BGIOSGA011305

From RiceWiki
Revision as of 09:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011305| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011305, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011305

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011305, complete gene.

LocusTag

OS03G0190300

Ensembl Transcript ID

BGIOSGA011305-TA

Ensembl Protein ID

BGIOSGA011305-PA

Length

2938

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5113706..5116643

Sequence Coding Region

5116587..5116643,5115342..5116500),complement(5114933..5115079,5113706..5114217

Genome Context

<gbrowseImage1> name=IndicaChromosome03:5113706..5116643 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:5113706..5116643 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCAAGATCAGCTGCTTCTCTGCTCTTCTCGCCGGCAAGAGGAAGTTATCAAAGGTTACGAGCAAGATTGGTTACGGCAAGAAGTCTGGTGGCAATGAGTTCCAGAAGGTGAAACCGGTGGAGTTCATGGAGGGGACGGACACCGTCGACATCGGGAAAGGCGGTGGTGACATTGTCCTGGCATGTGACACAAAGGTTGTCGCTTTCAACGCCGCTGAGTTGGCTTGTGAAGGCCGCGACAAGGACGATGACATGGTCTCGGTGAAGAGGGACACATCTGACGTCGACCTCGTCGCCGGCGGCGACGCAGACTCTTCCGGCTACAACAGCGACGCCGCCGACAAGGATGCTAGCAGCGCCGCCGCAGCACCGGACGCTAGCGAGCCCGGGGTTGGCCTCATGGTGCCGGCCATGGCATCGAGGCTGGAACGCTCGTGCTCCAACATCGAGACGGCGAGGCGTGGCTCGAAAGCGTTCGAACTTCCGGCGAAGTCGCTCTCCTACGGCGACCTCATGGCCTTGCCTGCCGGTGGCTCAGCCACAGCCACCCCAGTCGGCGCGCCGGACGACAGCCCAGCCGCGTCCGTGAAGACGACGTGCAGCGCCGACCACGTCATGCTGAAGAAGTGTTCGTCCAGCCAGGTGCTCCCGTCCCGGAGCCGGAAGCTGTGGTGGAGGCTGCTCCTGCGAAGCCACCGGAACCTGCACCGGCCGGCGGCGACCGTACCAGCAGCGGTGCCGTCGGCGGAGCAGCGGCACGACGGGTACGCGTCCGACACGCTCGACGCGGGCGCCGCCACGGCCGACGTCAAGAACAAGGGGATCGCCGTAGGCCACGAGCCCATCCCGAACCAATGGATGGCGTTCTCGTCGGAGGCCACGTCGCTGGACCGGGTCAGCGCGTGGGTGAACAGCCTCGTGGACAACCCGTTCAAAGCCAACGAGGAATGCATCGTGGAGCACGACGACGATGACGACGACACGGCTCGCCCGCATTGCACGGAGATCGGGGAGCCCTCGTCGTTCGGCGGCAAGTTCCCCGCCCAAGCGCGGCGGCGCATGGCCGGCGAGGCCATCAAGGCGAACAGCATCATACAAACGCTCACCACGTCCTCGTCCGTGGCGCACATATCGGGGATGGGGCTCACTGTCATCCCGGTGATCTCGCCGTTCTCCAGCCTCCGGGCAGTCAATCTGTCCGGCAACCTCATCGTTCAAATATCATCTGGATCATTGCCTAAGGGATTGCACTCACTCGATCTGTCGAGGAACAAGATATCTGTCATCGAGGGGCTGCGCGAACTGACGAGGTTGCGCGTGCTCAACCTCAGCTACAACAAGATTTCACGGATTGGTCACGGGCTGTCGAACTGTGGGGCGATCAGGGAGCTGTACCTCGCCGGGAACAAGATCAGCGACGTGGAGGGGCTGCACCGGCTGCTGAAGCTGGCGGTGGTGGACCTGAGCTTCAACAAGATCACCACGACGAAGGCGCTGGGGCAGCTCGTCGCCAACTACAGCTCGCTGAGGGCTCTCAACCTCGTCGGCAACCCGGTGCAGACAAACATCGGCGACGACGCGCTCCGCAAGGCGGCGTCGGGCCTCCTGTCGCGGCTCGAGTACCTGAACAAGCAGCCCGTGAGGCCGCAGCGCGCGCGGGAGGCGGCCAAGGACAGCGTCGCCAAGGCGGCGCTCGGGAACGGAGGGTGGAGCTCGCGCAGGCGGCCGACGCCGTCGTCGCGGCGGCTGAGCCAGAGCCCCGGCTCGTCGGTGAAGAACCGGGGGAGGGATAATGGGAGCGGCAGCCATAGGGGCAGCAGGAGCAGGTCCAAGAGCAGGCCTCACCAGGGCTTCAGCCTTGCAAGGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MTKISCFSALLAGKRKLSKVTSKIGYGKKSGGNEFQKVKPVEFMEGTDTVDIGKGGGDIVLACDTKVVAFNAAELACEGRDKDDDMVSVKRDTSDVDLVAGGDADSSGYNSDAADKDASSAAAAPDASEPGVGLMVPAMASRLERSCSNIETARRGSKAFELPAKSLSYGDLMALPAGGSATATPVGAPDDSPAASVKTTCSADHVMLKKCSSSQVLPSRSRKLWWRLLLRSHRNLHRPAATVPAAVPSAEQRHDGYASDTLDAGAATADVKNKGIAVGHEPIPNQWMAFSSEATSLDRVSAWVNSLVDNPFKANEECIVEHDDDDDDTARPHCTEIGEPSSFGGKFPAQARRRMAGEAIKANSIIQTLTTSSSVAHISGMGLTVIPVISPFSSLRAVNLSGNLIVQISSGSLPKGLHSLDLSRNKISVIEGLRELTRLRVLNLSYNKISRIGHGLSNCGAIRELYLAGNKISDVEGLHRLLKLAVVDLSFNKITTTKALGQLVANYSSLRALNLVGNPVQTNIGDDALRKAASGLLSRLEYLNKQPVRPQRAREAAKDSVAKAALGNGGWSSRRRPTPSSRRLSQSPGSSVKNRGRDNGSGSHRGSRSRSKSRPHQGFSLARK</aaseq>

