BGIOSGA011539

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Revision as of 09:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011539| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011539, complete gene.| tag = OJ1015F...")
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Gene Name

BGIOSGA011539

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011539, complete gene.

LocusTag

OJ1015F07.11

Ensembl Transcript ID

BGIOSGA011539-TA

Ensembl Protein ID

BGIOSGA011539-PA

Length

2354

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1755672..1758025

Sequence Coding Region

1757872..1758025,1757503..1757774),complement(1755672..1756346

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1755672..1758025 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1755672..1758025 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAATCATGCGTCCCTCCTGGGTTCAGGTTCCACCCCACCGACGAGGAGCTCGTCGGCTACTACCTCCGCAAGAAGGTCGCCTCCCAGAAGATCGACCTCGACGTCATCCGCGACATCGATCTCTACCGCATCGAACCCTGGGATCTCCAAGAACATTGTGGGATCGGGTACGATGAGCAAAGCGAGTGGTACTTCTTCAGCTACAAGGACAGGAAGTACCCGACGGGGACGAGGACGAACAGGGCGACAATGGCGGGGTTCTGGAAGGCGACGGGGAGGGACAAGGCGGTGCACGACAAGAGCAGGCTCATCGGCATGAGGAAGACACTCGTCTTCTATAAGGGCAGGGCGCCTAATGGCCAGAAGACCGACTGGATCATGCACGAGTACCGCCTCGAGACCGACGAGAACGCGCCGCCACAGGAAGAAGGATGGGTGGTGTGCCGAGCATTCAAGAAGAGGACGGCGTATCCGGCGAGGAGCATGGTGGAGACGTGGGACTACTCCTTGCACGAGCGCAACATCATGAGCGCCGCGGCGGCGGCGGCGTTCGCCGATCCGAGCGCTGCGTACGCGCAGATGAGGCGGCAGCACAGGAGCGGGCGGTTCAAGCAGGAGGCGGAGCTGGACGGCGCCGCCACAGCCCTCCTCCACTACTCCAGCCACCTCGCCGAGCTGCCGCAGCTCGAGAGCCCCTCCGCGGCTGCGGCGCCGCTCCAGCCCAACCCGAGCCAGCTGGCCACCGCCGGCGAGGACGACGACTGCAAGGGTGATAATGGCGGTAGGAGGGCCAAGAAAGCCCGCGCCGCCGGCGACAAGGTGGCGACGACCACGGACTGGAGAGCGCTCGACAAGTTCGTCGCGTCGCAGCTTAGCCCCGGGGAGTGTGGCAGCATGGAGGCAACGGCGGAAGCCGCGGCGGCGGCAGTCGCCGGTGTGAGCTCGCCGCTGGACCACGGCGATGACGACATGGCAGCATTGCTGTTTCTCAACAGCGACGAGAGAGACGAGGTCGACAGGTGGACGGGGTTGCTCGGCTCCGGCGCCGGCGCGAGCGGCGTCGACGGCGACCTCGGAATCTGTGTGTTTGACAAATGA</cdnaseq>

Protein Sequence

<aaseq>MESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQEHCGIGYDEQSEWYFFSYKDRKYPTGTRTNRATMAGFWKATGRDKAVHDKSRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETDENAPPQEEGWVVCRAFKKRTAYPARSMVETWDYSLHERNIMSAAAAAAFADPSAAYAQMRRQHRSGRFKQEAELDGAATALLHYSSHLAELPQLESPSAAAAPLQPNPSQLATAGEDDDCKGDNGGRRAKKARAAGDKVATTTDWRALDKFVASQLSPGECGSMEATAEAAAAAVAGVSSPLDHGDDDMAALLFLNSDERDEVDRWTGLLGSGAGASGVDGDLGICVFDK</aaseq>

