BGIOSGA010971

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Revision as of 09:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010971| Description = BGIOSGA010971| Definition = Oryza sativa Indica Group BGIOSGA010971, complete gene.| tag = | tid = BGIOSGA010971-TA|...")
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Gene Name

BGIOSGA010971

Description

BGIOSGA010971

Definition

Oryza sativa Indica Group BGIOSGA010971, complete gene.

LocusTag

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Ensembl Transcript ID

BGIOSGA010971-TA

Ensembl Protein ID

BGIOSGA010971-PA

Length

1743

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10575352..10577094

Sequence Coding Region

10576874..10577094,10576120..10576194,10575913..10575985,10575726..10575809,10575551..10575649
,10575352..10575471

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10575352..10577094 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10575352..10577094 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACCAGCCATCACCGCTCGCTCCTCTTTTGCTTCGGCCGTCACCGCTGACGCCTCAAGTTTTCTTCTCGTTTTACCTTTCAACGCCCGTCTTACTCCTGTACTCTCGTTTACCAGAGCACGGTGTGACAGATGCAGCGGTTTCACCTACAAAAAGTGCTCATTTTTGCAAGTTGTGTACGGCAATCGCAATGGCAATGGCAGCAGCAGTAGCAGCAAGCTTGCAATGGAAGTTCTCCCGCCTACTATGCCATCTGCTTCTAAGCAGCCACCTCTCTACGATGGCGAAACCAGTTGCANTGGCAGATTGTACATGTCATACATTTGCCCATATGCGCAACGGGCATGGATCGCAAGGAACTACAAGGGTTTGCAGGAGAAGATCAAATTAGTCCCCATGGACACGAATGATAGGCCAGCATGGTACAAGGAGGTGTACCCCAAGAATACGCTGCCATCCCTGGAGCACAACAACAAAATCATTGGAGAGAGTTTGGATTTGATCAAGTACATAGACATCAACTTTGCAGGCCCCAGATTGACTCCTGATGATTCTGAAAAGCAAAGGCTTGCAGAAGAACTCCTGGCTTATTCAGATATCTTCAATCAGGCTGTGCGTTCCGCTCTGATCTCCAAGGATGCTATGACAGCAGAAGCTGGCAAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAPAITARSSFASAVTADASSFLLVLPFNARLTPVLSFTRARCDRCSGFTYKKCSFLQVVYGNRNGNGSSSSSKLAMEVLPPTMPSASKQPPLYDGETSCXGRLYMSYICPYAQRAWIARNYKGLQEKIKLVPMDTNDRPAWYKEVYPKNTLPSLEHNNKIIGESLDLIKYIDINFAGPRLTPDDSEKQRLAEELLAYSDIFNQAVRSALISKDAMTAEAGKN</aaseq>

Gene Sequence

<dnaseqindica>1..221#901..975#1110..1182#1286..1369#1446..1544#1624..1743#ATGGCACCAGCCATCACCGCTCGCTCCTCTTTTGCTTCGGCCGTCACCGCTGACGCCTCAAGTTTTCTTCTCGTTTTACCTTTCAACGCCCGTCTTACTCCTGTACTCTCGTTTACCAGAGCACGGTGTGACAGATGCAGCGGTTTCACCTACAAAAAGTGCTCATTTTTGCAAGTTGTGTACGGCAATCGCAATGGCAATGGCAGCAGCAGTAGCAGCAAGTAGGTGCGATGCAGTTTCTACTCTCTCTTTTTTTTTTCAAAGAAAAGTTTCTTAGAGCAAATTTTATAAAAGAGGTGGATGTTGCATCTAATGTTGACCACATCATCAACTAATAAATGTAGAGATAACATGTACAATATATCACATCTATACTAATTCTAATACACTAGCCCCAACGTTTGTTTGCCCAATCTACTCTTCCCCTCTCTCCTTTTGTCTTGAATTTTGTGTAGTGGTTGCCTCTTGCATGAGAGGTGGCTGCTTATCTCTCTCATCTCTTCTCTCCTCCACCTCACTATTTTAGCTTATGTGGCATCTAGGAGATTGTGCTTGTATGCCCATAGTACTTGCCCTAAGGCAGCGTTCGAGAGGGTGAGAGAGTGAGTTTGTTTGTTTCGTTTTCCGCACGCACGTTTCCCAAACTACTAAACGGTGCGTTTTTTGTAAAAAATTTCTATAGGGTTGCTTTAAAAAAATCATATTAATCCATTTTTGAAATTTAAAATAGTTAATACTCAATTAATCATGAGCTAATAGCTCACCTCGTTTTGCATATCTTCCCAATCTCCTCAATCCCCTTCTTCTCAAACACACCCTTACTCTATTGCAACGAATAATACGTACTATATCTGAATCACATAATTGCACTGTATGATTTATCGTCTCTGTTGGATTTAGGCTTGCAATGGAAGTTCTCCCGCCTACTATGCCATCTGCTTCTAAGCAGCCACCTCTCTACGATGGCGAAACCAGGTTGATCAATCATTACTGTTTATCTGAAATTACCTTCTCCCTTTCAAATCTTTCAGAAAATATGCTATCTGTAACGTCCACATCACCTTGATCTGCATTTGTCAATCATCTCGACCTTGCTAATGTATAAAAAGTTGCANTGGCAGATTGTACATGTCATACATTTGCCCATATGCGCAACGGGCATGGATCGCAAGGAACTACAAGGTACTACTAAACCAAGCTGGTCTTCTGAACAAGCTTGATTCACTTGTCTTCTTTAGCAAATTGTACGTCGGTGGTTTTGAATTTTGATTGTTTTGGGCATCAGGGTTTGCAGGAGAAGATCAAATTAGTCCCCATGGACACGAATGATAGGCCAGCATGGTACAAGGAGGTGTACCCCAAGAATACGGTGTGGCTAGTCTTAAATATTATATGAAAATGTAGATAATACTTGTTTTCTTAATGCTTGATACTTGTCATGACAGCTGCCATCCCTGGAGCACAACAACAAAATCATTGGAGAGAGTTTGGATTTGATCAAGTACATAGACATCAACTTTGCAGGCCCCAGATTGACTCCTGATGTAAGCCTATCAAACTGCTTAACTCCAAATCTGTAATAACAAGCCCTGACAGGATTGATACCTCTACTGGTGACATTAGGATTCTGAAAAGCAAAGGCTTGCAGAAGAACTCCTGGCTTATTCAGATATCTTCAATCAGGCTGTGCGTTCCGCTCTGATCTCCAAGGATGCTATGACAGCAGAAGCTGGCAAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010971