Gene Sequence

<dnaseqindica>1..57#144..1302#1565..1711#2427..2938#ATGACCAAGATCAGCTGCTTCTCTGCTCTTCTCGCCGGCAAGAGGAAGTTATCAAAGGTTGGTGGATTATATTCTTAGGAGACCCAGTTCTTTGATGAATTTTGGTTTAAGTTTTTGTTTCTTATCAGCTCTGAACATGGCAGGTTACGAGCAAGATTGGTTACGGCAAGAAGTCTGGTGGCAATGAGTTCCAGAAGGTGAAACCGGTGGAGTTCATGGAGGGGACGGACACCGTCGACATCGGGAAAGGCGGTGGTGACATTGTCCTGGCATGTGACACAAAGGTTGTCGCTTTCAACGCCGCTGAGTTGGCTTGTGAAGGCCGCGACAAGGACGATGACATGGTCTCGGTGAAGAGGGACACATCTGACGTCGACCTCGTCGCCGGCGGCGACGCAGACTCTTCCGGCTACAACAGCGACGCCGCCGACAAGGATGCTAGCAGCGCCGCCGCAGCACCGGACGCTAGCGAGCCCGGGGTTGGCCTCATGGTGCCGGCCATGGCATCGAGGCTGGAACGCTCGTGCTCCAACATCGAGACGGCGAGGCGTGGCTCGAAAGCGTTCGAACTTCCGGCGAAGTCGCTCTCCTACGGCGACCTCATGGCCTTGCCTGCCGGTGGCTCAGCCACAGCCACCCCAGTCGGCGCGCCGGACGACAGCCCAGCCGCGTCCGTGAAGACGACGTGCAGCGCCGACCACGTCATGCTGAAGAAGTGTTCGTCCAGCCAGGTGCTCCCGTCCCGGAGCCGGAAGCTGTGGTGGAGGCTGCTCCTGCGAAGCCACCGGAACCTGCACCGGCCGGCGGCGACCGTACCAGCAGCGGTGCCGTCGGCGGAGCAGCGGCACGACGGGTACGCGTCCGACACGCTCGACGCGGGCGCCGCCACGGCCGACGTCAAGAACAAGGGGATCGCCGTAGGCCACGAGCCCATCCCGAACCAATGGATGGCGTTCTCGTCGGAGGCCACGTCGCTGGACCGGGTCAGCGCGTGGGTGAACAGCCTCGTGGACAACCCGTTCAAAGCCAACGAGGAATGCATCGTGGAGCACGACGACGATGACGACGACACGGCTCGCCCGCATTGCACGGAGATCGGGGAGCCCTCGTCGTTCGGCGGCAAGTTCCCCGCCCAAGCGCGGCGGCGCATGGCCGGCGAGGCCATCAAGGCGAACAGCATCATACAAACGCTCACCACGTCCTCGTCCGTGGCGCACATATCGGGGATGGGGCTCACTGTCATCCCGGTGATCTCGCCGTTCTCCAGCCTCCGGGCAGTCAATCTGTCCGGCAACCTCATCGGTAAATTATCACGTTCTTTTCTCGTTAAGATAAATATTTTATATCGATTTTCGTTAGCATACTTTTCAAACTACTAAACGGCACAATCCGTTCGAAAATTTTTTATATAGAAGTTGCTTTAAAATATCAAATATATTCATTTATCAAGTTTATAATAATTAAAACTTAATTAATTATGTGCTAATATTTTTTTTCATTTTACGTGCGGCAATTTAATCTTCATGTTTCTCGTTCTTGGCTGATCAATCCATTCGTTCTGCAGTTCAAATATCATCTGGATCATTGCCTAAGGGATTGCACTCACTCGATCTGTCGAGGAACAAGATATCTGTCATCGAGGGGCTGCGCGAACTGACGAGGTTGCGCGTGCTCAACCTCAGCTACAACAAGATTTCACGGATTGGTCACGGTAAGCATTTCGTCAGATATCACAGCTGTTTCTTTCAGTAAGTTTATTGCTACTGGTGAAAGCCAGGCTTTGCGTGGATCTTGTTCATTGTGCAATGCTCGTGTGCACTTCTGGATCGGTGGCAGTCGATAGACATTGGGCCGGGCTAAGTACTAGCATGGTCCATGGTACAGACTTTAGTAGTGCACAGTAACGATGCGTCATGTCATGCTCTGAAACTAATGCTGGCACACACACTGTGACACTGAAGGGATCGATACAAGGTTCATGTGCTTCACCTTATTTACCGGCAACTCCAGATTGATAAGCAGAAACGAGTACATACACAGGGCGCCGCATGCTGACACCCATCAGATATCCAATCTAGGCATATCACATTCTTACCTTTCGGATAGTACAATTCGTACATTCTGATAGACGATACTCGTGACCGTGTACCATGCTCCTTTCGGCCAACTTCTTCAGAACCTTGGGAATCGAGTGGATGTCCCGCAGGTTTGCTCGTCCCTAGAAAAGAAAAGAAACCGCTGTGCGCGAGCGTGACTGGATGCCACATCGGTCCGCTCTGGTCCATCCTACGCACTGCTTAGCTTGTTTCCATGCACCATGCGAGCTAGTATCACATGAGACATGACAGTGTACCCTGCAGTTAATTATACTATTCGTGTGAATTGAATCAAAAGAAGTGAACAATTTGTGGTTTCGATTCGTTCAGGGCTGTCGAACTGTGGGGCGATCAGGGAGCTGTACCTCGCCGGGAACAAGATCAGCGACGTGGAGGGGCTGCACCGGCTGCTGAAGCTGGCGGTGGTGGACCTGAGCTTCAACAAGATCACCACGACGAAGGCGCTGGGGCAGCTCGTCGCCAACTACAGCTCGCTGAGGGCTCTCAACCTCGTCGGCAACCCGGTGCAGACAAACATCGGCGACGACGCGCTCCGCAAGGCGGCGTCGGGCCTCCTGTCGCGGCTCGAGTACCTGAACAAGCAGCCCGTGAGGCCGCAGCGCGCGCGGGAGGCGGCCAAGGACAGCGTCGCCAAGGCGGCGCTCGGGAACGGAGGGTGGAGCTCGCGCAGGCGGCCGACGCCGTCGTCGCGGCGGCTGAGCCAGAGCCCCGGCTCGTCGGTGAAGAACCGGGGGAGGGATAATGGGAGCGGCAGCCATAGGGGCAGCAGGAGCAGGTCCAAGAGCAGGCCTCACCAGGGCTTCAGCCTTGCAAGGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011305