BGIOSGA011109

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Revision as of 09:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011109| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011109, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA011109

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011109, complete gene.

LocusTag

OS03G0248600

Ensembl Transcript ID

BGIOSGA011109-TA

Ensembl Protein ID

BGIOSGA011109-PA

Length

4315

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8400939..8405253

Sequence Coding Region

8405185..8405253,8404541..8404604),complement(8404292..8404356,8403657..8403704),complement(8403491..8403577
,8403304..8403384),complement(8403101..8403202,8402933..8403013),complement(8402781..8402855
,8402328..8402390),complement(8402147..8402224,8401873..8402067),complement(8401735..8401785
,8401563..8401651),complement(8401414..8401465,8401225..8401281),complement(8400939..8401019

Genome Context

<gbrowseImage1> name=IndicaChromosome03:8400939..8405253 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:8400939..8405253 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGACCATCCAGAGCGTGAAGGCCCGCCAGATCTTCGACAGCCGTGGCAACCCCACCGTCGAGGTTGATATTTGCTGCTCGGATGGAACATTTGCGAGGGCTGCTGTGCCTAGCGGTGCATCTACTGGTGTATATGAAGCTTTGGAATTGAGGGATGGTGGTTCTGATTACTTGGGAAAGGGTGTCCTCAAGGCTGTTGACAATGTGAACTCTATTATTGGACCAGCATTGATCGGCAAGGACCCTACAGAACAGACTGTCATTGACAACTTCATGGTTCAGCAACTGGATGGAACCAAAAACGAGTGGGGCTGGTGCAAGCAAAAGCTTGGTGCTAATGCTATCCTGGCTGTCTCACTTGCTCTATGCAAAGCCGGAGCTATTATCAAGAAAATTCCGTTGTATCAACACATTGCTAACCTTGCTGGTAACAAGCAACTTGTTTTGCCTGTGCCTGCTTTCAATGTCATCAATGGTGGATCACATGCTGGAAACAAGCTAGCTATGCAGGAGTTCATGATCCTCCCTACTGGTGCTTCATCTTTCAAGGAGGCTATGAAGATGGGTGTTGAAGTATACCATAACTTAAAGTCTGTTATCAAGAAGAAGTATGGGCAAGATGCTACTAATGTTGGTGATGAAGGTGGTTTTGCTCCAAACATTCAGGAAAACAAGGAGGGCCTTGAGCTTTTGAAGACTGCAATTGAAAAGGCTGGATACACTGGCAAGGTTGTCATTGGGATGGATGTTGCTGCTTCAGAGTTCTACACTGAGGAGCAAACCTATGATCTTAACTTCAAGGAAGAGAACAATGACGGTTCCCAGAAGATATCTGGAGATAGCCTGAAGAATGTGTACAAGTCATTTGTTAGTGAATACCCAATTGTCTCGATCGAAGACCCATTTGATCAGGATGACTGGGTTCACTATGCCAAGATGACCGAAGAAATTGGAGATCAAGTGCAGATTGTTGGAGATGATCTCCTTGTCACCAACCCAACTAGGGTAGCCAAGGCAATTAAGGACAAGGCCTGCAATGCTCTTCTCCTTAAGGTTAACCAAATTGGATCTGTTACTGAGAGCATTGAGGCTGTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCACGGGCCAGATCAAGACTGGAGCTCCTTGCAGATCTGAGCGCCTTGCCAAGTACAACCAGCTTCTTAGGATCGAGGAGGAGCTTGGTGCTGCTGCCGTCTATGCCGGAGCCAAATTCCGTGCACCAGTGGAGCCCTACTAG</cdnaseq>

Protein Sequence

<aaseq>MAATIQSVKARQIFDSRGNPTVEVDICCSDGTFARAAVPSGASTGVYEALELRDGGSDYLGKGVLKAVDNVNSIIGPALIGKDPTEQTVIDNFMVQQLDGTKNEWGWCKQKLGANAILAVSLALCKAGAIIKKIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFKEAMKMGVEVYHNLKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTAIEKAGYTGKVVIGMDVAASEFYTEEQTYDLNFKEENNDGSQKISGDSLKNVYKSFVSEYPIVSIEDPFDQDDWVHYAKMTEEIGDQVQIVGDDLLVTNPTRVAKAIKDKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGAAAVYAGAKFRAPVEPY</aaseq>

Gene Sequence

<dnaseqindica>1..69#650..713#898..962#1550..1597#1677..1763#1870..1950#2052..2153#2241..2321#2399..2473#2864..2926#3030..3107#3187..3381#3469..3519#3603..3691#3789..3840#3973..4029#4235..4315#ATGGCGGCGACCATCCAGAGCGTGAAGGCCCGCCAGATCTTCGACAGCCGTGGCAACCCCACCGTCGAGGTACGCCGCGGGTCCAGTTTCGTTCTGTCTAGGGCGTCGCGGCGATTGAATCGGGTGCTTTCTTAGCGCGATGCCGCGATCTTGGTCTGTTGGTTAGAGCGGTTCGGATTGGAGTTCCCGTAGTAGGGTTTGTTTAATCACTGTGTGCGATGTGGCTTACCGGCTTAGAGTCCTGAATTGTGTGGTTTGTGAATTGTAAATGTTGATGCCCCCTGCTACGATTTGGCTATGCGAAGGGTGGATTGGGCTCTGATCGGTTTATTTCTGTCGGCTCAGTCGGCTTTGGCTTTGAGTTATGCTCGATCCCTACTCGATCCAATCTACTGCTGTGTACCTAGAGATTAGTTGCACGTCGAACTGCGCTTTGATTTTGGAATTTGCGCTATATCTGCAACAGATGGTTGCTTTGAACATATTGCCACTGTTAGATATCGTGTTGCTTGGTGCTTTTGTTCCTGGATTTCATGATATGAGCATACAGTTGTTACAGAATTCGTTTGTTTTATTGGACTAAATCAATAGTTTTGAATGGTTTTGGCAACTAAATGGTCTTACTAAAATATGATGCTTGTGTTGCCAGGTTGATATTTGCTGCTCGGATGGAACATTTGCGAGGGCTGCTGTGCCTAGCGGTGCATCTACTGGTGAGTTGTTTGTTTATCAGCAACTTCTTTTCCCTACTGTGGTTCTAGCCTTGATACATCTGGTTAATTGAACCAACTTAGTTTTTGATAGTCCTTTTCAGCTTATATCAACTATATGGAAAGCTTCGGGTGACAATTTTATTAGTTAGAAAGTGAACTGATGCTATTTTCTGCTACACTATAGGTGTATATGAAGCTTTGGAATTGAGGGATGGTGGTTCTGATTACTTGGGAAAGGGTGTCCTCAAGGTTTGTCCTTTAACACATTCCTGTCAGAAGATTTCGGTTAGCTGTTTTCTGCAATTAATCTATAGTATCTTTGATAGCTTTGTGACTTTTTGTATCCACTACTTCCGTGTTGTCATCTGTGCCTAACATATTGTTATTGTTTTTTCATTTGTGCTGCATTTTTGTGGTTCTTTACAACTAGCACGGATGATTATTTAATTGCTTATGCAGCTATGCACTCACAATGCAGGCCTTGTATATTCTATAGTCTATACTAATAAAGATTGTGGAATGATCACCTTAGATGTTTTCTATATGTAGCGTTGCACAAGCAAGTTTCACTTTCATTTCACCAGCTAATATATTCAACATTCATTATTCTTAGAGCTGTCTCTTTCTGAATGTTTTGGTCTGAATGACAGAAAGTGCTATTAATATTTTGTATTTCATTCCAACTACTCTGAGATAGTCATTGTGTGCAAGTGCAATTGTATGACCTACTTTACTTAGCCCCCCCTCTTGCATCATGCGTTGTGCGATCTTTTAAATTTTTAACATTTCTATGGATGTCTGCCTTCATCTTTACATGCCGTTTGTTATTTCAACAGGCTGTTGACAATGTGAACTCTATTATTGGACCAGCATTGATCGGCAAGGTATGTGTTCCCTACCATATTTCTGTGCATATTACAGTATTAAATTCATGTATGTTTACATATTCTGTTGGCTTTGCAGGACCCTACAGAACAGACTGTCATTGACAACTTCATGGTTCAGCAACTGGATGGAACCAAAAACGAGTGGGGCTGGTGCAAGCAAAAGGTACTGCAGAATTGTTGTGGATGTTGTGTTATGTTGTAGCGCTGCATGACACTGCACTCATTTAATAGTGCTAACTGCTATCTGACTATAATTTTTTGAAATTCAGCTTGGTGCTAATGCTATCCTGGCTGTCTCACTTGCTCTATGCAAAGCCGGAGCTATTATCAAGAAAATTCCGTTGTATCAAGTATGGGAGAACTCGTTTTATATTTTTATATTTGAATGCACACAGTTTGTTCTTTCCACTAACCAGTTTTCTTATACCATTACGTGCCTTCTATATTGCAGCACATTGCTAACCTTGCTGGTAACAAGCAACTTGTTTTGCCTGTGCCTGCTTTCAATGTCATCAATGGTGGATCACATGCTGGAAACAAGCTAGCTATGCAGGCAATGCCTCAACAAAAATGCACATATAATAATTCTTCTCTAGTGATTTTTCCAGAGATTGTAGTTTATGTTTGAAATTCCGTACAGGAGTTCATGATCCTCCCTACTGGTGCTTCATCTTTCAAGGAGGCTATGAAGATGGGTGTTGAAGTATACCATAACTTAAAGGTCACTTTCTTGACATTTCTTTAAGGAACTGGATTGTTGTGCAAAAATTAACACTCAATATATCTCATGTTCTACAGTCTGTTATCAAGAAGAAGTATGGGCAAGATGCTACTAATGTTGGTGATGAAGGTGGTTTTGCTCCAAACATTCAGGTTGTTGTTTGTTTGTTTGCACATGTCTGTCATATGTACTTTCAAATTCTTTTACACGTATTACCTGTTATATTTTCCCTCCAACACTCCAAAGCATATTTATCTTTTTTTCTTGCTTTAATTTATATGTTGTTTCGGTTTGCAACCTAGTTGCAGTCTCTTCAAAATGTGAGCTCAGAAACTATATTTCAGTACCATAGAAGTTTGTTAAGAGTTTTGTCCTATTTGTTTCATACTATTATTTTGGATATACAAGAGCATCTCTATATCATATTGAATTTTGAACTGTGTAAGTAAGGAATCGCATTGTCCAATCTGCCGTTATAAAATATTAGATATTAGCTAGTAGTCAATTCTGAATTCATATATTTGCCATCTATGGAATTGTAGGAAAACAAGGAGGGCCTTGAGCTTTTGAAGACTGCAATTGAAAAGGCTGGATACACTGGCAAGGTTTGTTGAGCATACAACTGGCTAAATTAATTTGATGGTTATGGGCTAAGGCACTTCAATTTCTGACATTTGGTATGGAATGTTATTTGTACTGATATGCCAGGTTGTCATTGGGATGGATGTTGCTGCTTCAGAGTTCTACACTGAGGAGCAAACCTATGATCTTAACTTCAAGGAAGAGGTAAACGTCAGTTTTTTCCCCTTGAAATTTTTTGAAGTTTTAATGCCCCCATTTATGATGCTTGTTTCCTTGTGTTTAGAACAATGACGGTTCCCAGAAGATATCTGGAGATAGCCTGAAGAATGTGTACAAGTCATTTGTTAGTGAATACCCAATTGTCTCGATCGAAGACCCATTTGATCAGGATGACTGGGTTCACTATGCCAAGATGACCGAAGAAATTGGAGATCAAGTGCAGATTGTTGGAGATGATCTCCTTGTCACCAACCCAACTGTATGTTACTCGCTAATCATATGACTTATATACTGCTTTTTTCAGTTTCCTTGTTGGCTTCAATATTCAAACCAATTTGACTTGCAGAGGGTAGCCAAGGCAATTAAGGACAAGGCCTGCAATGCTCTTCTCCTTAAGGTACATACTGTTTAAGGTTGTATTCAAATTAGCCATATCGGTTTGCCAGCGTAATAATCTTGTGACCTGTTTATATGGTTTAGGTTAACCAAATTGGATCTGTTACTGAGAGCATTGAGGCTGTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGGTATGCATATGCTGTTTTTTTTATTTACTGTTCTGCGTCTTGTATGTCCTACCTTCTTTCCTGACTTCAATATTTAATTTCCTTGATTTGGTTTCAGTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCACGGTATATACTTTGCGTGCCTTCTTTAGTGTGCTTCAACAAATATAGGCCGCTTATCTTTTGAAAGAGCTTGTGAGATCCGCTCTTAATGGTGATGATAACTTGGAAATGCATCAATGTTTTGTCATGAAACAGGGCCAGATCAAGACTGGAGCTCCTTGCAGATCTGAGCGCCTTGCCAAGTACAACCAGGCAAGAATATGTTCAACCCTCTTTTGCTATACTTCTGTACTGTTGGTTGATGTGCAAAATTACACTAGTTCTGCTGCTATACTTTGTACATGTTGATTTCAGTGCGTTTGTGTAAACTTGCCTGGTGTTGGCTAACGACACTTTTAATTTTTGAGGTTTTGGTGCATCTAACTAACTCATATTTCCCCTCTTTAAATTGGAGCAGCTTCTTAGGATCGAGGAGGAGCTTGGTGCTGCTGCCGTCTATGCCGGAGCCAAATTCCGTGCACCAGTGGAGCCCTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011109

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