BGIOSGA011038

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Revision as of 09:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011038| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011038, complete gene.| tag = OJA1364...")
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Gene Name

BGIOSGA011038

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011038, complete gene.

LocusTag

OJA1364E02.5

Ensembl Transcript ID

BGIOSGA011038-TA

Ensembl Protein ID

BGIOSGA011038-PA

Length

2846

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9483363..9486208

Sequence Coding Region

9486092..9486208,9485841..9485925),complement(9485617..9485749,9485416..9485536),complement(9485240..9485365
,9484997..9485116),complement(9484612..9484824,9484364..9484426),complement(9483954..9484069
,9483795..9483853),complement(9483363..9483700

Genome Context

<gbrowseImage1> name=IndicaChromosome03:9483363..9486208 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:9483363..9486208 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGTGGCTCTGCGCTTTCCTGAAGGGGACGAAGGACGGCGAGGCCAACCGACGGCGCCCTCGGGTGACGGCAGGAGAAGAGACCACGCTCTGGGAAGAACCAGTTAGACCAAAGAAGGAAGAACCACCTAGACATAACAATGAAGAAATGGACCATGCACTTGCCCTTGCTCTTGCAGACGACGCCAAAAATACAAAAGAGAGAAACCATGACAAGGGAGAAAACGATGAAGAACTCGCTAGAGCAATACAGGACAGTCTGAACATGAATCCTTACCAGCCTTACAATCCTTGTGCACCCTCTCAGACCCAGGCCAGGTCGAGAGGATACAGGGTCTGTGGGGGTTGCAAGCATGAGATAGGGCATGGCCATTACTTGAGCTGCATGGGAATGTACTGGCACCCTCAGTGCTTCCGCTGTTCTTCCTGTCGCCACCCTATCCGTGAGACGGAGGTGTTCTCAGGAAGTGACAGTTTACTTTATTCTGTTTCCCAGTTCACCTTGCTAGGTACAGATCCATACCACAAGCTGTGCTACAAGGAGCTTCATCACCCAAAGTGTGACGTCTGCCTTCAATTTATCCCAACGAACAGGACTGGTTTGATAGAGTACAGAGCCCATCCATTCTGGGGACAGAAGTATTGTCCTTTGCATGAGCATGATAGAACACCTCGTTGCTGTAGCTGTGAGAAAATGGAGCCAAGGAACACAAAGTATATGTCATTAGGGGATGGACGCAGCTTGTGCATGGAATGCCTGGATTCTGCAATCATGGACACCGGTGAATGTCAACCGCTATACCATTCCATCAGAGACTACTACGAAGGGATGAACATGAAACTAGACCAGCAGATACCCATGCTCTTGGTTGAACGTCAAGCCCTTAATGAAGCTATGGAAGGAGAAAGCAAAGGACCGCATCATATGCCTGAAACACGAGGCCTTTGTCTGTCAGAGGAGCAGACTGTGACCAGTATACTTAGGAGGCCCAGAATTGGTGCAAATCGGTTACTAGATATGAAAACCCAACCGCAAAAGCTAACTAGGAGATGCGAAGTCACTGCAATTCTTGTATTGTTTGGCCTCCCCAGGCTGCTAACGGGCTCCATTCTTGCCCATGAATTGATGCATGGGTGGTTGCGCCTCAAAGGTTACCGGAACCTAAAGGCGGAGATTGAGGAAGGTATATGCCAGGTCATGTCTTACCTGTGGCTGGAGTCAGAGATCCTTCCATCCACTTCAAGATATGGACAGGCTTCAACATCTTACGCTTCATCTTCGTCGTCCTCCTATCGACCACCACCGTCCAAGAAGGGTGGGATCTCTCACACCGAGAAGAAGCTTGGAGAATTCTTCCTGCATCAGATCGCCAATGACACATCATCAGCATACGGCGATGGTTTCAGAGCTGCCTATGCAGCTGTCAACAAGTATGGCCTTCGCCAATCACTGAACCATATACGGCTAACCGGAGGCTTTCCTGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MKWLCAFLKGTKDGEANRRRPRVTAGEETTLWEEPVRPKKEEPPRHNNEEMDHALALALADDAKNTKERNHDKGENDEELARAIQDSLNMNPYQPYNPCAPSQTQARSRGYRVCGGCKHEIGHGHYLSCMGMYWHPQCFRCSSCRHPIRETEVFSGSDSLLYSVSQFTLLGTDPYHKLCYKELHHPKCDVCLQFIPTNRTGLIEYRAHPFWGQKYCPLHEHDRTPRCCSCEKMEPRNTKYMSLGDGRSLCMECLDSAIMDTGECQPLYHSIRDYYEGMNMKLDQQIPMLLVERQALNEAMEGESKGPHHMPETRGLCLSEEQTVTSILRRPRIGANRLLDMKTQPQKLTRRCEVTAILVLFGLPRLLTGSILAHELMHGWLRLKGYRNLKAEIEEGICQVMSYLWLESEILPSTSRYGQASTSYASSSSSSYRPPPSKKGGISHTEKKLGEFFLHQIANDTSSAYGDGFRAAYAAVNKYGLRQSLNHIRLTGGFPV</aaseq>

