BGIOSGA011323

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Revision as of 09:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011323| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011323, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA011323

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011323, complete gene.

LocusTag

OSJNBA0032G08.9

Ensembl Transcript ID

BGIOSGA011323-TA

Ensembl Protein ID

BGIOSGA011323-PA

Length

4777

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4781498..4786274

Sequence Coding Region

4786196..4786274,4785941..4786038),complement(4785799..4785864,4785662..4785723),complement(4785428..4785506
,4784944..4785048),complement(4784755..4784865,4784535..4784672),complement(4782846..4782920
,4782602..4782722),complement(4782366..4782520,4782204..4782278),complement(4781908..4782111
,4781498..4781614

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4781498..4786274 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4781498..4786274 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACTGGTGTTTCTGTTGAGAACATAAACCCCAAGGTTATACTAGGGCCATCATCGATCGCTGAGTGCATAGTCACAAATGCTAGAAGAGAAATTAATAGATATCTCACATTTTTCTTCCAGCACCTACAACAGCAGCTACAGACACAACCTGGTTCTCTTCCATTTGATGAGATCGTGTATTGCAACATCGGGAACCCTCAGTCCTTGGGTCAAAAACCAATCACATTCTTCAGGGAGGTTCTTGCACTTTGCAATCATCCAAATCTGCTGGAGAGAGAGGAAATTAAATCATTGTTCAGCACTGATGCTATTGCTCGGGCAAAGAAAATTCTTTCCATGATTCCTGGAAGAGCCACCGGGGCATATAGTCATAGCCAGGGTATCAAGGGACTGCGTGATGAGATTGCTGCTGGGATTGCCTCCCGTGATGGTTTCCCTGCAAATGCAGATGATATATTCCTAACTAATGGAGCAAGTCCTGGTGTACACATGATGATGCAGCTGCTGATAAGGAACAACAGAGATGGCATTATGTGTCCAATTCCTCAATACTCATTGTACTCAGCATCCCTAGCACTTCATGGCGGAGCTCTTGTGCCATATTATCTTGATGAATCCTCAGGATGGGGTTTGGAGGTTTCTAAGCTTAAGAATCAACTTGAAGATGCCAGGTCAAAAGGCATAACTGTTAGGGCGTTGGTGGTGATCAATCCTGGAAATCCTACTGGACAGATTCTTGATGAGCAACAGCAATATGAGCTAGTAAAGTTCTGCAAGGACGAGGAACTTGTTCTTCTGGCGGATGAGGTATACCAAGAGAACATTTATGTTACCAACAAGAAGATCAACTCTTTCAAGAAGATAGCAAGATCCATGGGATACAATGGAGACGATTTACAATTAGTATCATTGCATTCTGTTTCTAAAGGATATTACGGAGAGTGTGGCAAGAGAGGCGGTTACATGGAGGTCACTGGCTTCAGCACTCCAGTTAGAGAACAACTCTACAAAATTGCATCTGTTAACTTGTGTTCAAATATCACCGGCCAGATCCTTGCGAGCCTCATAATGGATCCACCAAAGGCTGGGGACGCATCTTATGACCTCTACGAGGAAGAGAGAGACAACATCCTAAAATCTTTATCTCGTCGTGCAAAGGCAATGGAGTCTGCATTTAACAGTATTGATGGAATTACATGCAACAAGACGGAAGGGGCGATGTATCTGTTCCCACGGATTTATCTACCACAGAAGGCAATTGAGGCTGCCAGGGCTGTCAACAAAGCACCTGATGTATTCTACGCTCTACGTCTTCTTGATACCACCGGCATCGTTGTGACTCCTGGATCTGGTTTTGGACAAGTTGCAGGGACATGGCACGTGAGATGCACGATCCTGCCGCAGGAGGAGAAGATACCTTCGATGATCTCCCGCTTCAGGGAATTCCATGAGGAGTTCATGTCACAGTATCGCGACTGA</cdnaseq>

Protein Sequence

<aaseq>MATGVSVENINPKVILGPSSIAECIVTNARREINRYLTFFFQHLQQQLQTQPGSLPFDEIVYCNIGNPQSLGQKPITFFREVLALCNHPNLLEREEIKSLFSTDAIARAKKILSMIPGRATGAYSHSQGIKGLRDEIAAGIASRDGFPANADDIFLTNGASPGVHMMMQLLIRNNRDGIMCPIPQYSLYSASLALHGGALVPYYLDESSGWGLEVSKLKNQLEDARSKGITVRALVVINPGNPTGQILDEQQQYELVKFCKDEELVLLADEVYQENIYVTNKKINSFKKIARSMGYNGDDLQLVSLHSVSKGYYGECGKRGGYMEVTGFSTPVREQLYKIASVNLCSNITGQILASLIMDPPKAGDASYDLYEEERDNILKSLSRRAKAMESAFNSIDGITCNKTEGAMYLFPRIYLPQKAIEAARAVNKAPDVFYALRLLDTTGIVVTPGSGFGQVAGTWHVRCTILPQEEKIPSMISRFREFHEEFMSQYRD</aaseq>

