BGIOSGA010222

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Revision as of 09:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010222| Description = BGIOSGA010222| Definition = Oryza sativa Indica Group BGIOSGA010222, complete gene.| tag = | tid = BGIOSGA010222-TA|...")
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Gene Name

BGIOSGA010222

Description

BGIOSGA010222

Definition

Oryza sativa Indica Group BGIOSGA010222, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA010222-TA

Ensembl Protein ID

BGIOSGA010222-PA

Length

2479

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:27426099..27428577

Sequence Coding Region

27428437..27428577,27428004..27428381,27427012..27427072,27426099..27426571

Genome Context

<gbrowseImage1> name=IndicaChromosome03:27426099..27428577 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:27426099..27428577 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCAGCAGCGGCGCTCGTTGTCGTCCTTCTCCTCCACTGCCGCCATGCGCAACATCCAGCGCGACCTCCATGGCACCAGGATGAAGCTCGCCGTCACGCCGATCAACACGTCGTCCGCGCAGCTGCAGCTGCAGCAGCACGCCGCCAAGGCCGCCGCTGACCCAGCTGCTGGCCCGGAGGCCTCGTCGGAGCAGATCATGGAGGCCGGGACGACCGTGAGCGTCCGCACACGGGTGGGGAAGCTTCCCGGCGGGAGGCAGCTGGTGCTGTGGCTCTCCGCGGTGGTGGTCTCCGCCGCCGAGGAAGGCTACCTCACCGTCGTCTACAAGGGCGACTTCCCGCCCGGGGACCCCTTCCAGACCGTGCGCGTCGCGAGGAAGGACACCAAGAAGATCACTGCCGGCGCCGCAGCCGCCGCCGCCGCAATCATCACCGATCCAGCCGCGGCGGCGGCGCGCCCCTCCAGCAACAATGTGGCGGCCCCGGCCCCTCGTCCCAGCACGGGCGGCAAGAAGTCTTGTTGCAAATTCCCTCCAAAAAAGTTGAAAAATCAAGAAGATGGTGAAGGCCCAGCCCTGAACGCGCCGCGCCACGGTCAAGAAGTTGTCCGAGCAGGCGCCTCCGCTCCCCCGCCGCTCTGCCTCGAGCACCCGATCGCCTCGTCTGCCGCGTCGGAGAAGATAACGGTGGGGATGGCCGTGAGCGTCCGCACCCGGGTGGGGAAGCTTCGCGGCGGGAGGCGGCAGCTGGTGCTGTGGCTCTCCGCGGTGGTCGTCTCCGCCGCCGAGGAAGGCTACCTCACCGTCCTCTACAAGGGCAACTTCCCGCCGGAGGATCCCTTCAAGACTGTCCGCGTCGCCGCGAGGGAAGAAGCCAAGAGGATGGCTGCCCCGGCCGCCGCCATCGCCACTTCCACAACAGCTCTCCCCTCCGGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCGAAACTGCCAGCACGTACCGTCTACTCTGCTTCTTCGCGCCCACGCTAATTAACTAG</cdnaseq>

Protein Sequence

<aaseq>MAQQRRSLSSFSSTAAMRNIQRDLHGTRMKLAVTPINTSSAQLQLQQHAAKAAADPAAGPEASSEQIMEAGTTVSVRTRVGKLPGGRQLVLWLSAVVVSAAEEGYLTVVYKGDFPPGDPFQTVRVARKDTKKITAGAAAAAAAIITDPAAAAARPSSNNVAAPAPRPSTGGKKSCCKFPPKKLKNQEDGEGPALNAPRHGQEVVRAGASAPPPLCLEHPIASSAASEKITVGMAVSVRTRVGKLRGGRRQLVLWLSAVVVSAAEEGYLTVLYKGNFPPEDPFKTVRVAAREEAKRMAAPAAAIATSTTALPSGXXXXXXXXXXXXXXXXXXFETASTYRLLCFFAPTLIN</aaseq>

