BGIOSGA010880

From RiceWiki
Revision as of 09:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010880| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010880, complete gene.| tag = OsI_112...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010880

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010880, complete gene.

LocusTag

OsI_11253

Ensembl Transcript ID

BGIOSGA010880-TA

Ensembl Protein ID

BGIOSGA010880-PA

Length

3930

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12099870..12103799

Sequence Coding Region

12103779..12103799,12103168..12103557,12102807..12102956,12102611..12102686,12102407..12102531
,12101997..12102188,12101310..12101355,12101153..12101225,12100463..12100497
,12100283..12100371,12099870..12100067

Genome Context

<gbrowseImage1> name=IndicaChromosome03:12099870..12103799 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:12099870..12103799 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTTCAAACGCTCCTATGCTGTTTCCAGAAGCACTCCTCCAGCAGATACTGAAGTCCATGGTACATCCAGATGTTGACACTCGTGTGGGGGCACACCACATGTTTTCTGCTGTTATTGTTCGAGGACCAAGCCGTCAGAGGAGTGAATCAGACTTTCTATATGAAACAAAAAAATGGCAGTCTCGGACTACATCAGTATTTGCTTCAGCTACTGCTCTACTTGAGAAGTTAAGGAGAGAAAAAGAAAGTTTAGGTTCTGATAAGACAGGAAACATGGATGATGAGAAGGAAAAAAGCATAAGTGAAGAGGAAAATAAACATGTTTGGGCACGTAAAAACTCGGCTTATTTTTCAAAGCTGGTTTTCTCTTTCACTGATCGATATGCAGCACTAACTAGTTCTGCAGAGGAGGCTAATATTGTCATGCTAACTGAAGATCAAAAAAATCAATTGCTCTCCGCGTTTTGGGTACAGGCAAATCAGACAGATAACACTCCTTTTAATTATGAGGCGATTGGTCACTCGTACAGCCTCACGGTTATTTCTTCTCGCCTTAAGGATTCAAGGAACAGTAATAACATTCAGTTTTTTCAGTTGCCGCTGTCCCTTCGTAGTGTTTCCTTAACCTCAAATGGAGTCCTTTCCCCTTCTTGCCAGCGGTCTATTTTTACCTTGGCAACAAGCATGCTAGCTTTTGCTGGGAAAGTCTGTCACATTACTGAATTGGTTGATGTGCTGAGGTGCTTTACATCTTGCAATATGGATCCTTATCTAAGAATTGGTGAAGACTTGCAACTCTATGTAAGGTTGCAATCTGATCTAGGTAACTATGGTTCTGATAGCGATCAAGAAATCGCTAGATCTGTACTTTCTGACTGCAGGACAAAAGTGGGGATTAATGATCAGCGAGTACTTGATGTAGTTGCTTGTGCACTGTGTAATTTAACTGAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAGCTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTGATTGATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MSSNAPMLFPEALLQQILKSMVHPDVDTRVGAHHMFSAVIVRGPSRQRSESDFLYETKKWQSRTTSVFASATALLEKLRREKESLGSDKTGNMDDEKEKSISEEENKHVWARKNSAYFSKLVFSFTDRYAALTSSAEEANIVMLTEDQKNQLLSAFWVQANQTDNTPFNYEAIGHSYSLTVISSRLKDSRNSNNIQFFQLPLSLRSVSLTSNGVLSPSCQRSIFTLATSMLAFAGKVCHITELVDVLRCFTSCNMDPYLRIGEDLQLYVRLQSDLGNYGSDSDQEIARSVLSDCRTKVGINDQRVLDVVACALCNLTEDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYGLIDGVIMNPLKALQPLPASS</aaseq>