Gene Sequence

<dnaseqindica>1..117#284..368#460..592#673..793#844..969#1093..1212#1385..1597#1783..1845#2140..2255#2356..2414#2509..2846#ATGAAGTGGCTCTGCGCTTTCCTGAAGGGGACGAAGGACGGCGAGGCCAACCGACGGCGCCCTCGGGTGACGGCAGGAGAAGAGACCACGCTCTGGGAAGAACCAGTTAGACCAAAGGTAATGTTTCTCAATTCCTCCGCAACCTGACATTTTTCTGTTCTTTTCTTTGGTTCATGGAGTGCCACTATCCAAATTCCCCTTCCTTTATCAGTTAGATTATGGTAATGATGTAGCACTATCATGGGGAAAAGAGTTTCTGAACCTTTCTTTGTTATGTTTCTAGAAGGAAGAACCACCTAGACATAACAATGAAGAAATGGACCATGCACTTGCCCTTGCTCTTGCAGACGACGCCAAAAATACAAAAGGTGCCATATTTGTGAATTCTGTGATATTATGATCATATATTTTTAACCTATCTCTTCACTAAGCACCATTGATGCAACTTTTTTTGGGTAGAGAGAAACCATGACAAGGGAGAAAACGATGAAGAACTCGCTAGAGCAATACAGGACAGTCTGAACATGAATCCTTACCAGCCTTACAATCCTTGTGCACCCTCTCAGACCCAGGCCAGGTCGAGAGGATACAGGTTAGCAAATCTGCTTTCACTAACCTGTCTACAATTCACAGAAACAGCTGGTATGTAAAGAAGCAATATATATCTTTCAGGGTCTGTGGGGGTTGCAAGCATGAGATAGGGCATGGCCATTACTTGAGCTGCATGGGAATGTACTGGCACCCTCAGTGCTTCCGCTGTTCTTCCTGTCGCCACCCTATCCGTGAGACGGAGGTAACCTTTCTGCAATTCAGTTTAGAATGTCTGAAGGTGTGTGTGTTCAGGTGTTCTCAGGAAGTGACAGTTTACTTTATTCTGTTTCCCAGTTCACCTTGCTAGGTACAGATCCATACCACAAGCTGTGCTACAAGGAGCTTCATCACCCAAAGTGTGACGTCTGCCTTCAATTTGTAAGATTTTTTTTTTTTGTGGATGAACTATTTGCAGAAGTGCTAGAACTGATTTTTGGATTAGCATGCCGTTGGAACAGCATTTGCAGGAAACCCTTTTTACGTGTTTGGTTTTTATTGCAGATCCCAACGAACAGGACTGGTTTGATAGAGTACAGAGCCCATCCATTCTGGGGACAGAAGTATTGTCCTTTGCATGAGCATGATAGAACACCTCGTTGCTGTAGCTGTGAGAAAATGGAGGTTTGTACTGCCTTTCTTGCATATGATGAATGTATTTCATGCTTACAAATACACATTAAAAATATTATTAGTTTCTCTATTTTCTCGGCAAAATTTCTATAAATTGCAATTGTACTGATTTGTCAGTTTAAAATATGAGTTCGTACTTAAGACATTTTGTGAATCCCTGCAGCCAAGGAACACAAAGTATATGTCATTAGGGGATGGACGCAGCTTGTGCATGGAATGCCTGGATTCTGCAATCATGGACACCGGTGAATGTCAACCGCTATACCATTCCATCAGAGACTACTACGAAGGGATGAACATGAAACTAGACCAGCAGATACCCATGCTCTTGGTTGAACGTCAAGCCCTTAATGAAGCTATGGAAGGAGAAAGCAAAGTGGGTTCTTTACATCTGTTTGTTCTGTAATGCATAATGCATTACTCCGTCTGGTCATAAATATTTGACGTTTAGGACAAGATTTAATCAAACTTTGAAGTTTGTTCAAATCTTGTCCTAAACGTCAAATACCTATGACTGGACGGAGTATGTGTTATTGATCATTGCATCTTGTATTTCTGCAGGGACCGCATCATATGCCTGAAACACGAGGCCTTTGTCTGTCAGAGGAGCAGACTGTGACCAGTGTAAGTACAACGCATGTCAACCTAAACAGTTTTTAGGATGGTACAATTTCTCTAATGAATAACTAACAAATCAAGGAAGACCAAGTGGTAATATGAAATCAACATCGTTCTGATCAAACGATGAGATTCTCTGATAAATACTGATCATCTAATGAGATTCCCTGATCAATGATGTAGTTGCAATAAACTAGACAGAGTAGTTGCTTTCAGATCTTACATCCACAGTTCCACTGAGTAGCAGGTTGGCCAAATGAAATCATTGACTTTGTTCCTTTGTGTTCTGATTTTCTACAGATACTTAGGAGGCCCAGAATTGGTGCAAATCGGTTACTAGATATGAAAACCCAACCGCAAAAGCTAACTAGGAGATGCGAAGTCACTGCAATTCTTGTATTGTTTGGCCTCCCCAGGTCAGTGCATTCTTCACAAGTATTTCCATTTTCATGTAAATCAAATGCTACAATTCGTGTATCATTTGTGTGAAGTCATAAACATTCCATACAATTGCAGGCTGCTAACGGGCTCCATTCTTGCCCATGAATTGATGCATGGGTGGTTGCGCCTCAAAGGTAATCATCTGAACATCCATTTCTCCCATTTTCTGAAATCCTATCTGAACATTAATTAATTTCTTTGTATCCTGTCTGACAATGGCACCTACAGGTTACCGGAACCTAAAGGCGGAGATTGAGGAAGGTATATGCCAGGTCATGTCTTACCTGTGGCTGGAGTCAGAGATCCTTCCATCCACTTCAAGATATGGACAGGCTTCAACATCTTACGCTTCATCTTCGTCGTCCTCCTATCGACCACCACCGTCCAAGAAGGGTGGGATCTCTCACACCGAGAAGAAGCTTGGAGAATTCTTCCTGCATCAGATCGCCAATGACACATCATCAGCATACGGCGATGGTTTCAGAGCTGCCTATGCAGCTGTCAACAAGTATGGCCTTCGCCAATCACTGAACCATATACGGCTAACCGGAGGCTTTCCTGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011038