BGIOSGA010213

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Revision as of 09:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010213| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010213, complete gene.| tag = OsI_126...")
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Gene Name

BGIOSGA010213

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010213, complete gene.

LocusTag

OsI_12681

Ensembl Transcript ID

BGIOSGA010213-TA

Ensembl Protein ID

BGIOSGA010213-PA

Length

5889

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:27641000..27646888

Sequence Coding Region

27646476..27646888,27644425..27644761,27643346..27643570,27642743..27642875,27642342..27642514
,27641683..27641747,27641000..27641054

Genome Context

<gbrowseImage1> name=IndicaChromosome03:27641000..27646888 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:27641000..27646888 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCTCGTCCGCGGAAGCGGGTCTCGCGGCCCAAGCCACGCGCCACCTCCCGCGGCCGCGGCGGCGGGGATGAGGACCCCTTCTTCGAGTCCGAGCCCAAGCGGCGCCGCGGGGGCGGCCGCGACGAGGACATCGAGAGCGAGGACAGCGACCTGGAGGGCGTGGCAGCGGCTGCTGCTGGTGGCGTCGGCGACGATGGGGAGGAGGAGGAGCAAGAGACGGCGGGGGAGAAGAAGATGCGGATCGCGAAGGAGCTTCTCAAGAAGGTGACGGACGCGGCGAGGAGGAGGAGGGAGGATGACGAGGACGAGGACGAGGATGAGGAAGCCGGCCGGAGGCGGGTCGCCGATATCCTCCTCAAGAGGCAATTCGAGGAGAGTGGCAGGAAGCGGATGGAGCTCGCCGACAGGATATTACAACCAGATCCTGAGGATGGCTTTAAGATGCTCGTGAAGCACCGACAACCAGTTACTGCTGTTGTTTTATCCAAGGACAGTGATAAGGGATTTTCAGCATCAAAGGATGGAGTCATTGTGCATTGGGATGTTGAAACTGGAAAAAGTGAGAAGTATTTATGGCCAAGTGAAAATGTCTTGGTTTCTCATCATGCTAAGCCACCTCTATCAGCTAAAAGAAGTAAGCAAGTATTAGCTCTAGCTGTTAGTGCAGATGGTCGTTACTTGGCAAGCGGAGGTTTGGATCGTCACATCCATTTATGGGATGTTCGGTCACGGGAGCACATACAGGCATTTAGTGGTCATCGAGGAGCAATATCTTGTCTTTCCTTTGGACCAGACTCATCGGAGCTATTCTCTGGTTCTTTTGACCGTAAAATAATGCAGTGGAATGCAGAAGACAGAACGTACATGAACTGCCTATTTGGCCATCAGAACGAAGTCTTGACAATGGATGCACTTAGTAAAGATAGGCTTCTGACTGTAGCACGGGACCGAACAATGCATCTTTGGAAGGAATTTTTAACTGGATCTGATGATGGAAGTGTTGAGCTTTGGAGCATTATGAGAAAGAAGCCTACTCACATAATAAGAAATGCTCATCCAGTATTCCGTAACAACCTTAATTCGCTTGAAAATAATGTTGAGGAAAATGGCATACATAAACCTGAAAGTGTCTCATCAGCCCAATCATGGGTTAGTGCTATTGCTGCAAGAAGAGGTTCTGATCTTGCTGCATCAGGAGCAGCAAATGGTTCAGTTCGTCTTTGGGCTATTGAACCTGATTCTAAGGGCATTCGGCCATTATTTAGTTTGAGACTGGATGGATTGTTAATTCTCTCGCCATCCCGAAATCTGGACGCTTTATTGTTGCTGGTGTGGGCCAGGAGCCTCGTCTTGGAAGATGGGGCCGTGTCCGATCAGCTCAAAATGGAGTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MAPRPRKRVSRPKPRATSRGRGGGDEDPFFESEPKRRRGGGRDEDIESEDSDLEGVAAAAAGGVGDDGEEEEQETAGEKKMRIAKELLKKVTDAARRRREDDEDEDEDEEAGRRRVADILLKRQFEESGRKRMELADRILQPDPEDGFKMLVKHRQPVTAVVLSKDSDKGFSASKDGVIVHWDVETGKSEKYLWPSENVLVSHHAKPPLSAKRSKQVLALAVSADGRYLASGGLDRHIHLWDVRSREHIQAFSGHRGAISCLSFGPDSSELFSGSFDRKIMQWNAEDRTYMNCLFGHQNEVLTMDALSKDRLLTVARDRTMHLWKEFLTGSDDGSVELWSIMRKKPTHIIRNAHPVFRNNLNSLENNVEENGIHKPESVSSAQSWVSAIAARRGSDLAASGAANGSVRLWAIEPDSKGIRPLFSLRLDGLLILSPSRNLDALLLLVWARSLVLEDGAVSDQLKMEL</aaseq>

