BGIOSGA011524

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Revision as of 09:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011524| Description = ESTs AU031435(E61570)| Definition = Oryza sativa Indica Group BGIOSGA011524, complete gene.| tag = | tid = BGIOSGA01...")
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Gene Name

BGIOSGA011524

Description

ESTs AU031435(E61570)

Definition

Oryza sativa Indica Group BGIOSGA011524, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA011524-TA

Ensembl Protein ID

BGIOSGA011524-PA

Length

6256

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1955297..1961552

Sequence Coding Region

1961131..1961552,1960028..1960241),complement(1958463..1958534,1958217..1958288),complement(1957993..1958091
,1957815..1957886),complement(1957618..1957732,1957433..1957501),complement(1956609..1956912
,1955823..1955934),complement(1955297..1955740

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1955297..1961552 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1955297..1961552 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGCACCTGCTGGTTGGCGAGGAGGCAATGTTGGTTCCGTTGGAGGTCTCCCGCAAGCTACTCCAGGAGCAACTGCTCCACAACAAGCAACACCGGGTGGATTTGGTCTTACATTGTCTAGTACAATGGGCATGGCTCCCGGACAACAGGCACAAGGAACGCCTCCTTCGTCAATGCCACCACAAAGCAACAGTGCTGTATCAGCTCAAGATTCGAAAGCTTTGGTGCTGTCTGGAAATGGCTCTGCCAGTGGCTTAGGAGCAAGCAATGACATCTTCTCTGCTCTTACTCAGCCTAAGTCGAATGTATCCACACTTTCATTTCCGACGAGCATGGCTCCTAATTCATCCAGTTTTATAGTCCACACCATCTGGCTCCCAGAACCTGTTGAATCTAGCTCAGTTTGGTTCTCAACAAGGACTGCACACAAGGGTCCTGGAGCAGCTGGGATGCCTGCTACTGGTGTGCGGCAACCTTTGCCACCACATTTGCAGGCACAGATGGATGGTGCTAACAGACCANGGCAACCAAGACCTCACATGCCTGGTATGGATAACCATGCAGCACCTCAAGCAAATAAAGATGACGGAAGTGGAGCGAACTCAGCTGTGCAGGAGGATGCCCCTAAGAAGGTTGAGGTGGAGAAGCAAGTCCTAGATTCCAGAGAGAAACTAGAATACTACCGTACAAAGATGCAAGATCTTGTTCTGTACAAAAGTCGGTGTGACAACAGGCTGAATGAAATCACAGAAAGGGCATCCTCTGATAAACGTGAGGTGGAATCATTAGCTAAGAAGTATGAAGAGAAATACAAGCAAGTGGCAGAGTTAGCTTCCAAACTGGCAGTTGAAGAACATGCCTTCCGTGATGTTCAGGAGAGGAAAGTTGAACTGCATGATGCATTAGTTAAAATGGTACAAGGTGGAAGTGTTGATGGTTTGCTTCAGGTTCGAGCTGATCGAATCCAATACCAATTAGAGGAGATGGAGAAAGCTTTTAGTGAACGGTGCAAGCACTTTGGACTGCAGTTCAAGCCATCTGCATCAGTTGAGCTTCCTTTTGGTTGGGAACCTGGGAAGCAAGAGGGGGCAATTGAGTGGGATGAAGACTGGGACAAATTTGAGGATGAAGGGTTTGGTTTTGTAAAGGACAATGGTACAATTGTTGAAAACCCAGTTGCTTCTGAAAATGTGAAAGTACCATCTCTCTGGAATGATATGGATGAGAGCCCTGTTGCATCTTCGAACGGTCACATCAAGGCTGAGAGACATTACAGAGCTGGTGATCATGCAGCTGAGAGTGACTTAGGGTATGATTTTGGTGAGGAATCTGTAAGGAGCCCCAGCAGTGCTGGAAGAAGTGCATCTGGAAGTCCATTTGTGTCTTCAAATTTTGCGATGCATGACTCATCTCCCAGCAAAAAGGAAACCTACAGTGACCATGGTGGTTCTGAATCCATTTTTGGTGACAAATATGCCGATGAAACCTCCTGGAACTTTGATGACCAAGACACTGAATCTGTTTGGGGATCTAATGCAATGAACAACGAGTCTGACCATCATGGAAGTGCACACAACTCTTTCTTTGGGTCAGATGACTTCGGTGTAAATCCTGTTAGGGTGGGCTCTCCAAGTGGTGCCAGTACCTATGGAAAGAAGAAAAGTTCATTCTTTGATGATTCTGTTCCAAGTTCACCTGCATACACATCTGGATTCTCACCAAAATTCAGTGAAAGCCGCGATGATAGCTCCTCATATAACTTTGGAAGGTTCGATTCCTTCAGATCCCAGGAGAGCGGATTCTTCCCTCAGGAAAGTCGTTTTTCCAGGTTTGACTCCATAAACAACTCCAAAGGTGAGAATGTAACTGGATTCGATTCACCGAAAAGCTCAACAAATTTCGGTCGGTTTGATTCTTTTGATGATGCCGATCCATTTGGTTCAAGTGGACCCTTTAAAGCATCAGGTAGCAGGTCTCCCCCCAAATTCTGA</cdnaseq>

