BGIOSGA010550

From RiceWiki
Revision as of 09:17, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010550| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010550, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010550

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010550, complete gene.

LocusTag

OSJNBB0108E08.1

Ensembl Transcript ID

BGIOSGA010550-TA

Ensembl Protein ID

BGIOSGA010550-PA

Length

3085

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18805315..18808399

Sequence Coding Region

18807486..18808399,18806560..18806680,18806325..18806396,18805861..18806034,18805315..18805404

Genome Context

<gbrowseImage1> name=IndicaChromosome03:18805315..18808399 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:18805315..18808399 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCTCAAGACGCTGCAAGTTCCATCTAGCTTTGCAAGGCCGATCAACCGCAGCTTCATCGGTTCTTCTTCTTCTTCGTCGTCGTCGTCTCAGTTTTCTCTGCGGCCAAAGCCTGCATCGGCACGGCTCGCCGCAAGTGTCGCCGGAGAGAGGCGCCTCGAATGCAGGGGCGGCAGCAGCCTGCACGGCTGCGTGGACGAGGGCGCCGCGGCGGCGTCGAGGAGGCGGCAGGAGCAGGCGGTGGAGATCCCCATCGTTCTGTTCCCGTCGGTGGTCTTCCCCGGCGCGACGGTGCAGCTCCAGGCGTTCGAGTTCCGGTACCGGATCATGGTGCACACGCTGCTCCAGGAGGGGGTCACCAGGTTCGGCGTCGTGTACTCCGGCGGCGGGGTGGGGGGCGGGGTGGCGGCCGGCGAGGTGGGGTGCGTGGCGCACGTGGTGGAGTGCGAGCGGCTCGTCGACGGCCGGTTCTTCCTCACCTGCGTCGGCGGCGACCGGTTCCGCGTCGTCGGCGCCGTCAGGACGAAGCCGTACGTGGTCGCGAGGGTCCAGCCCCTGGCCGACGCGCCGCCCAGCCAAGAACGCGGCGGCGACGGCGGCGGCGACATGGTGCGCCACCTCGTGGAGCGAGTGGAGGAGCAGCTCAAGAACGTGGCGGCGCTGTCGGACAAGCTCGGGTGGAGCCGGCCGCCGCTGCCGTTCCGCGCGACTTGCTCCCCGTCGTCGCTGTCGTTCGCCGTGGCGAGGGAGGTCGTGGAGGACCGGGAGGAGCAGCAGGCGCTGCTCCGGCTGGACGACGCGGCGGCGCGGCTGGCGCGAGAGGGGAGGTACCTGGAGCGGAGGAGCAGGTACCTGGCCGCCATTGCGGCGATCAAGGACGCCCTCGGTGGCCACCTCTACTGCAACGACAAGCGGCGTCTTGAACCATTCGATGGGCTACAATCGATAAGGAAGCGATCAGACGTGGTGCTCGAGTCAATGGCGGTGGAAGCAAGTGGTGATTCAATCGATGGTGTCGGACATTTTGGGCAGGTGTTTGTTATCTTCCCCGTATTCTATAGGGTAGCTCCAATTGAGTTGGAGAGTGTCGCATGCCTGAGACGGGCTGGTGCCACAAGCCACAGTCACCGCTCTAGGCTCATCGAGGGTGCTGCCAGCAAGCCCATGCGAGGAGGATGCCGCAGGCGTCGCGCACACCACAAGGCGGTAGGCACAGGTGATCACCCTCACTTCCTTCGCGCTGCAATTGTCATCGGGAGGGTGGAGAACAAGGCGACCATTTTGCTCTCGATTGAGCTCTTCTCAAAATTAAGGATTTCTCGATTGAAGAGGCCACTGGGCGACTGTGCAACACCAAAGACAAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MALKTLQVPSSFARPINRSFIGSSSSSSSSSQFSLRPKPASARLAASVAGERRLECRGGSSLHGCVDEGAAAASRRRQEQAVEIPIVLFPSVVFPGATVQLQAFEFRYRIMVHTLLQEGVTRFGVVYSGGGVGGGVAAGEVGCVAHVVECERLVDGRFFLTCVGGDRFRVVGAVRTKPYVVARVQPLADAPPSQERGGDGGGDMVRHLVERVEEQLKNVAALSDKLGWSRPPLPFRATCSPSSLSFAVAREVVEDREEQQALLRLDDAAARLAREGRYLERRSRYLAAIAAIKDALGGHLYCNDKRRLEPFDGLQSIRKRSDVVLESMAVEASGDSIDGVGHFGQVFVIFPVFYRVAPIELESVACLRRAGATSHSHRSRLIEGAASKPMRGGCRRRRAHHKAVGTGDHPHFLRAAIVIGRVENKATILLSIELFSKLRISRLKRPLGDCATPKTS</aaseq>

