BGIOSGA011029

From RiceWiki
Revision as of 09:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011029| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011029, complete gene.| tag = OJA1364...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011029

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011029, complete gene.

LocusTag

OJA1364E02.18

Ensembl Transcript ID

BGIOSGA011029-TA

Ensembl Protein ID

BGIOSGA011029-PA

Length

1702

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9569298..9570999

Sequence Coding Region

9570586..9570999,9569978..9570194),complement(9569758..9569864,9569298..9569486

Genome Context

<gbrowseImage1> name=IndicaChromosome03:9569298..9570999 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:9569298..9570999 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGAGGCGGTCGCAAGCGGCGCAGCGGGGAGATGGACCCTCCGCGGCAAGACGGCCCTCGTCACCGGCGGCACCCGCGGCATCGGGTACTCACCCCAACACCCTTCTCTGGTTCTCCCCTCTCGCTACCCAGTGAGGAGTGAGACCTCCACCGCAGAGCCTTTGCTGCTCTTCCACGATCAACGCGGGGAATTCATGCGCAGGCATGCGGTGGTGGACGAGCTGGCGGCGCTGGGGGCGGCCGTGCACACCTGCTCCAGGAAGGAGGCCGAGCTGGGCGAGCGCCTCAGGGAGTGGGAGGGCAAGGGCTTCCGCGTCACCGGCTCAGTCTGCGATGTCTCCGTGCGGGAGCAGCGGGAACGCATGCTCCGCGAGGTCGCCGGCCTCTACGGTGGCAAGCTCGACATCCTCGTGAACAACGTGGGAACAAACTTTTCAAAACAAACCACTGAATACTCTGCAGATGATTACTCGTTCATAATGGCCACCAATCTTGAATCTGCGTATCATCTGTGCCAACTTGCTCATCCTCTTCTCAAATCATCTGGGTCAGGAAGCGTTGTCTTCATATCGTCAGTCTCTGGAGTGGTGGCTGTAAGTTCTGGCTCTGTCTATGCGATGACAAAAGGTGCCATGAACCAGCTGGCCAAGAACCTGGCATGTGAGTGGGCGAAAGACAATATAAGAACCAATTCTGTTGCACCATGGTACATGAAGACTTCACTTGTGGAAGATGAATTGGCAAGGAAGGACTTCGCTGACAGCGTCGTGCGTCGAACAGCGCTGAAGCGCGTGGGAGAACCAGAAGAGGTGTCATCGCTGGTCGCGTTCCTGTGCATGCCCGGCGCTTCCTACATCACCGGCCAGACGATCTCGGTCGACGGCGGCATGACCATAAACGGACTGTATCCAACTCAGGACTAG</cdnaseq>

Protein Sequence

<aaseq>MAEAVASGAAGRWTLRGKTALVTGGTRGIGYSPQHPSLVLPSRYPVRSETSTAEPLLLFHDQRGEFMRRHAVVDELAALGAAVHTCSRKEAELGERLREWEGKGFRVTGSVCDVSVREQRERMLREVAGLYGGKLDILVNNVGTNFSKQTTEYSADDYSFIMATNLESAYHLCQLAHPLLKSSGSGSVVFISSVSGVVAVSSGSVYAMTKGAMNQLAKNLACEWAKDNIRTNSVAPWYMKTSLVEDELARKDFADSVVRRTALKRVGEPEEVSSLVAFLCMPGASYITGQTISVDGGMTINGLYPTQD</aaseq>

Gene Sequence

<dnaseqindica>1..414#806..1022#1136..1242#1514..1702#ATGGCCGAGGCGGTCGCAAGCGGCGCAGCGGGGAGATGGACCCTCCGCGGCAAGACGGCCCTCGTCACCGGCGGCACCCGCGGCATCGGGTACTCACCCCAACACCCTTCTCTGGTTCTCCCCTCTCGCTACCCAGTGAGGAGTGAGACCTCCACCGCAGAGCCTTTGCTGCTCTTCCACGATCAACGCGGGGAATTCATGCGCAGGCATGCGGTGGTGGACGAGCTGGCGGCGCTGGGGGCGGCCGTGCACACCTGCTCCAGGAAGGAGGCCGAGCTGGGCGAGCGCCTCAGGGAGTGGGAGGGCAAGGGCTTCCGCGTCACCGGCTCAGTCTGCGATGTCTCCGTGCGGGAGCAGCGGGAACGCATGCTCCGCGAGGTCGCCGGCCTCTACGGTGGCAAGCTCGACATCCTCGTAAAGCACTTCGCTTAGTTTCTCTTTATCTCTCCTCAATTTAACTCCTTGCTTCCCCATCTAGGTCCCAGCCTTTCTCGTCACTGAACCTAATTTCGATCAAGCATGACTCTCTCGATTTTCATCTACATGGTTAGTAATGCATAAATCATAGATGTGACCATGGCTGAACCACTTTGCTGCCTGCTAGTCATGATGCTTAGTTGGTAAGTCAGAGTTCATGTTTAGCGGAGAGTTTGCATATATAACATCAAGGCTAGGTGCCACTTTAGCACTGAAATTCATCGAACATTTGAGTTACTTTGAGAAATGTGTTACTTTGACAACCCTCAGCTCTACTGTTGTAGACCTGCAGTTGATTTCTTTCATGTTTTCGCATTTTGGTATGCAGGTGAACAACGTGGGAACAAACTTTTCAAAACAAACCACTGAATACTCTGCAGATGATTACTCGTTCATAATGGCCACCAATCTTGAATCTGCGTATCATCTGTGCCAACTTGCTCATCCTCTTCTCAAATCATCTGGGTCAGGAAGCGTTGTCTTCATATCGTCAGTCTCTGGAGTGGTGGCTGTAAGTTCTGGCTCTGTCTATGCGATGACAAAAGGTACAATATATATTACCGCAGTACATGCATTTTTTTTTTCATGGATGGCATAGGTGAAAAAGCCGATATGCATCGTTGATGATTCTTGCGAGATATCTTCGGGTGTTGTTTAGGTGCCATGAACCAGCTGGCCAAGAACCTGGCATGTGAGTGGGCGAAAGACAATATAAGAACCAATTCTGTTGCACCATGGTACATGAAGACTTCACTTGTGGAAGATGTAAGGCACTGCCTCTTTTGCTTTGATCAGTCATAGCTTCATAGGTAGCATTTGCTTCCGTTGCTCATCTGAATTTACTGTAAGGTAGATATTTGGTTGCACCGTTAATGCATCAAAATTGACTTCTGGATCCAGTGTTATCATTCGGTATAGAGATTCATGCATTCTTGTCTGCTCTCCTTAATTTGTACTTCTACATCAAAACCATAGTCGAAAACTATGTGGCCAGCTTGTTCTGAATAGTTTTGTTTCGCTTGTTTTGGCTCTGCAGGAATTGGCAAGGAAGGACTTCGCTGACAGCGTCGTGCGTCGAACAGCGCTGAAGCGCGTGGGAGAACCAGAAGAGGTGTCATCGCTGGTCGCGTTCCTGTGCATGCCCGGCGCTTCCTACATCACCGGCCAGACGATCTCGGTCGACGGCGGCATGACCATAAACGGACTGTATCCAACTCAGGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011029