Gene Sequence

<dnaseqindica>1..21#243..632#844..993#1114..1189#1269..1393#1612..1803#2445..2490#2575..2647#3303..3337#3429..3517#3733..3930#ATGTCTTCAAACGCTCCTATGGTTAGTCTGAATCTATACTATCTACTCACTATTTGAGTTAAGTATCAAAATAAAAAGGATTGCAATCAAGTTCAGGAACTGTGTAGCTCATATACGGATAAAATAGTTAACTTTTGTGGTTGATATTCTTCTCTATATTTACAAAATACTATTCTCTGACCAATGCTATGTGGATCACTTCTGCCATTCTTTACTAATTCTTTAATAACTCTTCTTAGCAGCTGTTTCCAGAAGCACTCCTCCAGCAGATACTGAAGTCCATGGTACATCCAGATGTTGACACTCGTGTGGGGGCACACCACATGTTTTCTGCTGTTATTGTTCGAGGACCAAGCCGTCAGAGGAGTGAATCAGACTTTCTATATGAAACAAAAAAATGGCAGTCTCGGACTACATCAGTATTTGCTTCAGCTACTGCTCTACTTGAGAAGTTAAGGAGAGAAAAAGAAAGTTTAGGTTCTGATAAGACAGGAAACATGGATGATGAGAAGGAAAAAAGCATAAGTGAAGAGGAAAATAAACATGTTTGGGCACGTAAAAACTCGGCTTATTTTTCAAAGCTGGTTTTCTCTTTCACTGATCGATATGCAGCACTAACTAGTTCTGCAGAGGTATTTTTTCTTTCAGTGAGTTTGATTGTTTGTCCTGCTTGCAGTGACATGGCACTTCTACTAGTAATTGAAGCACACATCCTTTGTTCATTTCTTGCTCTAGTGTCATTGTCTCCGATGTTTTTTTTTGTGTCGGATGGGGCATGCATGTATATAATCCTAGAGTATGGTAATCGTGATATTTGAATAATCCGCTCTATGTATTTCCCAGGAGGCTAATATTGTCATGCTAACTGAAGATCAAAAAAATCAATTGCTCTCCGCGTTTTGGGTACAGGCAAATCAGACAGATAACACTCCTTTTAATTATGAGGCGATTGGTCACTCGTACAGCCTCACGGTTATTTCTTCTCGCCTTAAGGTACAGGTTGATTTGAAAATATATAACTATTACTGTTATTCCTGCATGCAGTGGAAGTTCACATGGTTTGTCTAAGCTATATTTTTTTTTGCCATGGAAATATTTTTTTTGGTGCTGCAGGATTCAAGGAACAGTAATAACATTCAGTTTTTTCAGTTGCCGCTGTCCCTTCGTAGTGTTTCCTTAACCTCAAATGGTAGGACCCACACAGTGAAATTTGTGATTGATCTCTTCTGAACCACAAAAGTCACTTGCCTTTATGTATGTTTTTCCAGGAGTCCTTTCCCCTTCTTGCCAGCGGTCTATTTTTACCTTGGCAACAAGCATGCTAGCTTTTGCTGGGAAAGTCTGTCACATTACTGAATTGGTTGATGTGCTGAGGTGCTTTACATCTTGCAATGTAAGTACCTAATTCTAACGCAGATGCTATCTTTTCACGGAATCATGCATATGCATGAAAGTGCTTCATTTTGGCAATAGTTTTTATTTGCTGTCTAGTTTTTTGCTCATTGCCCAATTATTTGTGTACCAATTTTTGCTTACTTTTACTATTTGACAAATAAAAATAGTTTATGTCCATGACTGTTTAGTGAAAATAACTCATGAAATATTTCGCAGATGGATCCTTATCTAAGAATTGGTGAAGACTTGCAACTCTATGTAAGGTTGCAATCTGATCTAGGTAACTATGGTTCTGATAGCGATCAAGAAATCGCTAGATCTGTACTTTCTGACTGCAGGACAAAAGTGGGGATTAATGATCAGCGAGTACTTGATGTAGTTGCTTGTGCACTGTGTAATTTAACTGAGGTAAAGGTTGATTTTGCCTTCTATTTGCTGTTGACACTGCACGTTGTGTTCTTATTGAGGTCACATGCTGTTGACAGCAATGGTTGAGTGCAGTTATCTAATATTCTTGGAATGCTATTGCCAGATGGACAAGGATGTACTGGTGAAGGAGCTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGACGCTATCCGACATCCGATTCCTATTTCCTATACCAATAGCTGCCAAAGCTTTGTTACGAACTGCTTACTCTAAAAATACTGAGGCGATGAAGGGAGTGGTGCTCACTGTATTTACAATTTTACATGAACTATATGGTGTCTCGTCTTAATGGATGATTGTTGTTAATCCCCAGATAAAATGGTCCTTTTATCTGTCAATACTCAATACCAGACACTAAAGTACCATTGCTACTCACTTTGGGTTATATATGAGTCCTTGTTAGTCCTAGCTTAGGCTGTGATTCAGTTATGTAGTTGTGACCTCAAACCTTATGGTGAGGCTTGTATTGCGATTTCATCTACCAGGACCTGGATTGCCATGGCACCATATATTCATGATTTCGTACTTACATTCAGTACTCGATTCTTGACTTCCTCTCAACATTCCTGTAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAGCTGGTAATAACTCATCCATTTTTTTTTGCATAGCTCCATCTCACTCTTGGAACATTTGTTTCACACCAAACTGCATTTTGTGTTTAGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGGTATTTAGTACTGAAAAACTGATATCCTTAATTGGCAATTGATTTGGATTTGTGACGCTCTGCAATTTATGCATCTTATAATGTTTAATTCTTTAGCATTCTGTTCAATTATTCAAGTAAGGGTTTCAGTTGCTATATTCTGGTCAACATGTAAACATGCACCTGTTTCCAGTTGTATATCCCGCCTAATTCCTTCTCCTTTCATAATGTGGGAAGCACACCAAATCATTGATTGTATCAGGCATGTTCTATTCAGTATAATCAGCCTCAATCTAGGATTTTGGGTTGACTGAGATCAAATTTTGTGCTGCGCATGTTAGCAAAGAAGCTTTGTACCCTCATACCTCCTTAATCAAAATATAATTTTTCAAACTTTATGTTTGTGAGAATCCATATGGATGTTGATAACAGGAGAGTTTCTTCATTTCATGTACTTTATCAATGTTTAGCCAACAATGCAAATTCAGGAGTGCTTATCAGTATTCCAGGCACACAGTTTATTAGTAAAACATGATAACTGTTCAGCTGCAAATCTGTAACCATTTCTTTCTCATTGTACTTTTGGAATGCTCTCTTTTAGCTATCCATCTTGCCTTAAGTTGCGTTGATTTCGGTTATGCACTCATTTTCACTGTTTTGTTTCCCTTTTCGGCAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGTAATTGAGTGATTGTTAATGCAGTACTACATTTATTCTACAACTAGACTGATCTGAATCCTTGAATACTGTACTTGTGAATGTAACACAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGTAAATCCACAAAGTTAAATTGTGTTTTTATCAAGATCAGGACATCTCAATAGCAAATAATTAACCATATCATTGTTTCTCTCTTGCCGGTATATGGTTCGATCTACATGAAATACATTTATTTCCACAAGCGAATAGCAACTCCGCTGGCTTTCTATTGTTACTTGTATCACCAGAAGATTTTTCTGTCACTGATTTTCCATTATTTCTTTTAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTGATTGATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010880

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA010880&oldid=55703"