGTAAAGAAATAGCACAGAACATTGCAGGCCTTAGTTCAGTCTTTGAATACTCTTGAAAATAATGAAAGGTTTGTTGCATTCTGAATTTCTGCCAATGCATAGCATAAAACTTCCTTTCCCAAATATTTTGTGCGGAAGTTTCAGAAAACCCACATATAAGCATTAGTTCTCACACAACCCTAATGGAGAATAATTGCATTGTGGGTTGTCTGTGTGGTCTAATGTGTGATACATGGTCAATTAATATGGAATTTTCTACAACTTTTTTCATTAAAGATGGGATTGAGTGGAGCTCTTGCTTATACTGGGTTTCTGAAACTCAGAACAAAATGTATGGTGGAAAATACAAGTTAACTTACTTACTTTTCTGTATGTAAGTTCTTCAAATACAAGTTACTTCACTTATTTGGCTGCTATGTAGCTGTTTAATACTTTAGTGATTTAAGAAATATAGAAGAGAAGTTAACTCTTTTCTGTATAACCAAGGTGGAAAGCATGGAGATTATGTTGGTTCTACCTCTGGCTCGAGTGAGGGTAAAAGTAGGGACCATGTTGACTCATCCTCCCGTTCAACTGAACAGTTGTGGCAAGCCTTCTTTGCTAATCCTCTTGACTGGTGGGATAACAGGACAAATAAGGTAACTTTCTTCTTATTGTTCATTTAGACATTCAAATGCATTATCTTGTAATATATGTTACATGATAAACGGACTAATGGCTTCTGTTCTTGGGTAAACCATCTACCTCCTTTTAGGAGGGTCATATCCTACTAAGTACTGCTGCAAAGATTTGAGAGCACTTCTAATAGTCCAAAACTTCTCAGATAATTAAAATACTACTATATGAAGTATTAATGGTTCATGGAGTTTGGCTGAACATTGTAAAACAGAAACATTGAAGGTGTCAAATACTCAAATGTAATCATGAAGGATAAAAAAAAAAAAGGAAGTTGCAACATAGTCAGCATAGCGATGTGGCTATATTGTTATTTGAGTCATGCAATTGTTTTTTGGGGTTATTTCTAGTGTCTTGTAAAATTGTAGAAACCACCCAATCCTGAATTTATAAACAAGTTCAGTATAAATGAAATATTTATCTGGTTTTCCATCAAGCCAGCATATATGCTGTAGGTTACTTGAAAAACCTGCTTGTCATATACATGGGTTTGCTTCAAACCATAAAACTGAACATGCTCTTGTTGCATCAGAATAAGTTTCAAAGTATTCTTTGTTATTCCCTCCAAAGAAAGTATTTTTAGTTGTGTGGCACAACTAGTGCAGACTAATTAATAGCTAGATGCCTCAGTGCAACCATGCCAACCACTTTTGGTCAGGGCACTAGTGGAACAAAGAAATTCTAAAATAAGTAGATGGATAATCTATAGTGAATTGTGAAGTAAAACATTTTTGTATTAGGAGAAACAAAGGAGTTGCTGTGAATTGTCAATCCTTAGTTTTTCCTTTATTTAGTTTGTCAGAATTTAGCTGTTTGTGTTTCTCCTAATTTTTTTATTGAATTTAATTTTGATATCTGTATGGTGGTCTGACCTCAGTACTATTTTAAACTCTTTTTAATTTTGCTTTCCAGATTGACTGACCAATTTGAATTCATTCTTACAGTCAACTATTGTTTTGCATTAAATATCTGTCCAGGAATTATACTCCCTCTTTTGCCTTTTCACTCTCCATTTATGATTTATGAAATATTGCCATGGGAGTAATAGGGACTACTTTGTTTGATTTATTACTGGAGAATCTCCAAATGAAGCTACTTTTCTTGCATTTGTCTCGCGATAACTTGCAAAAGGGTTACCATGCTGTATCAGATTGTGAAATCCCATGCCCTCTTTCTTCCACAAAGCTTTATCATGGAAGTTGGTTGCAGTTCTTATTTGTGCATTTATTTGTTTGGTCAATAATTCAGGTTCAATACATGTCTTTTTCAAGATGTTCTGGAGATTTGTTTTAATAATGAATACGTACTATTTATGGCTACAATGTCCCTCTTATGCTACATTTTCACTGATTGGTGTGCATGTATGAACAGAAGAACCCGAGGTATCCAGACTTCAAGCACAAACACACCGGTGAAGCATTGTGGGTTGATGGGAGGAACAATCCAAATTGGGTTATCTCCCAGTTGGCAATTCTGGACTCGAGAATGGGTTCTCTTCAAGGCAATGATAGGAAACCAGTTGCCTTTATGTATGCTGATGACTTCATGACACCTGACACCGACACTGAAGCCCATATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010194