Gene Sequence

<dnaseqindica>1..154#252..523#1680..2354#ATGGAATCATGCGTCCCTCCTGGGTTCAGGTTCCACCCCACCGACGAGGAGCTCGTCGGCTACTACCTCCGCAAGAAGGTCGCCTCCCAGAAGATCGACCTCGACGTCATCCGCGACATCGATCTCTACCGCATCGAACCCTGGGATCTCCAAGGTACAACTAGAGATCGTATGATTAATTTGAGTTTCAGAGATGATCATTGTGGCATTATTTATCCTAATTGTGTTGCCTGGTTTGTTGATTGATGAAGAACATTGTGGGATCGGGTACGATGAGCAAAGCGAGTGGTACTTCTTCAGCTACAAGGACAGGAAGTACCCGACGGGGACGAGGACGAACAGGGCGACAATGGCGGGGTTCTGGAAGGCGACGGGGAGGGACAAGGCGGTGCACGACAAGAGCAGGCTCATCGGCATGAGGAAGACACTCGTCTTCTATAAGGGCAGGGCGCCTAATGGCCAGAAGACCGACTGGATCATGCACGAGTACCGCCTCGAGACCGACGAGAACGCGCCGCCACAGGTATATACATATACCGATTTCACTAGCTAATTGGTTTCTTAATTTTCTCTGCATGCTAGCTAGCTCTACATAACTAGCAAACTAGTTCCATGTTTGATAGGCTAAGTTCCTAATTTTAAAAAGTTGTATATATCCGGTTAGATGTATAGGTTGGGATTATCAAAAAAAAAAGAAAATATTTTTTAAGGTTGTTAGTGACCACATTGCATACTTATATATCTGAGAAAATATATCTGAATTATATACTTATATATGTGTGTTGCAACTTGCAACTGAAGATAAAATGCAGTATACCAGCTTAGGCCTTATTAGAGGTTAAGGTCTAATGGTGCCCAGAGATTTCTAAAGTAGCACGCACAGAGATCTGCCGCCGATATACATGCGTGCAAGCATGTCTAATTCATGTACCACTAGTAATGGACCATATAGATAGGAATATATCAGTAGCACTAAGCAGCACCACAACTCTTTTTGTTCTTGAAAGATAAGTCTTGCATTGGCCTCCCTTTTTGTGAGCCTTCCAAAGTCTTCTATTCTCTCCCAAATAAAGGTAGCCTGCATCCAGTGTTGATGCCATCCTGACCTTACCACTAACACCAAAACCTTTTTCCCTAGACAATTGCATGCGCATGCATGGCCTAGTTAGGGTTTCCCCTGGTGTGAACGTCCTAACATGCGCCATATATTGTTTACAAGCTGTATGCAACTTGTGCTAGTACTCATCAAAACCATTGGATGCTGCTTGGCAAACATGTCACCACAAAACTAAAAAAGTTATCAGCTCGTATTGTTCCACTATCACACAGTGGGAAGCTAGCTAACTTTACGAATTATTGGCAAATACTTTGATGTCAATGTCAACCTTGCAAAATGCAGCTCACATCCCCCGTTCGTTTCCTCTTAAAACAATGGATTAAATTTTGAATTTTTATGCCACGCTTTTCAAACTGCTAAACTGTGTGTTTCGTATGAAAACTTTCTATATGAAAGTTGTTCTAAAATATCGGATTAATCTATTTTTCAAGTTTATAATAATTAAAACTTAATTAATTATACGATATTACCACAACGTTTTACATGAAATATTTAATCTTCATCTTCGGGAGACTCAAACACCACCTAAGTATCTAACTTTATTTGCATGTGTGTACTACAGGAAGAAGGATGGGTGGTGTGCCGAGCATTCAAGAAGAGGACGGCGTATCCGGCGAGGAGCATGGTGGAGACGTGGGACTACTCCTTGCACGAGCGCAACATCATGAGCGCCGCGGCGGCGGCGGCGTTCGCCGATCCGAGCGCTGCGTACGCGCAGATGAGGCGGCAGCACAGGAGCGGGCGGTTCAAGCAGGAGGCGGAGCTGGACGGCGCCGCCACAGCCCTCCTCCACTACTCCAGCCACCTCGCCGAGCTGCCGCAGCTCGAGAGCCCCTCCGCGGCTGCGGCGCCGCTCCAGCCCAACCCGAGCCAGCTGGCCACCGCCGGCGAGGACGACGACTGCAAGGGTGATAATGGCGGTAGGAGGGCCAAGAAAGCCCGCGCCGCCGGCGACAAGGTGGCGACGACCACGGACTGGAGAGCGCTCGACAAGTTCGTCGCGTCGCAGCTTAGCCCCGGGGAGTGTGGCAGCATGGAGGCAACGGCGGAAGCCGCGGCGGCGGCAGTCGCCGGTGTGAGCTCGCCGCTGGACCACGGCGATGACGACATGGCAGCATTGCTGTTTCTCAACAGCGACGAGAGAGACGAGGTCGACAGGTGGACGGGGTTGCTCGGCTCCGGCGCCGGCGCGAGCGGCGTCGACGGCGACCTCGGAATCTGTGTGTTTGACAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011539