BGIOSGA010958

From RiceWiki
Revision as of 09:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010958| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010958, complete gene.| tag = OsI_110...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010958

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010958, complete gene.

LocusTag

OsI_11073

Ensembl Transcript ID

BGIOSGA010958-TA

Ensembl Protein ID

BGIOSGA010958-PA

Length

2121

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10746860..10748980

Sequence Coding Region

10748874..10748980,10748122..10748161,10747908..10748003,10747571..10747770,10747374..10747469
,10746860..10747205

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10746860..10748980 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10746860..10748980 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCGCTATGATGATCATTATGGAAGCACACGCTTGTATGTTGGTAGACTGTCTTCGCGCACTCGTTCTCGTGACCTAGAATATCTTTTCGGCAGATATGGAAGAATACGTGAAGTGGAGTTGAAGCGCGACTACGCGTTTATTGAATTCAGTGATACCCGTGATGCTGATGAAGCGCGGTATAACCTAGATGGCAGGGATGTTGATGGAAGCCGCATTCTTGTTGAGTTTGCTAAAGGAGTTCCACGTGGTGCTGCTGGTGGTTCACGTGAATATATGGGGAGAGGACCTCCTCCAGGAACAGGTCGCTGTTTTAACTGTGGGATTGATGGTCACTGGGCAAGAGACTGCAAGGCTGGTGACTGGAAGAACAAATGTTACCGTTGTGGAGAAAGAGGTCACATAGAAAGAAACTGCCAAAACAGTCCAAGAAATCTCAGGCGAGAGAGAAGTTATTCGCGCTCCCCATCGCCACGCCGTGGACGTGGTCATGGTCGTAGTCGTAGCTATAGCCGGAGCCGGAGCAGGAGTTACAGGGGACGCAGAGATCGTGATGATAGGAGATCAAGGAGTCTTAGCTACAGCAGAAGTCCCAGGCGATCCATCTCCCCAGCAGCAAATGGAAAGGAGCGCAGCCCCAGCCCGAATGGTAGGCGGAGTCCAAGGAGTCCACAGGATCGGGTAAGCCCACCACCCAAGGATAATGATGAGCACAATGGTGACAGCCCCCGGGGCAGGGAGAACAGCAGGAGCCCATCTGACGGCTACCGTAGCCCTGTGGCTGCCAATGGGCGCAGCCCAAGCCCAAAGAACAATGGAAGCCCTAGTCCAATGGACAACAATAGCCGAAGCCCAAGGGGACAACGGCAGCCCGAGCCCTAG</cdnaseq>

Protein Sequence

<aaseq>MPRYDDHYGSTRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKRDYAFIEFSDTRDADEARYNLDGRDVDGSRILVEFAKGVPRGAAGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRGRGHGRSRSYSRSRSRSYRGRRDRDDRRSRSLSYSRSPRRSISPAANGKERSPSPNGRRSPRSPQDRVSPPPKDNDEHNGDSPRGRENSRSPSDGYRSPVAANGRSPSPKNNGSPSPMDNNSRSPRGQRQPEP</aaseq>