Protein Sequence

<aaseq>MGAPAGWRGGNVGSVGGLPQATPGATAPQQATPGGFGLTLSSTMGMAPGQQAQGTPPSSMPPQSNSAVSAQDSKALVLSGNGSASGLGASNDIFSALTQPKSNVSTLSFPTSMAPNSSSFIVHTIWLPEPVESSSVWFSTRTAHKGPGAAGMPATGVRQPLPPHLQAQMDGANRPXQPRPHMPGMDNHAAPQANKDDGSGANSAVQEDAPKKVEVEKQVLDSREKLEYYRTKMQDLVLYKSRCDNRLNEITERASSDKREVESLAKKYEEKYKQVAELASKLAVEEHAFRDVQERKVELHDALVKMVQGGSVDGLLQVRADRIQYQLEEMEKAFSERCKHFGLQFKPSASVELPFGWEPGKQEGAIEWDEDWDKFEDEGFGFVKDNGTIVENPVASENVKVPSLWNDMDESPVASSNGHIKAERHYRAGDHAAESDLGYDFGEESVRSPSSAGRSASGSPFVSSNFAMHDSSPSKKETYSDHGGSESIFGDKYADETSWNFDDQDTESVWGSNAMNNESDHHGSAHNSFFGSDDFGVNPVRVGSPSGASTYGKKKSSFFDDSVPSSPAYTSGFSPKFSESRDDSSSYNFGRFDSFRSQESGFFPQESRFSRFDSINNSKGENVTGFDSPKSSTNFGRFDSFDDADPFGSSGPFKASGSRSPPKF</aaseq>

