BGIOSGA010338

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Revision as of 09:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010338| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010338, complete gene.| tag = OsI_124...")
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Gene Name

BGIOSGA010338

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010338, complete gene.

LocusTag

OsI_12428

Ensembl Transcript ID

BGIOSGA010338-TA

Ensembl Protein ID

BGIOSGA010338-PA

Length

4446

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24758157..24762602

Sequence Coding Region

24762475..24762602,24762251..24762348,24761247..24761504,24761038..24761150,24760684..24760757
,24760456..24760510,24760294..24760386,24760137..24760210,24760001..24760049
,24759610..24759694,24758157..24758365

Genome Context

<gbrowseImage1> name=IndicaChromosome03:24758157..24762602 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:24758157..24762602 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACCCAACCAATACTGAGAATGAGATGACGGGCGGTGATCTCGAGAAAGCAAGTGGAAGCTTACTAGACCAGAGCAAGCAACCGCTGAACATAAAGAGGGATCGTCGCAGGCTAGAAGAAGTCAGTGATAAAATGTGGAAGGATGAAGCGAAGGAGATTGGAAGCAGGTCGCCAGCACTAACAAAGGGGAGCACGAAAGAGTCTCAGATGCTTCAGTCTCTCGATGGCAAAGCAAAAAACGCTCAGAAAAGAAGGAAAGATGCTAAGCAAGAACTCCGCAGCAAGATTCCAGGAGTGACACTGGTTTCTGATGACTCACTGTTTGGGCAAGCAGCTAATTACATCGAAGACCTTGAAGGGACATCACTTGACTTAGAAGGCTTATCTGGAACTGCCATGATCAGAAAAGTTCTTCCTGGTTCAAATAAAATACGAGGTGTTACCGCGCTTTTTGAGGCAGCGAGCAGACATATAACAGAAGTTAAAAAGAAAAAGAAAATTGCCCCTGAAGAAGTTGAAAAGGAATTTCGTCCTGGAGTTGATGCCCATGATGGCCGAGCTGGGAAAAAATTGACCAACATGATTCCCATTCCTCATATTCCAAAAATAAATGGCGATATTCCTTCTGCCGTTGAAGCCTTTGCAGATCACCAAAGACTGCTTGACAGGTTGGTGCTGTATGATCTGGCTGAAGTCAAGGTTAAAGGAGACAGGAATTGCCAGCATGTGTCTTTTACTCAGTTCCGAGCATTGTCAGATCAAATGTACCACACCACCGAACACCACAGGTTTGTTCGTCAGCAAGTAGTGAAACAGCTTGAGTCTTATCCTGAAATTTATGCGGGTTATGTCCCTATGGATTATAGGGAATATCTGAAGAAGATGACAGAGGATGGAGAGTGGGGTGACCATGTTACGCTTCAGGCTGCTGCCGACTTGTATGGTGTAAAGATAACCCTGCTGACATCATGCAGAGATACCTTTTACATTGAAGTTCTTCCTGCTGACCAGAAACCAAAAGGAGCCTTTAAAGGTTTAAAGCATCTCGATTTCGAGGCAAGATTTGTCTCCTCGAACGGAATGTCCACTATCCCCCTTGTTAAAAAGATGGAATTTTCTTCATTACAGGATGTCGGGTCGAGGGAAGAAGAAGAATGGAGTGTCCTTCAATATTCCTTTTACACTGCCGATTTTCACCCGATTGACTTAGGTCTTGTTCGTTTCTCCAACTAG</cdnaseq>

Protein Sequence

<aaseq>MHPTNTENEMTGGDLEKASGSLLDQSKQPLNIKRDRRRLEEVSDKMWKDEAKEIGSRSPALTKGSTKESQMLQSLDGKAKNAQKRRKDAKQELRSKIPGVTLVSDDSLFGQAANYIEDLEGTSLDLEGLSGTAMIRKVLPGSNKIRGVTALFEAASRHITEVKKKKKIAPEEVEKEFRPGVDAHDGRAGKKLTNMIPIPHIPKINGDIPSAVEAFADHQRLLDRLVLYDLAEVKVKGDRNCQHVSFTQFRALSDQMYHTTEHHRFVRQQVVKQLESYPEIYAGYVPMDYREYLKKMTEDGEWGDHVTLQAAADLYGVKITLLTSCRDTFYIEVLPADQKPKGAFKGLKHLDFEARFVSSNGMSTIPLVKKMEFSSLQDVGSREEEEWSVLQYSFYTADFHPIDLGLVRFSN</aaseq>