Gene Sequence

<dnaseqindica>1..107#820..859#978..1073#1211..1410#1512..1607#1776..2121#ATGCCTCGCTATGATGATCATTATGGAAGCACACGCTTGTATGTTGGTAGACTGTCTTCGCGCACTCGTTCTCGTGACCTAGAATATCTTTTCGGCAGATATGGAAGGTAAGAACAGAACAATGGGCATTAAGAGAGCTTATTTCTCTGAAGTATAATGGATTTTTCTGGTAAAATTATGATAAGTCACTTTCATTTGGTGTAAGTGTAAAACACTAGTGCTGCGCTAACGCTTGCTTAACAGTTGACATTACAACTTGTTGGTACATTCAAATTTCACCAAACAAATCAAGCTGTTTCCTATTAAAATTGTGACCTTTCCAAAATGTGGGTGCAAATCTTCGGTTGTGCTCAGCATAGGCCAGTAAAGCACCATATCCTTCCTACCCTTTCCCATTGGCCAGCTCATGGCAGGTCTTGGGTTCAGTGGTACCATACCGTCTCTTTTCAGCTACTTTGTGGACAGAGTTCCTTCAAGCCATTCAGTGTGACATTTTCTGTTATTTCTTTAAGTATGCTGTAGAAGTTTGACCCCCCAGGTCTTGTGTGTTTGACTTGAATGATCTTGTTGAAGGTTTTTCGGTTTTTTACACAACCCGGGAGGTCTGTGGTGGTCTGGTGGAAGGGGTGCCCTTGGTGGAATTGGTGGCCATTCTTTTTTCTCCGGAATTGGTGACCATTCTTCCAAAGTTTGTCGAGGACTTTGGTGAAGGGTGCCCTTGGTGTAATGTTATTGACTGTTTTAGTGGAAGTTGCAAGTCGGTGATGCATTTGAGTACTTGAGTCATGATGGCTTACTGTTTGGCAACCATTGGTGCAGAATACGTGAAGTGGAGTTGAAGCGCGACTACGCGTTTATTGTATGTGAATACTTCCCTCATTTTTTTATTGCGTAACTTCTCTCTTTTTAAGTTCTTATGAGGTGTATTTTGTTCACATATGAGTCCTATATTTTGCGACATCTATTTTACCAAACAGGAATTCAGTGATACCCGTGATGCTGATGAAGCGCGGTATAACCTAGATGGCAGGGATGTTGATGGAAGCCGCATTCTTGTTGAGTTTGCTAAAGGAGTAAGCAGTTCTTTGGTTGCATTCCTAAGCACATCCTGATACTAATTTATTTTCTTCCTTCATGTCATGCTGCTGCTGAATTGATTATCTGTACTTTTGTTGGCTCTGATGTTCTTTTCAAAAAATTGTGCATGCAGGTTCCACGTGGTGCTGCTGGTGGTTCACGTGAATATATGGGGAGAGGACCTCCTCCAGGAACAGGTCGCTGTTTTAACTGTGGGATTGATGGTCACTGGGCAAGAGACTGCAAGGCTGGTGACTGGAAGAACAAATGTTACCGTTGTGGAGAAAGAGGTCACATAGAAAGAAACTGCCAAAACAGTCCAAGAAATCTCAGGTATTGATTGATACCGTTGGTCAGATACACTGTAGCACTCTGTTCTAAGGTACTATGTTTGAATTACTCAAGACTTCTCCAATACGTACTTGGTTTTCCAGGCGAGAGAGAAGTTATTCGCGCTCCCCATCGCCACGCCGTGGACGTGGTCATGGTCGTAGTCGTAGCTATAGCCGGAGCCGGAGCAGGAGTTACAGGTATGCTTCAAAAGCCACCTGCTCAAATTATTACTCTCCATGCTGTCTGTTCAAATCGCAGATATGCTATTGTTGACCTGGTACTTGTTTTCCCTTGGCCTGATTGTTTTACAATCTTTTTGTTACTATCAGCCGATCTAGATCCAGATCCCTATCTGGATCTCCCAGGGGACGCAGAGATCGTGATGATAGGAGATCAAGGAGTCTTAGCTACAGCAGAAGTCCCAGGCGATCCATCTCCCCAGCAGCAAATGGAAAGGAGCGCAGCCCCAGCCCGAATGGTAGGCGGAGTCCAAGGAGTCCACAGGATCGGGTAAGCCCACCACCCAAGGATAATGATGAGCACAATGGTGACAGCCCCCGGGGCAGGGAGAACAGCAGGAGCCCATCTGACGGCTACCGTAGCCCTGTGGCTGCCAATGGGCGCAGCCCAAGCCCAAAGAACAATGGAAGCCCTAGTCCAATGGACAACAATAGCCGAAGCCCAAGGGGACAACGGCAGCCCGAGCCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010958