Gene Sequence

<dnaseqindica>1..914#1720..1840#2004..2075#2366..2539#2996..3085#ATGGCCCTCAAGACGCTGCAAGTTCCATCTAGCTTTGCAAGGCCGATCAACCGCAGCTTCATCGGTTCTTCTTCTTCTTCGTCGTCGTCGTCTCAGTTTTCTCTGCGGCCAAAGCCTGCATCGGCACGGCTCGCCGCAAGTGTCGCCGGAGAGAGGCGCCTCGAATGCAGGGGCGGCAGCAGCCTGCACGGCTGCGTGGACGAGGGCGCCGCGGCGGCGTCGAGGAGGCGGCAGGAGCAGGCGGTGGAGATCCCCATCGTTCTGTTCCCGTCGGTGGTCTTCCCCGGCGCGACGGTGCAGCTCCAGGCGTTCGAGTTCCGGTACCGGATCATGGTGCACACGCTGCTCCAGGAGGGGGTCACCAGGTTCGGCGTCGTGTACTCCGGCGGCGGGGTGGGGGGCGGGGTGGCGGCCGGCGAGGTGGGGTGCGTGGCGCACGTGGTGGAGTGCGAGCGGCTCGTCGACGGCCGGTTCTTCCTCACCTGCGTCGGCGGCGACCGGTTCCGCGTCGTCGGCGCCGTCAGGACGAAGCCGTACGTGGTCGCGAGGGTCCAGCCCCTGGCCGACGCGCCGCCCAGCCAAGAACGCGGCGGCGACGGCGGCGGCGACATGGTGCGCCACCTCGTGGAGCGAGTGGAGGAGCAGCTCAAGAACGTGGCGGCGCTGTCGGACAAGCTCGGGTGGAGCCGGCCGCCGCTGCCGTTCCGCGCGACTTGCTCCCCGTCGTCGCTGTCGTTCGCCGTGGCGAGGGAGGTCGTGGAGGACCGGGAGGAGCAGCAGGCGCTGCTCCGGCTGGACGACGCGGCGGCGCGGCTGGCGCGAGAGGGGAGGTACCTGGAGCGGAGGAGCAGGTACCTGGCCGCCATTGCGGCGATCAAGGACGCCCTCGGTGGCCACCTCTACTGCAACGACAAGTAGAGACGACGACGATCGAGTGAGTACTCCGTTAATAACCGGCCACTGGTGAGGACTCCCATGGCCATAGGTTTCTTTGGTTTTGTTTGGCTTCTCTGCTTCAGAATTCAGAGTTCAGAGTTCTAATGTAAATATTTTTGTAAGTTCCTCGAGCTGTTTTTTGTGGTGAAAACTTTGCATTGAGTAGATGTATTTAGGAGTACTTCATAATGTACAGAAGGATTGATGTACCATCTGCAGGTTACTCATCAGGTGATAAATAAGAGTACACCATGTAACATTGTAGCAAAAAAAAAAAGAGTGAGAAATCACACAAATGTTTGTGCAAGGTCCAGTCAATTGAACACTCGCGCTTACACCTGAAGTTTGCACGCTGAAAGCTTATATTTTCGATCCGGATTCAGATTCGGATTCAAATGTTTTGATATGAAGTATTTCTATGCTAAAAGTTTCTATGTATAAACATTACAGGTACTAGCAAAGTATCCCCAGATATATGTTTCGGCTGAACTCCATTAACAATATCGTGCATCGGTGTTGTTATCATGTTTAGATCTCCTATGGCGTTCTACTGCGTTTTTTTATTTAAACGTTCTACTGTGTTTGGTTGCTAATGTCAATTTTGTTGCCGATTTTATAATAAGTGGTATCGGAACCTAACCATGGAAAGAGATCCAAGGCAGAGGTAATATGGAGGTGCCCCACACCGCGACTACTCCACATAATATCCAAGGAGGGACATTGACGCAAGGTGGAGCTCAACGGCGATATTACTGAGTTTGATTGGTGGAGTCGAAAATTCAGGCGGCGTCTTGAACCATTCGATGGGCTACAATCGATAAGGAAGCGATCAGACGTGGTGCTCGAGTCAATGGCGGTGGAAGCAAGTGGTGATTCAATCGATGGTGTCGGACATTTTGGGCAGGTAGCTCGAACTTTTAAGTGAGCTACTTTCAACGGGGAGATGGTTAGAAGTGATACTTAGTGTTGATTGAAGCTAGAGGCGATCACGATTTTGTTGCCCTTGCATTTGTAAATTTGTGCCTGCAAGTTTGTTAAGTTATTAGGATTCATTTCATGCATGTTAGGTGTTTGTTATCTTCCCCGTATTCTATAGGGTAGCTCCAATTGAGTTGGAGAGTGTCGCATGCCTGAGACGGGTGAGTTCACGTCAAACGAGTAGTATGCAACTTGTGCGCCACAATCTGACAAGTAGGATGGCGCTCAATTGTGACAGGTGGTGGAGCAAGCATATCAACTAATTTGTTAGGCCATGTTCCTGTATTTGTGTCAAATAAAAGAAAGAAGAAATCTCTACATCAAGTTTAAGCAACACCAAAACTTTTTCTCCTCTGAATTTAGCTTTGATCATCTTCGAGTGTTTGTTCATGAGCTATGAGTGCAATCCTATGATTTGCTAACAAGTGGTATTAGAGCAATATCGGCTCAGGCTGGTGCCACAAGCCACAGTCACCGCTCTAGGCTCATCGAGGGTGCTGCCAGCAAGCCCATGCGAGGAGGATGCCGCAGGCGTCGCGCACACCACAAGGCGGTAGGCACAGGTGATCACCCTCACTTCCTTCGCGCTGCAATTGTCATCGGGAGGGTGGAGAACAAGGCGACCGTGAGCTCACGGACAGACGGATGGTGAAGGAGGTGTTTGGGGGAGGGGAAGGGGGTGGATCAGCATACTACCCCACCCTCATGAAGACAAACTACTGCGAAAGCCATGAAGGTGATTGTACAGTCCGGGGGTCTATGGGAAGGCGTCAAATATTGTGATGTTGAGTTTTAGGAGGACTGGATGGCATGGGAGACCATTCTCCGGCCATCCCGATGGACATGCTCTCAACTCTCGCACACATGGAACTCCATCAAACTGATGCAGGTAGGTGTGATCGTGTGCACAAGTCCAAGGCGCATATTCTCCTAAAGCAGTACGATGCGATCAAGTTCAAGGATGACAAATTTTTCGAAGAGTTCTCACTTTGTCTCAATGACCTCATCACCACGAGCGCCACCCTCGGTGCCCGAATTGAAAATAGTAAGGTTGTTCAAACTTCCTCAACGTTGTCCTCAGATTTTGCTCTCGATTGAGCTCTTCTCAAAATTAAGGATTTCTCGATTGAAGAGGCCACTGGGCGACTGTGCAACACCAAAGACAAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010550