Gene Sequence

<dnaseqindica>1..128#255..352#1099..1356#1453..1565#1846..1919#2093..2147#2217..2309#2393..2466#2554..2602#2909..2993#4238..4446#ATGCACCCAACCAATACTGAGAATGAGATGACGGGCGGTGATCTCGAGAAAGCAAGTGGAAGCTTACTAGACCAGAGCAAGCAACCGCTGAACATAAAGAGGGATCGTCGCAGGCTAGAAGAAGTCAGGTTAGTGACTTCTCTGCTCCCTTCTTATGCGCAAATATGTATTGTTGGTTGCTCTGTTTGATCTGATAATAACTGTTAGAATTGAGATTATGTTGTTGGTGAATCTGACAAATTGTTGAACCCTAGTGATAAAATGTGGAAGGATGAAGCGAAGGAGATTGGAAGCAGGTCGCCAGCACTAACAAAGGGGAGCACGAAAGAGTCTCAGATGCTTCAGTCTCTCGGTAAATATATTTGAATTTGGGCTTGCTCTTTTGAACTGTGGAGTGGAGTTGATTGGGCCTGTTTTTACTTTTGGTGTGTGTGGATGCACTATCAGGTGCACAAACTGCTAAGAGTTCCAGTGGTTGTCAGGGAAAAAAATGCTAGTGTCCAACTCAATGGCTTCAGGGCAGCCACGGCATCTCTTTTCTTACACCCTATACACCCAGTGTAGTTTGATATCTATATCAGGTCATGTCCAGAGTAACGAGTGGATATTTCAATTAATCAGGATGAAAATTCCAACTAGGTTAATTGCTTGCTCTTGGTTTCACAACTTGTAAATTCTCGTCTCATGCATGGAAACCGTACAGAAACCTCTAATCTAGTTAAGCATGTCAATTCATACTGTAACAACATGCATGATTTCTGACAAGAAACAGAATTCATTGTTTATGTTTTGCTGTTACTTGACAAAACAACAAGCTGATCCTCCCTAATTTCTTGTAAAATGGTATCTTGTTGTTTTGTATCATGTTAAGTAATAATTATGTAACTACAAAAGGATTATTGGAAAGTGATTATTTTGCCAATTTGGAAAGGGAACGTTCACACTCTCAGTGTGCAATTTTGTAGATGAAATTGACTCAACATCAGTACCTGAAAATTGACTTTGAAACTGTGGTAACCCTTGGAACACTTCAATTTTACCTCCAAAATGTGTCCGCACCCCACTTAACATGCCTTTTCCAAACATTTCTTCTTGTAGATGGCAAAGCAAAAAACGCTCAGAAAAGAAGGAAAGATGCTAAGCAAGAACTCCGCAGCAAGATTCCAGGAGTGACACTGGTTTCTGATGACTCACTGTTTGGGCAAGCAGCTAATTACATCGAAGACCTTGAAGGGACATCACTTGACTTAGAAGGCTTATCTGGAACTGCCATGATCAGAAAAGTTCTTCCTGGTTCAAATAAAATACGAGGTGTTACCGCGCTTTTTGAGGCAGCGAGCAGACATATAACAGAAGGTAAGTAGGTAGAATACATTCGGATATGATTCAAGAGCAAATTTCTGCTGACTTCTTTAACCTTTAATTTTCCTTGTATCCACTACGCATTTGCAGTTAAAAAGAAAAAGAAAATTGCCCCTGAAGAAGTTGAAAAGGAATTTCGTCCTGGAGTTGATGCCCATGATGGCCGAGCTGGGAAAAAATTGACCAACATGATTCCCATTCCTGTAAGTATTTATTCCCCACCGACGATTGAGCATATGTGCTCAGATTGAGATTCTTCTTGATGCTAGTTATCAGACAGCTCTCAATGTCCTACTTATACATGGAAATTATTTGCAAGCATTGGTATATTTTTTACTTAGTTCAGTTGTCAGTCTGCTTTGGTTGGAAAACCTGTATCTCCAATTCTCCTCACCATCACCAAGGAACTTGTTGTGTTCCTAGGCGTTTGGTTATCTTTCATGTTATATCTCAAAAGTAACTTATGTCCCTCTGTTATTGTAGCATATTCCAAAAATAAATGGCGATATTCCTTCTGCCGTTGAAGCCTTTGCAGATCACCAAAGACTGCTTGACAGGTAAATAGCCCTGTAGTATATTTTTAACTGTATTTCCAAATCTACGACCGATAGAATGTGAACCTCATGGCAGCTTTTGTATGTTCAGTGTTAGTAATGTGAGTCACCATAGGTGTTTCACTTAATGTTGCTTCTAAAATTTGACTCATGGCACGATGTGATTTCTTATTTAGGTTGGTGCTGTATGATCTGGCTGAAGTCAAGGTTAAAGGAGACAGGAATTGCCAGGTATACTTAAAATATCTAGCCATTTCCCTTTTCCTTAATTTTACTACATGTTGTACTTATCTCTTTTAGCATGTGTCTTTTACTCAGTTCCGAGCATTGTCAGATCAAATGTACCACACCACCGAACACCACAGGTTTGTTCGTCAGCAAGTAGTGAAACAGGTTAGTGTTGGTGCAGTCATCATGTTTTCTTGTTAGAACTCTACTTGTCCATGCTCATGTTTCCCTTTTGAACTGTTCCACAGCTTGAGTCTTATCCTGAAATTTATGCGGGTTATGTCCCTATGGATTATAGGGAATATCTGAAGAAGATGACAGAGTAAGTAATTGCTCTTTTTGTAACAAGAAAATCTTTGTTATAGTGTAACATTATGCATTTAAAATTTGTTGCCACAAAATCGACCAGGGATGGAGAGTGGGGTGACCATGTTACGCTTCAGGCTGCTGCCGACTTGGTAAACAAGATGTTTCCTCACTTCCTGAGTTGTTAAATAAAAATTGCTGTCTTGTACATTGGCCATATTATGAAGTATACAGATCAATAGTTCTTTGTATTGGACAGTATGGTTGGAGATTCATTAATTGACAAATAATCAAAAGAAATAATGCTATTTTCTGTGGTTTTTATTTTGGTAACCAGCATGTCTCAACAGCTATATTGCAATCTTGTGCATCTTAGGATTATGTGAATGATCTAGGGATGTTGTATGTCGATCCTTGTTATAAATGTGAAACTCAAGTATCCGCATTGGTTTTTGCAGTATGGTGTAAAGATAACCCTGCTGACATCATGCAGAGATACCTTTTACATTGAAGTTCTTCCTGCTGACCAGAAACCAAAAGGAGGTAGCCTTTTTTTTTGGCAATTGAATTTTTACTGCAATTAATATACTAACTGCACTGTTCTTAGTTGATTTGCCTAGTAGGTCATACTTACTTGAGTAGATGTGTATCTGATGTATTTCTGTTTATTTTTGTTTTCTCCCAAAACCCAGAGATATGCATTAGTTTTTGGGCTGAGGTGCACTACGATTCGGTATATGCAGAAAAAGGTACAGTTTGTCGTTTTGATACAGTGTTCTTCTAGGAGTTCTAGTATCTCTTTGGCAGGTTGATGCTGTAGCTCATGTGTGCAAGTTGTGGTGCAGCCAGTTGATCCAGTTCTGTTACAACCTAGTCGTCGGCGAGGAACTGCGACGCCCGGCGAGCAGGAAGAACTTTTATTCTAGAGAATTGAGAGAAAAGCAGAAGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTTTTCTTACATTTTCAATTTGTATATATACGCTACAGCAGCTGGAGATTTATATAGTCAGCACTCGTTTGCCCTCTGGGCCCCACACAGTAGACTCACACAACTAATACGCTTTCTTTACTTGAAGATGCCTTTCCCCGTTACGCCTTGCTCTGTTCTTCCTCCCCGCAATAACGTGCTGCTCTATTCTCCCAGCTATGCCATATAAAAGAAAAGGAGGAGGCAATCTCTAGAGGAGCAACTACAAATTAAAGAGCCATTTAATTTCTTGTTGGTCAGAGATCATTGGCCTGTTGCTGTTGGGCTACGATGTTCATTTTACTTTCCTGTTCTTAAAGAGATGTTCAGTAACTGCCCGGGAACACTTACTGTACAGATACATCTTTGGTGAATATAGTATATGGGCCAATAGTTTCATAGACCTTTCGTTCCATGGCGATGTGCAGCGATAGGACCGAGCCGTTCCAACCATCATGCGAAATTCGTTGTCCTACACAAATCTCCTTCTTAAGTCGTCGCTGTTTCACGGGGATGCCGTTTGGTGACGCCGGCCCACATTCGAACATGCAGTCAATGGCTCTCAAAAATGTCCATCCCCCAATACCCCCCATCACTCTCTGTGCTCCCCCATCTGGGTCTTTGTCAAAAATTCCTTCGTTGGGTGTGTGTTCATATCGGTTCAATGTTCTAATTTGTCCCTCTGCATACATCATTCCAGTTCGGATGCATTGTATCTATCGCTCCCTGCACAGCCTCACAACCTTCATACATCTACAGTTCTTTTTGTTCTTGTGTTTAGCCTTTAAAGGTTTAAAGCATCTCGATTTCGAGGCAAGATTTGTCTCCTCGAACGGAATGTCCACTATCCCCCTTGTTAAAAAGATGGAATTTTCTTCATTACAGGATGTCGGGTCGAGGGAAGAAGAAGAATGGAGTGTCCTTCAATATTCCTTTTACACTGCCGATTTTCACCCGATTGACTTAGGTCTTGTTCGTTTCTCCAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010338