Gene Sequence

<dnaseqindica>1..79#237..334#411..476#552..613#769..847#1227..1331#1410..1520#1603..1740#3355..3429#3553..3673#3755..3909#3997..4071#4164..4367#4661..4777#ATGGCCACTGGTGTTTCTGTTGAGAACATAAACCCCAAGGTTATACTAGGGCCATCATCGATCGCTGAGTGCATAGTCAGTAAGTTGTGTTCTTTTGTGGCTTGCTGATTCATATTCTTTATTTCAGGTTTTACGATGTGAATATGCAGTTCGTGGAGAGGTTGCCATCCATGCTCAGGTTTCGTGGTTCAGTCCATCCATGTTCTGGAAGTCAATTTCAATTTATTCTTTTTCAGCAAATGCTAGAAGAGAAATTAATAGATATCTCACATTTTTCTTCCAGCACCTACAACAGCAGCTACAGACACAACCTGGTTCTCTTCCATTTGATGAGGTCATTGACAACTATAATTTGCAGATCACGTGAATAATCGGTAGATGATTCATAAATTTTCAACTATTATATGCAGATCGTGTATTGCAACATCGGGAACCCTCAGTCCTTGGGTCAAAAACCAATCACATTCTTCAGGGAGGTCTGTAAATATTAGACACCCAAAACTTCATCTTTCCTTTTTATGCTCTTTCAGTATTTACGAGTTATGTTACAGGTTCTTGCACTTTGCAATCATCCAAATCTGCTGGAGAGAGAGGAAATTAAATCATTGTTCAGGTAAACATCAACTGCATGCCATGATTCATTACCAAGCTATGACTATACATATATATTTATGTTCTACACTTTCTACATTTCTAATAAAAAGGTATGTAAGCACATTAGGGTATTTCATTTATGTATGATATAAATGTTTCTTCATCTCTTTGCAGCACTGATGCTATTGCTCGGGCAAAGAAAATTCTTTCCATGATTCCTGGAAGAGCCACCGGGGCATATAGTCATAGCCAGGTAACCATCTGCCAATTCACTCAACTAGGAGCATCTTGAGTTCATAATTTTCCTTATAGTAAGTTTCACTATAACTATGTTGTCAAAACTATCGATTTCTGCAAATTTAACTACGCAATAAGAATGCAAGAATAGCTGATGATCTTATCAGAAAATTGCAACCTTATTTGATTGGTCTGGATCCATCTGTCACACACACATGCAATACTCATGTCGTTGCAAGTTTGGGCCTACACATCAGAAACCAATAGGAGATAAGGCTGCAGGTTTCTGATAAAAATCCTCTGCTATTGTTGCAGTTGTGTGAAATATTCAACAAAAGATGCAGATTTAAATCAAACACTGCAGTTTTTGTGGAATTTACTCTTCTTTATCCTAGGGTATCAAGGGACTGCGTGATGAGATTGCTGCTGGGATTGCCTCCCGTGATGGTTTCCCTGCAAATGCAGATGATATATTCCTAACTAATGGAGCAAGTCCTGGTGTATGTCCTACCTTGGTTATTTCTGAAGAAACAGGAATGTAAGATATTCCAGTCTGACTTATGCTTTCCCTCTTCTAGGTACACATGATGATGCAGCTGCTGATAAGGAACAACAGAGATGGCATTATGTGTCCAATTCCTCAATACTCATTGTACTCAGCATCCCTAGCACTTCATGGCGGAGCTCTTGTATGTAGTTTATTTGTCTGACGTTATAACTTCAAGCTAGCTACTCGATGCAGCGCAATAGCCTGAAGACATTTCATTTCAGGTGCCATATTATCTTGATGAATCCTCAGGATGGGGTTTGGAGGTTTCTAAGCTTAAGAATCAACTTGAAGATGCCAGGTCAAAAGGCATAACTGTTAGGGCGTTGGTGGTGATCAATCCTGGAAATCCTACTGGACAGGTTTGCTCTCACCGCTTCTCCTATTGTGTGCGATTTAAAACATCTTATATACAATTATACAAGTATCTATTATATAATTAAAGGAATAGAAAAAGGAGCCTCCACGTTCGCTCTCATGGCCTAGAAATTCTCACATTAAACGGAGAAAAAGAAAAAACAGAGTCCATATAGAAATACAATTTAGAAATAGCTGAAATTCGGAATTAAAAAATAAGGAATATTAAAAGAGGAGACTAGAGTCCATATAGAAATACACTTTAGAAATAGTTGAAATTCGGAATTAAAAAATAAGGAATATTAGAAGAGGAGTATAGAGTCCATATAAAAATACAATTAGGAAATAATAGAAATTCAAAATTAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTCCATATAGAAATACAATTAGGAAATAATAGAAATTCTGAATTAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTCCATATAGAAATACAATTAAGAAAAAAATAGAAATTCAGAATTAAAAAATAAGAAATATTAGAAGTAGAGTATAGAGTCCATATAGGAATTTAAAACTAACTAAAATTCGGAAAAAAAAAGGAGCCTCCACGTTCGCTCTGATGACCTAGAAATTCTCACATTAATCGGAGAAAAAGAAAAAGCAGAGTCCGTATAGAAATATAATTTAGAAATAGCTGAAATTCGAAATTAAAAAATAAGGATATTAAAAGAGGAGACTAGAGTCCATATAGAAATACAAATTAGAAATAGCTGAAATTCGGAATTAAAAAATAAGGAATATTAGAAGAGGAGACTAGAGTCCATATAGAAATACATTTAGAAATAGTTGAAATTCGGAATTAAAAAATAAGGAATATTAGAAGAGAAGACTAGAGTCTATATAGAAATAAAATTAGGAAATAACTGAAATTCGGAATTAAAAATAAGGAATATTAAAAGTAGAGTATAGAGTCCATATAGAAATACAATTAGGAAATAACCGAAATTCGGAATTAAAAATAAGAAATATTAGAAGTAGAGTATAGAGTCCATATAGAAATACAATTAAGAAAAAAAATAGAAATATGGAATTAAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTTCATATTGGAATTTAAAACCAACTAAAATTCGGAATAAAAAGGAGCCTTCATGTTCGCTCTCATGGCCTAGAAATTCTCACATTAATCAGAGAAAAAGAAAAAGCAGAGTCCATATAGAAATACAATTTAGAAATAGCTGAAATTCAGAATTAAAAAATAAGGAATATTAGAAGAGGAGACTAGAGTAGTTATTACACATTAGTAGTTTCGAAAAGTTATTGCAAAATTTAAAATTATGTTGTCATTGTAATATATTTTATAATAATATAATGAGAAAACATATATGCTTTTATATGAGAGAAAATATAATGATGCTAGCCGCGCAATCTACGCGGGCCACCATGCTAGTTCATGATTAAGACAAAGTGGCACTGTTATTTTGTGATGTTTTTCATGTCAGTAAGCATATGTTCCTTGATCCGAAGAAGTATTTAGGTTCAACTGATATAAATATTCCAAAAATCATAATTGAAATGTTTTTACATTGTTGTTAAGATTCTTGATGAGCAACAGCAATATGAGCTAGTAAAGTTCTGCAAGGACGAGGAACTTGTTCTTCTGGCGGATGAGGTAAGGCTAGTCATGTTCAAAGGTGTCAGTGTGTTGAGTGATATAATAATGTTAACAAAGTATGATGTTAACAAACACAAGAGAAAACTGTCCAGATAATCGTTTTTTGGGGGGTGTTGATAGGTATACCAAGAGAACATTTATGTTACCAACAAGAAGATCAACTCTTTCAAGAAGATAGCAAGATCCATGGGATACAATGGAGACGATTTACAATTAGTATCATTGCATTCTGTTTCTAAAGGTGAAATCCCATCATCCGCCTTTCTTTCTCCAAGTACATTGTAACTCCTTACCACATAGATATTTTTTTGCCTGCCATCAGGATATTACGGAGAGTGTGGCAAGAGAGGCGGTTACATGGAGGTCACTGGCTTCAGCACTCCAGTTAGAGAACAACTCTACAAAATTGCATCTGTTAACTTGTGTTCAAATATCACCGGCCAGATCCTTGCGAGCCTCATAATGGATCCACCAAAGGTGCAATAACATATCTGTCCTTACACGAAATGTAATTGCCAATATACACTAGATTCATAACACAGAGAGACCATGCATATTGTGCAGGCTGGGGACGCATCTTATGACCTCTACGAGGAAGAGAGAGACAACATCCTAAAATCTTTATCTCGTCGTGCAAAGGTGTGTGGAGTTTACTTTTAACAGATTCACTTCTTGCTATCTATGCAGACACTTGAGCTAAGACATCATTTTGTCTGGAATCTGGATCACAGGCAATGGAGTCTGCATTTAACAGTATTGATGGAATTACATGCAACAAGACGGAAGGGGCGATGTATCTGTTCCCACGGATTTATCTACCACAGAAGGCAATTGAGGCTGCCAGGGCTGTCAACAAAGCACCTGATGTATTCTACGCTCTACGTCTTCTTGATACCACCGGCATCGTTGTGACTCCTGGATCTGGTTTTGGACAAGTGAGCTACTTTCTACTCTTGATCTTTGAACCATAGTGATATGTGCTGTCTGAATCCCACAGAATGATAAGTGAACTGTTTTGGGGAACGGCTGAAGCTCACGCAGCACAATCTATATTCCTGAAGAGTCTGGTAGTAGTAGTAGTCTCGTTCTACAAGAACAGATAGCACCAATTAAAAAAAAAACAATAACAGATAGCAACCGTTTTTTCTACCATTTCAGATCATCAGATGTTATCTGTTCACCTGCAATTCTGAATTCCTGACCACTCAAGTTTGGTCCTTTGTGAAAGGTTGCAGGGACATGGCACGTGAGATGCACGATCCTGCCGCAGGAGGAGAAGATACCTTCGATGATCTCCCGCTTCAGGGAATTCCATGAGGAGTTCATGTCACAGTATCGCGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011323