Gene Sequence

<dnaseqindica>1..422#1312..1525#3019..3090#3265..3336#3462..3560#3667..3738#3821..3935#4052..4120#4641..4944#5619..5730#5813..6256#ATGGGAGCACCTGCTGGTTGGCGAGGAGGCAATGTTGGTTCCGTTGGAGGTCTCCCGCAAGCTACTCCAGGAGCAACTGCTCCACAACAAGCAACACCGGGTGGATTTGGTCTTACATTGTCTAGTACAATGGGCATGGCTCCCGGACAACAGGCACAAGGAACGCCTCCTTCGTCAATGCCACCACAAAGCAACAGTGCTGTATCAGCTCAAGATTCGAAAGCTTTGGTGCTGTCTGGAAATGGCTCTGCCAGTGGCTTAGGAGCAAGCAATGACATCTTCTCTGCTCTTACTCAGCCTAAGTCGAATGTATCCACACTTTCATTTCCGACGAGCATGGCTCCTAATTCATCCAGTTTTATAGTCCACACCATCTGGCTCCCAGAACCTGTTGAATCTAGCTCAGTTTGGTTCTCAACAAGGTATTCCGACAGTGAGTTCTGGTGGCAGTCAACCTCAACAGACTCATCCCATCACAAAGCCGAGTGTTCCAGCACCAACTGTATCTGGTGTTTCTGCTGGAGTTTCTAATTCAGCTTCTCAATGGCCAAAAGTTACTCAGTCTGACATCCAGAAGTACACTAAAGTCTTTGCGGATGTTGATAGGGACAGAGATGGCAAAATAACTGGCGCGGAAGCTCGCACCCTGTTCCTCAGTTGGAGACTTCCAAGAGGTGGGATCTCATGACTAGCATTTAATTCTTCTAACTCCTAAGTATGCAAATGCTTGTTTCTGTCTGTAAGATACTCTAATTCCTTTCTTTTGTGAAGTTCTTGTACACATTTTCTGTTTTAGCTTATTGTTTTACGCTGATTTGTTATGTTTACTGGCATAATACTTGTGGTGTAGGTTATAATTTCGACTAATTCTATTTCTATGATAGTTTTCTTAAGATGCCAAACATATCCCCTTGGGGATGGAGTTCTGTTGCAAACGTCTAATGCAAGTGATGTTCTTCTATAATTTTCAGAGATTCTGAAGCAAGTGTGGGACCTGTCTGACCAAGATAATGATGGCATGCTTTCTTTGAGAGAGTTTGCATTGCTCTTTATTTGATGGAGAGGCACCGAGCTGGAACTCCTTTGCCTCCAGCACTTCCTGACTCTCTTAAATATGATGAGGTACTGCTGCGTGCAACAGGCTTGTCTTCAACAGCATACAACGGCCCGTCATGGCAACAAAATCAAGGTAAGTGATAATACTGGCTACCAGATTTCAATTATTATTTCATAACTTTGTCACAACATGATATCTTGTGTCTACCTCTCGTTGTGCTCTCTTCGCTCATAAGGTATTTTATGTTGGGCCAGGACTGCACACAAGGGTCCTGGAGCAGCTGGGATGCCTGCTACTGGTGTGCGGCAACCTTTGCCACCACATTTGCAGGCACAGATGGATGGTGCTAACAGACCANGGCAACCAAGACCTCACATGCCTGGTATGGATAACCATGCAGCACCTCAAGCAAATAAAGATGACGGAAGTGGAGCGAACTCAGCTGTGCAGGAGGATGCCCCTAAGAAGGTATTTGATCACTTCCTTAAATCCTGAACTGTCTGTACTGAAGCTGGTTGATCTAAATATCAGTCCTGATCCACTTTGAGCAGGCTAATTCTTCAATGGTAAACAGTGGGCTGATGCACATATATAATGGTTAAAGGACAGTCTTATTATTCATTCAATGCGAAGCGGAACTCGTATGATAGTGATCCAAATAATACTGTGCATGACGTAATGGAGCAATAGCTTTGTCGTAACGGATGGTAGGGTGTGTTCACACGAGGAATCGTGCAATTGTTGAAGAAAGAAGCAAGCAATCTTTACTCTTATGAAAGTGGTGATTGGGGGTTATGGTGTGTGCGACAGTCAATCCCCGACTTAGATATTTTGTGATTGCAAACATGTAGGCATATGCATACTGTCTCGAATGATTTTTACAAAGATCAATGCTTATATCCACACGAGTACACGCATATGGTTGATCGGTATCATGTAGTCACATATACAATAATTTAGATTACCCGGATAGTTACTTATTTATTTATTTATTTAATTAATTGCGTTTATGCACTCTGAAACATTATTATCTGCTGCGACACATGGGAAAGATGCTAGTTTAACCATAGTAGCTAAATCAAGAGGCAAATACCACATATGATACAGAGTTATGTATGAACTTTCTGTTGGTAGTTGTTTATGAAAGAGTAAAGTGCATGGGTGGTCCCTAAACTTGTGTGGGTGTGTCAACTAGGTCCCTGAACTCTCAACATGAATTTTTGGGTCCCTCAATTTGTCTCGGGTGTCATGTAGGTCCCAATGGGTTCCAACCCACTCCGTGTGCTGACGTGGGATGACATAGTGGCACCTACATGTCAGTGGAACCCATATGTCAGCCACAACAAGAAAAAATTAAGAACATATTTTTTTCTCCTCTCTTTTTTCATTTATTTTTTCAAAATTAAAAACATCCTTTTCTTCTCTCTCTCCTCTCTTTTTAAATTTATTTTTTTCTATATGACTGACATGTGGATCCACTGACACGTAAGTGTCACTGTGACATGCCACATCATCTCATGGAGCGGGTTGGAGCCCGTTTGGACCTATATGACACTCATGACAAGTTTGGGGACCCAAAAAATTCATTTTGATAGTTTAGGGACCTAGATGATACATCCGTACAAGTTTAAGGACCGCCTGTGCACTTCACTCCTTATGAAATTATTTCATCCCCCACTAATGTCTTTATGAAATTCTGACTTTGTGCCATACAAGTTTCCATTCCATGCATTATTAAGTTGACTGATATATGCTGATACTCTGTTTCTTGGCACTCATCGATTGCAAGTTCAGGATAGCTTTTTTCTCTTGATTAAGTGATATTATTATCTTTTTGTACCTTCCATCCCAACTTCCTATAAATGACAGTTAGAGCCGTAAGTATTGCTTAATATATGTTATATTTTGCTCTTTTACGAACTTTGAAACAAATTGTCTTTTGTCTCTTTTGCATTGTGAAGGTTGAGGTGGAGAAGCAAGTCCTAGATTCCAGAGAGAAACTAGAATACTACCGTACAAAGATGCAAGATCTTGTAAGCACACTTGTAATCTCTTACTAGTTTTCATGTGCAAAATGATTTGGTTAATTAAAGTAATTCTGGCTTGTACATGTGCTGATTTTTTAAATGAACATAACTAGGTTGCTGAAAATTGATTTATTAATGTGATTTAGTTATCATTCCTTTATTTGTTTTGTCTTGTCGAAGGTTCTGTACAAAAGTCGGTGTGACAACAGGCTGAATGAAATCACAGAAAGGGCATCCTCTGATAAACGTGAGGTACAGAACATGCTTATTACTTTATCCCCTTTTGGGGCCGTTTGATCTTGCTTTTAAATATTTGGAAGCATGTTAGGAATCATTAATTTGTAACACACTGATGGGCGATTTTTATTTTAATTCAGGTGGAATCATTAGCTAAGAAGTATGAAGAGAAATACAAGCAAGTGGCAGAGTTAGCTTCCAAACTGGCAGTTGAAGAACATGCCTTCCGTGATGTTCAGGTTGCTCTGCGCTGCACCGCATAAAATTACCACTTGAATTTTTTGCTGCAATCTTCTTATCTCTTGTCTCTCTGTGTTGAATCAAAGTTGGTTGGTTTTTGTTCAGGAGAGGAAAGTTGAACTGCATGATGCATTAGTTAAAATGGTACAAGGTGGAAGTGTTGATGGTTTGCTTCAGGTATGTTCTAACTTTGTTAGGTACTTAGGTGTTGTCACCTATCTCTCTTGAATAACACTGTGCACTGTTCCACTGTTCCTAGGTTCGAGCTGATCGAATCCAATACCAATTAGAGGAGATGGAGAAAGCTTTTAGTGAACGGTGCAAGCACTTTGGACTGCAGTTCAAGCCATCTGCATCAGTTGAGCTTCCTTTTGGTACTACACTATCCAACTCCTGGCATGTTATCAGTAGAACAAAATACTGCCCTAGTGCAATTTCACTTCCTGCATTCTTCAGATACATAATCTGCGAGTTTGTCCTTGTTTGTTAGGTTGGGAACCTGGGAAGCAAGAGGGGGCAATTGAGTGGGATGAAGACTGGGACAAATTTGAGGATGAAGGTAAAATAACGCTTTCATGCCATCCTGCCTGATATTGTTATTGCTTAAGAATACTTGAAATGAATTGATTTCCTATTATATTGAAGTTGAAAACTTTGTTTATTCAATCCAAACCAGTAAGTAATTCTTGAATGATTTAAATGTCTGCCATTTATCTTCTCTGAGTTGTTGCTAATGGCAGCTATTTTGCATCTTAAATAATAAAGCATGACTGTGTTTATGACTATTATATAGTGTGTGGTACAACTTTTAAATGTAAATTATGTAGATAAAATTTACTCGGTATTCTTATCATTCTGTTGATTACCCACTGCTCATATTTAGGATAGCAGGGCAATCTGTTCAGTAACAAATGTTTCTCACTAGAACATTGATGGTATGGCAGTAAACATGTTTGGTAGTAAAGATAACACACATCTCAATCACATTAGCTTCATTCGTTCAGATTTAGTGTCTTCTACTTGGTCAACCTAATTCTCTCTTTTTTCAGTTTATCTGACTAAATCATATATTTTAACAGGGTTTGGTTTTGTAAAGGACAATGGTACAATTGTTGAAAACCCAGTTGCTTCTGAAAATGTGAAAGTACCATCTCTCTGGAATGATATGGATGAGAGCCCTGTTGCATCTTCGAACGGTCACATCAAGGCTGAGAGACATTACAGAGCTGGTGATCATGCAGCTGAGAGTGACTTAGGGTATGATTTTGGTGAGGAATCTGTAAGGAGCCCCAGCAGTGCTGGAAGAAGTGCATCTGGAAGTCCATTTGTGTCTTCAAATTTTGCGATGCATGACTCATCTCCCAGCAAAAAGGAAACCTACAGGTACAAGTTTTCCCATTTTGGATAGTGCACAATTCTTATTCTATAATGTTTGACTTGCTACCTACATGATCACTAGAACTGAGATATGCCAGGCATAGTTTAATTGAACAGAATGGGCTGTATTTACAAATTTGAAACAAGTCAGCATGTTTCTCTGCAGTATAGTGCTGAGCCATCTGGTGCCACAACATGGGTCCACTTTCAGTATCCTATTCTAGTCCACTTGTAAATAGTTCATGTATTGCTCTGGCTATAAGCCTTCCATCTTGCGAGGCTGTGACAGGTTTTCTCCAATGGATGGAAGCTTAGGGTTTCCTTAGTTCCATATGTTCCTAGCATGACTGCATGAGTCAAGATTATCCATAGGGTTTCTTTAGCAGCAGTCGATCATGATGGGTAGCTGGATACCATGTCGTTCACACATTAAATTTTCTGTACACCAGATTCCCTCACCTTATTTTAACAAAAGAAAATATAGTAGGAATGCATGATATTCAGCATTGTTTCGTACTTCCTAGAAATGCGTCTCCACGGTCTTTACACTGTATGAGTGCATGTGCTGACCGTTTGTGGAAAAGATTCTGTAGAATGCTCAATTGTGATCATACCTTAGATAGTATTGAACCATGTAATTTTAAATTTTGTCTTGTCACTTATTGTTATTTCTGTCACAGTGACCATGGTGGTTCTGAATCCATTTTTGGTGACAAATATGCCGATGAAACCTCCTGGAACTTTGATGACCAAGACACTGAATCTGTTTGGGGATCTAATGCAATGAACAACGTGAGTTACATAGCTTCTTTCCAGTTGTGGTTTCTGAGCATGTCAACCCCTTTTCTGTTTCTTATGAGCTGCATTGATACAGGAGTCTGACCATCATGGAAGTGCACACAACTCTTTCTTTGGGTCAGATGACTTCGGTGTAAATCCTGTTAGGGTGGGCTCTCCAAGTGGTGCCAGTACCTATGGAAAGAAGAAAAGTTCATTCTTTGATGATTCTGTTCCAAGTTCACCTGCATACACATCTGGATTCTCACCAAAATTCAGTGAAAGCCGCGATGATAGCTCCTCATATAACTTTGGAAGGTTCGATTCCTTCAGATCCCAGGAGAGCGGATTCTTCCCTCAGGAAAGTCGTTTTTCCAGGTTTGACTCCATAAACAACTCCAAAGGTGAGAATGTAACTGGATTCGATTCACCGAAAAGCTCAACAAATTTCGGTCGGTTTGATTCTTTTGATGATGCCGATCCATTTGGTTCAAGTGGACCCTTTAAAGCATCAGGTAGCAGGTCTCCCCCCAAATTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011524

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011524&oldid=56347"