BGIOSGA011606

From RiceWiki
Revision as of 09:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011606| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011606, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011606

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011606, complete gene.

LocusTag

OS03G0107000

Ensembl Transcript ID

BGIOSGA011606-TA

Ensembl Protein ID

BGIOSGA011606-PA

Length

5254

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:642692..647945

Sequence Coding Region

647747..647945,646527..646555),complement(646179..646403,645615..645806),complement(645433..645543
,645198..645273),complement(644826..644926,644591..644748),complement(644096..644217
,643789..643896),complement(643010..643130,642820..642892),complement(642692..642745

Genome Context

<gbrowseImage1> name=IndicaChromosome03:642692..647945 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:642692..647945 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTGCGGGATAGATAAGGACTCCACCGGCCGGGTTCCCCCATTTCGCTTCGCTTCCCCCAAACCGCAGGCGCACCCCCACCAACCAAAAAACCACAACCTCCCCCTCTCCTCTCCTCTCCTCGCCGCCGGCGCCGCCGCCGCCGCCGTCACCGCCGCCTTCTCCCTCTCCAGCATCTCCTTCTCTCCGCCACGAGAAAGTGAGTTGGCAGTAATAAAGCCAGAGGCGTTGAAGAGTTATATTTGGCTTCAGTGCTTTGATGGTTCCATACAACAAGTGGAGGAGGAGGTTGCCATGTTTTGCCCTATGATATGTCGAGAGATAGTAAAAAATGGAACAGGATCATCAAAAAATCATGCAATTGCTCTCCCAGAAAGAGTTAACCCTACAAGTTTGAGTTTGATTCTTGACTATTGTCGGTTTCATCAAGTCCCAGGGCGCTCAAACAAGGAGCGAAAATCATTTGATGAAAAGTTTGTCAGAATAGATACAGAAAGACTATGTGAGCTGACATCGGCGGCTGATAGTCTCCAATTAAAGCCATTGGTTGATCTTACCAGTCGAGCACTTGCTCGAATAATTGAAGGAAAGACACCTGAGGAAATTCGTGATATTTTCCATTTGCCAGATGACTTAACAGAGGAAGAGAAATTGGAACCCCTGAAAAATATAAATGATGATCCCAGGATCCGTTTGTTGAATCGATTATATGCAAAGAAGCGGAAAGAACTACAGGAGCGCCAGAAACTGAAGGATGTTCAAGTACAAGAAGAGCAAAAAGATGAGCGGTCACTGGATGAGATACTATGTTTTATAAATGGGGATGGAGGTTCTGGAGGTGGGAAAGCTTCTAAGAATAAGAAAAAGAACAAGAGAAGAAAGGACCATTCTAAGAACCCCCCAAAAGCTAATCCTGAACCTGTAAACAAGGAGGAAGCTACTCGTGGAGTTCCATTCAATGTGGGTACTGGTAATATTTCTAGAACACCTTGCCAAAGCTCAGATGTGCAAGATGATGTTGAGTACCCCTTTGAAGATGCTGACCTTGATGATGGACTTGATCCTGCAATGCAGGAAGAGCTTGACAGAGAAGTGGAGGACTTCGCAAGGAGGTTGAATTCTGTTTGGCCTGAAAGAATGCATTTAGGCCAAGAAAGAAGGATTGAGTCACATATGATTGGTGGCAATGGTTCTCTGCAAAGATTTTCTGGTGAGAAGGTTAAGCGCCAGGATCAACAAGCAGAAGCACAGGAAATTTGTGCACATGCAGCTTGGAAGAGAGCTAGAGACCACCGAACAGGGCCACCTGTTTACTTGAGTTACTTTGCGCGAAAATTCATCTCACTCGAGGGAATGGACTTTGAGTCGCAATCTTTCGGGGGCCTCTCCAACCATCCTGAGAGGCGACCCCAAACCCAAAGGCCAAATCAATCTCTCGTTTCGAACAAGATGTGGGCGTCCATCTTCCTCGTCCGGCTCATCGACGCAAAAGTAGGCGGAGGCAGCATTTTATGTTTCTCCCTTGAAAATTTTTACCACGTGTGGGGCCCACTCTGCCCCTGGTAG</cdnaseq>