Gene Sequence

<dnaseqindica>1..141#197..574#1506..1566#2007..2479#ATGGCGCAGCAGCGGCGCTCGTTGTCGTCCTTCTCCTCCACTGCCGCCATGCGCAACATCCAGCGCGACCTCCATGGCACCAGGATGAAGCTCGCCGTCACGCCGATCAACACGTCGTCCGCGCAGCTGCAGCTGCAGCAGGTGCCTCCCCTCTCGCGCTCTGCCTCCTTCGACCACCCAATCTTCGCGCCGTGAGCACGCCGCCAAGGCCGCCGCTGACCCAGCTGCTGGCCCGGAGGCCTCGTCGGAGCAGATCATGGAGGCCGGGACGACCGTGAGCGTCCGCACACGGGTGGGGAAGCTTCCCGGCGGGAGGCAGCTGGTGCTGTGGCTCTCCGCGGTGGTGGTCTCCGCCGCCGAGGAAGGCTACCTCACCGTCGTCTACAAGGGCGACTTCCCGCCCGGGGACCCCTTCCAGACCGTGCGCGTCGCGAGGAAGGACACCAAGAAGATCACTGCCGGCGCCGCAGCCGCCGCCGCCGCAATCATCACCGATCCAGCCGCGGCGGCGGCGCGCCCCTCCAGCAACAATGTGGCGGCCCCGGCCCCTCGTCCCAGCACGGGCGGCAAGAAGGTGCGGGTGCTCAAGAGAATTTTCGTTGCACCCTAAGAATTGTCATGTATATATATACTCCAAGAGTTCATTGTGTACTGTGACAGTCTTGTCAAAAACAATCCCCCTTGGGCGCCCCATGCAAAACAGAAAGATCAAGCAGCTTCATATGTCCATCCTCCTATTGACCGGAGGAGACTTTTCGAACCCACTGTCTTATTTTCGTTCTTATCCACTCTTTCTCCCCAAATCCCACCAAGCCACCAAGGCAACCGTGCGAGGTGCATGCTTGTGTGCGCTTCCTGCCTTCCCGTTTCTTTTCTCCCTCCCCATCTCATAGCCATGGAAACCTCCTTGCTCACTGCTTCCGAATCATGCTACGGCTTCTCCCGCTTCACTGGAGCATCCATGCCAACTAAGTGAATTGTACAAGGCAACGGCGGCACCGCTTGCTAGAGCTCCTGTGTTGGTATTTATACCGTTCTGCACCGGCAAGGGAGGGAGGAGGCCAACTCGTTCTCACTATATATCCGGTCTTCGGTTGGACAGAAGAGGGTGGAGATCTGGCCTAGGAGAGGAGGAAGAAGCCATATCGATCTAGGCCGGTACATTTTTGCGATTTTTTTTTACTGTCTCAATCAATGCATTTCGATGTTTTTCTTATGTTGCATCAGAATGTGGCACTGGGTATGTTGATGGTGTTTCACATTTTTTTTCTTCAATTTCTTGTGGATCTATTGATGTTTCAACCGATAAAATCTCGATGTTCCCTGTGTGAGAGTGAAATGTTCAACTATGATTTAACAATGTTCCACTGATTTAATATTATGAGACTTTTTAAGTTTATTGGTGAAACAATTATCTATATCCGATGAAATCTCGATGGTCCCTGTGTGAAACAATGCCCGATGTTTCAAGAAAAATAAGATACCTGATTTATAATGGTTCGCAGTCTTGTTGCAAATTCCCTCCAAAAAAGTTGAAAAATCAAGAAGATGGTGAAGGCCCAGCCCGTGTGCCTCTGTCCTTTGAGTAGGAACCATTAATGGAGCCAATGGACCGAGACCAAGTACGGAGACATACAGAGAAAATCGCACCAAAATCTTTCAGATGTATAACTACTATATCGGCCATTCCAGCTCCTCCACCGGCTAGCTTTCCGGCGCGCACTGCTGACATAGTATCCGGCCGAGGCACCGGCGGGGCCTTTACACCAAGGCTCGTGAGACGAGATCGATCTGGACGAGGCGTGGCGCGGCGCCAACAGGAGGCATACACGGACGCTGCAGGCGAGCGTCATGCGCCGTGGCGTGGCGTAGCGACTGATCAATCCGATCTCACCTCCTTAATCAACATCAAAACCGTTCATGCATGATCTCCCAAATCTTGGAAAAGCCAGCAGCACCACCGGCTACCCTGCTTCAACCCAACGCCCATCCGCTCTGACTTCCAGTGAACGCGCCGCGCCACGGTCAAGAAGTTGTCCGAGCAGGCGCCTCCGCTCCCCCGCCGCTCTGCCTCGAGCACCCGATCGCCTCGTCTGCCGCGTCGGAGAAGATAACGGTGGGGATGGCCGTGAGCGTCCGCACCCGGGTGGGGAAGCTTCGCGGCGGGAGGCGGCAGCTGGTGCTGTGGCTCTCCGCGGTGGTCGTCTCCGCCGCCGAGGAAGGCTACCTCACCGTCCTCTACAAGGGCAACTTCCCGCCGGAGGATCCCTTCAAGACTGTCCGCGTCGCCGCGAGGGAAGAAGCCAAGAGGATGGCTGCCCCGGCCGCCGCCATCGCCACTTCCACAACAGCTCTCCCCTCCGGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCGAAACTGCCAGCACGTACCGTCTACTCTGCTTCTTCGCGCCCACGCTAATTAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010222