Gene Sequence

<dnaseqindica>1..413#2128..2464#3319..3543#4014..4146#4375..4547#5142..5206#5835..5889#ATGGCGCCTCGTCCGCGGAAGCGGGTCTCGCGGCCCAAGCCACGCGCCACCTCCCGCGGCCGCGGCGGCGGGGATGAGGACCCCTTCTTCGAGTCCGAGCCCAAGCGGCGCCGCGGGGGCGGCCGCGACGAGGACATCGAGAGCGAGGACAGCGACCTGGAGGGCGTGGCAGCGGCTGCTGCTGGTGGCGTCGGCGACGATGGGGAGGAGGAGGAGCAAGAGACGGCGGGGGAGAAGAAGATGCGGATCGCGAAGGAGCTTCTCAAGAAGGTGACGGACGCGGCGAGGAGGAGGAGGGAGGATGACGAGGACGAGGACGAGGATGAGGAAGCCGGCCGGAGGCGGGTCGCCGATATCCTCCTCAAGAGGCAATTCGAGGAGAGTGGCAGGAAGCGGATGGAGCTCGCCGACAGGTGAGATCTTCTTTCCCCCCCCCCCCCCCCCCTAAATGTCGGTGGGAATTGTTTGCAAATTCCAACTTGCAGCCTCCTCTCTCTCTTGTTCTATGTGGACAGTAGCTCTGAATGTTTGCGCCCGAATTTTACACGACAATTTCGTCAGTGGTCACAGTCAACGAAATTTACACGACAATTTCGTCAATGGTCACAGTTCATAACCTGAAATGAAGAGGACATGTATCTCTGATGTTTTAGGGTAGCAATTTGGATCAGAGTGAGGTTCCATTGTCTGTACTAATTGATTAGTTCCAAATTAATAGCCCTTTGCGTTTTGCGAGCGACAAGCACACGGGTCAGGTTACATGTATGCGTTTGGGGTTTTGCTTAGGTACATAGGTGGGTGCTTTTAGGGGTGGAATATGGACAACATTCCTGCTAATATATGGTTATCTGAGTGTGGTGGTACAATGATATATCCTCATGGAGGGAAATAAAGGGCTATAATCATGGAGAGAAATAAAGGAATACACTGGCTTGAACCAGTAGGTTATACTATGTGGAAAGAGTATTTATTTTCATGTTAACTTCGCCAAGATCTTATGTTATTGGCTTATTGCTTATATAAGACCAACCGAACAAAATGCATCGAGGGGAAAATATAGAGTTAACAACAAACTAGAGATGTCCTGAAACCAACCATTAAAACAGCCTGGTTGCCTAAAACTGTCCTGGATCCTCTAAACTTTCTAAAACCTCGTATTTATTCTTGATTCTTGTTATCTTGTAATTTTCTGCTTTCAACTTTTTGTCATATATTTGTATTACACTGATCTTACTTGCAACATAGGAGTTAGTTTCGAAATACATGTGAAGTTCTTGTTGTGAATGATGCACTCTTGGCCTCTTGGGATTCAAGCAGTTGTCCTTTTATGGCTCCAGCAAGTGCATTGGTGGTACTGAATTGGGACATCCAAACAACTGTATATTCAAATGTTTCTGTTAGAACCAAACATGAGAGGAAAATCGTTTATAGTCACAAGTAGTGGGATGTGCCATAATGGAAGAAGAAAGTTGGAGTTCACATCTACCCCTCCTCTTCCGCTTGCTATTGATTTTTTTTGCAACCTGTACACTTTGGCATAATGTTAATTTACGCAGAATCTGCTACTCTGCTTATAGACAGTAGTTCACAAACTGGGGCGGTTAAAATATTAGGAAATATTGCTTGCTACATGATTATATATGCCCTCAACACCTGAACCATATGGCATTTATTTTATCTACAAAATTAGATGTGTTTGCATGTGGAGCTTCTTCCAATAATTTCTCATTTGCCATCCCCATCCATTTACTTTTTACTTAGGTTGTATTCTCAATTCATGCGTGATCTATTTGGATAATGTTCCAAAACTAGCATGCTGAAACGGAATGAAACGTGAGCGGAAGAACTATACACATTTAGATGGCTCGGGAATGCATTTGTCATCATGATTACTGAAGGTTCTATCCACAAGTCACTTGTATATGACATCAGTTATCTGGGTGTGGTAACTGTCTACAGCTGTTAAAAGCTATATAAATATGATAACCTTTTAATTGAATCCATCTTTTTTTTTAAAAAAATCTCTAACTAAAAGGTGCAATAAGATAATATAAGTGTTCTTGAAATACTGATCACATAAATGGTGAGGTTAAATAGATATGACTAAAATTTGCAAAACTATTGCAGGATATTACAACCAGATCCTGAGGATGGCTTTAAGATGCTCGTGAAGCACCGACAACCAGTTACTGCTGTTGTTTTATCCAAGGACAGTGATAAGGGATTTTCAGCATCAAAGGATGGAGTCATTGTGCATTGGGATGTTGAAACTGGAAAAAGTGAGAAGTATTTATGGCCAAGTGAAAATGTCTTGGTTTCTCATCATGCTAAGCCACCTCTATCAGCTAAAAGAAGTAAGCAAGTATTAGCTCTAGCTGTTAGTGCAGATGGTCGTTACTTGGCAAGCGGAGGTTTGGATCGTCACATCCATTTATGGGATGTTCGGTCACGGGAGCACATACAGGTAGTTAGTACAGCAATTTAACAATAACATGTTGTAATTTAAATTTCTGATGATATACAGTTGAAAAATGCAATTTTGCTTGCATCCTTGGACCATGTGATTGTCGTTTTGCATTGTGTTTATATCTGTACATGTATTGCCATGCCTAATTCTCACCTGACAGTCCTGTCCAATAGCTGTTGCCTTATTGATCAACCTACAATATTGTGTAGGTAAAAAAGCAAGTGCATGATCAAATGCTGCTTGCAAATCTATATAGCACTACAGATAGCCTGGTTTGCATATACCCCATTCTTCACTGGTGCATTTGTTTTGTTATTCTAGCTGGTGCCAGGTTGTTGCAACGCTTGAGCACGGAAATATTATTCAATTACTAGCTTGTTTATTGTCAATGCAACCTGTAATAGAACACCTATTTCAATGCTTTATCAGAGATTCACAACAATTTTCTCTGATACATATGAACATATTATTCAATTAAACTGAAAATTAAACTGAAAGGTTGCTATAAGACTTCCATGGACTGCATAGATTTTATTTTTTTGTGGTCCACAGAGGAAGTATTTGAGCCATGTTATTTGTTAGACTTCAAATATTTAGTGTTTTGGTTGCAAAATAGATATACTTTTGTATATATTTTAAGCCACCAAGAAGGCAATGTAGAATCTCGGAGTGGTATTCTTCAGGGGTAGAATGTATTAGTTGATCTAAACTAGCCATAATTGTTCCGGGATATACACTGCATTTTTTCTTACTGAAAAGAGAGTGCCGAAAAATCAGTGTAACCTTGCTTGCAGTTTAACTGAGCTCTTCTTATTGGTGCCATAACCGTCTGTTTTGATTATTTTCATCAGGCATTTAGTGGTCATCGAGGAGCAATATCTTGTCTTTCCTTTGGACCAGACTCATCGGAGCTATTCTCTGGTTCTTTTGACCGTAAAATAATGCAGTGGAATGCAGAAGACAGAACGTACATGAACTGCCTATTTGGCCATCAGAACGAAGTCTTGACAATGGATGCACTTAGTAAAGATAGGCTTCTGACTGTAGCACGGGACCGAACAATGCATCTTTGGAAGGTACATCTTTCCTTAAAAGTGTGTGTATGCACATGCACTAAGATTATTTACATATTATAACTGAAAGAAACTGTTTAGTTAAACATTGTTCTAGGATTAAGATACATAGAAATATTATTTTCCCATTGTTCATTATGGTGCGTGACTAACCAAAATTCACATATTGTTTGTGAATCCCTAATAATGTTATAATATTATGGAAGTATGTCTCTTAAAAAAATCTACTTGTACCGTATCATTTTCAAATGGGAAATCTAAATAACCATGATGATGCTGACCAAGGTAAAACTGATTGGACCACATGAATTTAAGGATATGACGCTTAGACTGGCTTGACTCTGGTGTGTGACTCAGTATTTAACCTGAAAGTTGAAAACTCTTGTGTGGACAGATACCAGAAGAATCACAACTACTGTTCCGTGCTCCTGCTACTGCATCATTGGAGTGTTGCTGCTTTATTGATGACCAAGGAATTTTTAACTGGATCTGATGATGGAAGTGTTGAGCTTTGGAGCATTATGAGAAAGAAGCCTACTCACATAATAAGAAATGCTCATCCAGTATTCCGTAACAACCTTAATTCGCTTGAAAATAATGTTGAGGGTAAGATGCTATACGAAGAACAGTTTACTACTTCATGCAAAGTTTTCCTATACGTTGAGTTTACATCTGTTTTATTTTCACCTTTTTTCTCGTTCTGTTATTATGTAGTTCTTTTTGTCGTTGAGATGTCAATCAATTTGATTATCAATTTTCATCATCACCACAGTATTTTTTTTTGTTCTGTGTGTATATGTGTTTCTTATCTATTGCTTTGCACCTCAAATGCAGAAAATGGCATACATAAACCTGAAAGTGTCTCATCAGCCCAATCATGGGTTAGTGCTATTGCTGCAAGAAGAGGTTCTGATCTTGCTGCATCAGGAGCAGCAAATGGTTCAGTTCGTCTTTGGGCTATTGAACCTGATTCTAAGGGCATTCGGCCATTATTTAGTTTGAGACTGGTAAGCTACACTAGCTACTCCATGATACCCCTTTGGATGTTATTATGAAAATAAAATGCACCATAGATAAGCTACCAAGGTCCCAAGACACCTCTGACTGTTTTGACTTGGCATTACTGGAATTTATTGTCTCAGTTCTAGGTCCTTTGGGATTTTTAGTTGATTGTATAATCATATTAGTTACGTTCACTAACATTTTCTGATTGTTGTACTTCATAGGAGCGTATACTTTGGCCTGATAATTATACTCCCTCGGTTTTACAGCATTTATCAGGACCACCATGGGTCTTAGATCAAGACACCAGATCTAAGAATTAATATGAAATAACTGTGCACCTACTAAATGCCATACTACAATAGTACAGCTGCTCAGCTTCTTTTATGCAATTAATTGAATTGGGTAGAAAATGAAAACATTGCAAATCATGCCTCTTGCTTTCCCCCAATAAATAAACAGTGAAAATGGCACTTTCCAAGAAAAGGGGCAATCGTTTCAGATGACAAGGTTGTGTACTGCCAATGCTAGAAAAAACTGAGTGTACATATTTTTATTGTGGTTGCAAATAATTGATACATTTGTTCTACCATTATCAGGATGGATTGTTAATTCTCTCGCCATCCCGAAATCTGGACGCTTTATTGTTGCTGGTGTGGGCCAGGTCAGTATATTAAATCCCCTTTGTTAATTGTTACAGAAAAGTTCAGTTTTTTTTAACCTTTGATATCAGTATGTTCCCAAGATTATCTTGAGAATGCAACAGGGATGGAAAAACTTAATTTTCCGGTTTAATCATTGACATTAAGTTCTTGAAACTTTTTTAGAGCATGGAAACCCTATCCATTTTCATTGATTACAATGGAAAATATCGCCTTGACTAAAAAGCTTATTACGAGATACTATTCAGCAAATAAAGACTGGGAAGCAGCAACTATATTGAACTTATCTTTCTGGCTAAACACTTAACTGATTGAACTAAAATTCCCACTGTACACAACTTACAACATTTTATTAATAGAAGTAGAGCACCCTATCCTGCTACGTTTTGAAACTCCATGACAGCCTCAAAAGTGAATGCAGATTGCAGAATTGCAGATTCATCATCGCATTCTCTTGTTCATTAGCCGATGAATAGGAATACTACTGCCTTGTAATCCTAGCACTACAAGTGGACCAGATACCATTTATGTTAATCCATTCCATAGTCTTCTATACTGTTGCAACACAGTACTCTTTTTAGTTTCGTTTCAAAATCCTAAATTTTATACTGATATATCTTTTATTACCAGGAGCCTCGTCTTGGAAGATGGGGCCGTGTCCGATCAGCTCAAAATGGAGTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010213