Protein Sequence

<aaseq>MGCGIDKDSTGRVPPFRFASPKPQAHPHQPKNHNLPLSSPLLAAGAAAAAVTAAFSLSSISFSPPRESELAVIKPEALKSYIWLQCFDGSIQQVEEEVAMFCPMICREIVKNGTGSSKNHAIALPERVNPTSLSLILDYCRFHQVPGRSNKERKSFDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRDIFHLPDDLTEEEKLEPLKNINDDPRIRLLNRLYAKKRKELQERQKLKDVQVQEEQKDERSLDEILCFINGDGGSGGGKASKNKKKNKRRKDHSKNPPKANPEPVNKEEATRGVPFNVGTGNISRTPCQSSDVQDDVEYPFEDADLDDGLDPAMQEELDREVEDFARRLNSVWPERMHLGQERRIESHMIGGNGSLQRFSGEKVKRQDQQAEAQEICAHAAWKRARDHRTGPPVYLSYFARKFISLEGMDFESQSFGGLSNHPERRPQTQRPNQSLVSNKMWASIFLVRLIDAKVGGGSILCFSLENFYHVWGPLCPW</aaseq>

Gene Sequence

<dnaseqindica>1..199#1391..1419#1543..1767#2140..2331#2403..2513#2673..2748#3020..3120#3198..3355#3729..3850#4050..4157#4816..4936#5054..5126#5201..5254#ATGGGTTGCGGGATAGATAAGGACTCCACCGGCCGGGTTCCCCCATTTCGCTTCGCTTCCCCCAAACCGCAGGCGCACCCCCACCAACCAAAAAACCACAACCTCCCCCTCTCCTCTCCTCTCCTCGCCGCCGGCGCCGCCGCCGCCGCCGTCACCGCCGCCTTCTCCCTCTCCAGCATCTCCTTCTCTCCGCCACGAGGTACGCCCCCGCCCCCGCGCCCGCGCCCAATCCTTTCCTTCGTTTGCGTTCGTGCGTAGGGTCGGTTCCCGGGTTAGGGTTTTGGCCGGGGCGACAGCCGACACCGTCGCCGTCGAGTGGGCTTCGTGGATTGCTTGCTTTTGCGACACGCCTTCCGTTTGCCTCCCTCCGCGGCGCCAATCCTCGTTTAGGGTTTAACCCCATTTCGCTGCTCCGGTGGTTGCGATTCACGTCTTTCTTACCTTGTCTCTTGCCGGGGAATGGATAAGTTTCTTGCCGTAGCCGCGGCCTTGTTAGGTTGTATAGCTATGTGTTTTACGAGGACCAAATGGAGGCCATTTTTTGCCGATTAGACAGGGGGAACGTGTCGCCGGATGCAAATTGCTGTATCTTTGATTACCTAGTTTCCATTTCATTGCTTTGATTACACATGCATATCTGATTTCATATTTGGTTGCTGGATGCCCATGCATGTTCGGTACCAGGATTAAGTGCATAGACTAGTGCCTTCTCCTCTGCATTTATGAGGATTAATTCTTTCAATGAACTCAACCTGTGGACCTCAAATATGGATCAGTTAGTCATACCGCCAAATGGTACCCAGCGTGAATCTGTTTGTACCTATTGGGTCGAGGTGTCTATGTAGTGTAACCAGAATTAACCTAGGAACCTATCAGTACTTTTGAAAGGGCAATAGTGAGCTTTACGTCATTTGGTGATGCCATTTAGTTGCTACTACCTTGAGAGTACAACTGTAGAAAGGCTGCATATTTTATTTCTCTATTTGAAGCTGGATGCTCTATCTTTCTTCTTTTTTTTTTTTAAAAAAAGTTTTGCTTCATGTGTCATATTGCATTTCTATGTGACTGACTATTTACCCCTTGTGTACTCCAAAATGCCATAACTTATGCATCTCGGGTTTCTCTCTGTACTGTAGGCTAAACAAGATCATTCATTCCATTAGTCATAAATAAAGACCATTGTTGAATCAAAAGAGAAATAAGGTCACTATCCAATTGAAGACCAAAAACAGGGTACTGTGATTTGTTGTACAGGATAAAAGTTTGTCGACATAATTTCCGGCCATTGGAGTACTGGCAGGTGTTATACCCCGAAAGGAGTTTCTTGTAAATTTTCTGGTGTATTGTATTGGCGGCTTTGTTGTTTCTCTGGTATTGTCAATAATGTCAGAAAGTGAGTTGGCAGTAATAAAGCCAGAGGTATGACCCCTATGCATTTCTAGATCATAACTATTTTTTCTGTTTATTGGAGGGGAAACAATTGTTCTCCAGCCTTATCAGCTATTCATTTGGTTCCAATTTAATTTCATTGTGAACTCACAGGCGTTGAAGAGTTATATTTGGCTTCAGTGCTTTGATGGTTCCATACAACAAGTGGAGGAGGAGGTTGCCATGTTTTGCCCTATGATATGTCGAGAGATAGTAAAAAATGGAACAGGATCATCAAAAAATCATGCAATTGCTCTCCCAGAAAGAGTTAACCCTACAAGTTTGAGTTTGATTCTTGACTATTGTCGGTTTCATCAAGTCCCAGGGCGCTCAAACAAGGTATGTTGTGATTTAAGTTTTGTCTTCTGGCAACTCCCTTTTTACTGCTTTCTCTCTTCTGCTTGTTTCAGGCGTCCACCTGTTGCAAGTATAGACCATTATGTAATTTTGCTTCCTGTAACAGCCATGTTATTCCCGTAGTTGTTTTGTTACAAGTAATAGTCTCAAGGGTAATTCTGCTTCTTTTAATACTCCTATTTTTATCGATAAGGATCATGGCATGATTCAGCTTATGAACTTCGGGAAACTTTCTGGAGAGGATGCTAATTCTTTTAGCCACTTAGGCATTTACTTTATGTTATAAGAGGAAATAATCATTTGATGAATTTACATTTCTCCAGTTATCATATCATGGTCACATTTATTGTGCAGGAGCGAAAATCATTTGATGAAAAGTTTGTCAGAATAGATACAGAAAGACTATGTGAGCTGACATCGGCGGCTGATAGTCTCCAATTAAAGCCATTGGTTGATCTTACCAGTCGAGCACTTGCTCGAATAATTGAAGGAAAGACACCTGAGGAAATTCGTGATATTTTCCATTTGCCAGATGACTTAACAGAGGTACAAATCGCATGTCTGCTTATAGTTATCAGCATGTATTGATGCTTACTGTGGAACTTGCATTCATTCAGGAAGAGAAATTGGAACCCCTGAAAAATATAAATGATGATCCCAGGATCCGTTTGTTGAATCGATTATATGCAAAGAAGCGGAAAGAACTACAGGAGCGCCAGAAACTGAAGGTAAATATGATAAAATCCAAACTGTTGTATTATCATCAGAGTATGCTTTCTGATATTAGGCCTGTAGGCCATGTGAAATGATATTTATCCTGTCCATTCAGCAGTGTAGTTCATGTTTGAATGTCATGTATTAAGAATCTTATGCTAATTTTGTTTCAGGATGTTCAAGTACAAGAAGAGCAAAAAGATGAGCGGTCACTGGATGAGATACTATGTTTTATAAATGGGGATGGAGGTATAATTACAGTGAGTTATATTGACTATATAACTTCGTTGTTTCCCTTGTCTCATTCAACCATGATTATCCTGTTCTGCTGAATAACGCTGAGCAATCAGTAAACTACTAAGAAGTTGTCATCCAGGGTCAAATTCTATAGTCAATTTTAACTAATCTGGTTACAATATTTAGGCAAAGATGCAAATATGCAACCAAAGAGCTTGCTCAAAGAGTATTTCTATATAGAAAAAACTTAGCAATTTCATATAAAGGTTTATCCATTTTATAGGTTCTGGAGGTGGGAAAGCTTCTAAGAATAAGAAAAAGAACAAGAGAAGAAAGGACCATTCTAAGAACCCCCCAAAAGCTAATCCTGAACCTGTAAACAAGGTTAGGTGTCCTCACTGTTTTTTGTTGAGTAGTTGTGTGGAGAACAGTCAAGTTCTTACTTATCTGTTGACTTATAGGAGGAAGCTACTCGTGGAGTTCCATTCAATGTGGGTACTGGTAATATTTCTAGAACACCTTGCCAAAGCTCAGATGTGCAAGATGATGTTGAGTACCCCTTTGAAGATGCTGACCTTGATGATGGACTTGATCCTGCAATGCAGGAAGAGCTTGACAGGTGAGGATATGACATCTCAAGCATACAGTTCTGTTTTTTCTGCGCCGTTCTTTTCTTTCCAATGCATCAAAACTCTATAGCGCCCTATTTTGCATATGCTATTATGCTTTAGCAAATTACATGTTTTGCCCCTAAAAACAATTCTTCTTAGTATTTGTGCTGATATATAAGTTGGTTAGTTCAAAATTCACAGCTGAAAAACAGCATGATATAATTCAGTTGCTTCTGGTCAAGTTCATAGAAGTTTTGCTTAATAATCGCAGTTGCATCTGGTCAAGTTCATTGCTCTCCTAAGCCTGTTGAGAAAGTTGCAGAGAGCATTCAACATCATTTACTACTGACATACCTGACAAGTTTTACTTTTAACATGCAGAGAAGTGGAGGACTTCGCAAGGAGGTTGAATTCTGTTTGGCCTGAAAGAATGCATTTAGGCCAAGAAAGAAGGATTGAGTCACATATGATTGGTGGCAATGGTTCTCTGCAAAGATTTTCTGGTAATTACTTCTATATTTTGAAGAAATTTTGTATTCCCCAGTCCAAGTGTCAAAGAATATGATCTTCTGTCTTTAGGCAAGCATCAAAGATGCACGATAGTGGTTCTGCGCAGTTTTTTTTTTTTGGGCGTAAGCACTCTTGTTTAGCCATACTTATCTTGTTTAATCGTACTTGCATTTATGCAGGGTTCAATCACAGGTGAGAAGGTTAAGCGCCAGGATCAACAAGCAGAAGCACAGGAAATTTGTGCACATGCAGCTTGGAAGAGAGCTAGAGACCACCGAACAGGGCCACCTGTTTACTTGAGTAAGTGCTCGCCGAAAAAGCCTCGGCGCCCAGCTTGCAGACGATGTAGATTTGTTTGCCTTGGCCATTTTCGGTGAAGGGGGGGGGGGGGGGGGGGCGATGATGAGGTATAGATCAAGGAACAGTGAAGTAAGTTTGTTATTTCATTGGAGCGTTGGAGGTCTGTTGACTCGGGTTTTTTCTTTGCTGTGTTGCCAATTTTCCTGAATAGAGCGAGTGTGTTAATGATAGTTGCAACTGACTGTAACAGATGATGATATGAGCTGTTGTGAAAGAAATTCCGTTGATCAATTGTATGTCTGATGTAAACTGAGCTTATATGCGATTCGCTCCTCTTGTGAAGATGGAGGCCATCACGTCACGTGCGAGGGATAGGAGGATTACCTAACCTAGCTAGTACCTGCCATCAACGTCAAGGACAGGGCCGAAAAGATTCTGGCCGCTGGGCCAAGAAGTAGCATCTTCTCAAGCTCAACATGGAGATGGAAATGGAGTAGGGTATTTACAAAGATGAAGCATTCAATGGGTGAAGGCAGGCATGCCAAAGGTACGTACGTTAACGTACTTGTTGATGGACCAGACCAGAGCAAAGGGAGCATTCATGTCTAGCAATGAGGTGAGATTTCAGTTGATGCAACCACCAATAACTTCCATCCAGGTTACTTTGCGCGAAAATTCATCTCACTCGAGGGAATGGACTTTGAGTCGCAATCTTTCGGGGGCCTCTCCAACCATCCTGAGAGGCGACCCCAAACCCAAAGGCCAAATCAATCTCTCGTGTGAGTTGTGACCTCCTTTCCCTTTCCTTTCGTCTCTGGCAGCCGGCAAAGGGTCTATCCCATATTCAGGTTCATCTCGTTATTGTTCCTTTTTTCCCCTCTTTCTTTCTTGTGTAGTTCGAACAAGATGTGGGCGTCCATCTTCCTCGTCCGGCTCATCGACGCAAAAGTAGGCGGAGGCAGCATTTTAGTAAGACTAGGGCTGAACCATATAGCTATCAATTTTTTTTGTGCAAATTCTACGTAAATTTCAATATATTTCAGTGTTTCTCCCTTGAAAATTTTTACCACGTGTGGGGCCCACTCTGCCCCTGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011606

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011606&oldid=56429"