BGIOSGA011632

From RiceWiki
Revision as of 09:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011632| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011632, complete gene.| tag = OsI_096...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011632

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011632, complete gene.

LocusTag

OsI_09603

Ensembl Transcript ID

BGIOSGA011632-TA

Ensembl Protein ID

BGIOSGA011632-PA

Length

3088

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:276901..279988

Sequence Coding Region

279781..279988,279559..279686),complement(279395..279466,279137..279282),complement(278937..279051
,278216..278353),complement(277189..277276,276901..277025

Genome Context

<gbrowseImage1> name=IndicaChromosome03:276901..279988 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:276901..279988 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGATGCCGTCGCGGGCGCGGCGCAGGTCCAAATCCCGGTGGCCTCTCGGCGAGCCCCCTCCCGGCCTCTTCCCCGCTAGGGACGACCTCCTCCGCCTGCTCGCCGTCGTCTCCATCGCCGCCGCAGCAGCCGCTGCCTGCAGCCTTCTCAACCGCCGCCCCAAACCCTTGTGCGACAGCGGCGGCGCCGCCTATACCCACCATGATTCATGCCAACCATGCCCTCCCCATGGACGATGCGTAGACGGAAACCTGGAGTGCGTCCAGGGATTCAACAAATATGGCAACCTGTGCATAGAGGATGGGCTGGTCAGCCAAACTGCTACCAAGATTTCACAGTTGCTAGAGCGGAGGATCTGCGATCAATATGCCCGTGCTTTATGTGGCCAACCTGCCAAAATCTTGTTCCAAGAGCTCGATATCTTAAACATGGCTGATGAGCTGTTATCCAAGGGTTTTGTTGGCCTAAGTCAGGATGGAGCTAAGGTTGCAAAAATTAAGGTTCTGGACAGTGCGCGGGCCTTCTTTGAGAAAACATTCAGCTCCGACGGAGTCGAAGAGTTTAAATGTCCAGACCTGGTTGCCGAGCTTTATAGGCCCCTGACCTGTCAAATTCGGCAATGGATCTCAAGAAATATCATGTCTGTGACAGCCTTTGGTGTCCTGGTGTGTGAGGTCCTTGAAGATAATGCCATAGATGCAAAGATTGGCAACTCTGAATGTGAGCCTTGGGTGGTCACGTCTTGGCTGCGAGATCATCTGCTAGTCCCACAAGAGAGAAGGAATGCTTTCCTTTGGAAGAAGGTGGAAGAACTAATACTGGAAGATTCTCGCATAGATCAATACCCGAAAGTGGTCAAGGGAGAGTCGAAAGTTGTTTATGAGTGGCAAGCGAGCGGCTCGCTCAGTGGAAAGAAAAAGGTTAAGAAGATGCAAGGTGTAGCAGCAGGCAAGTCAAGAGCCGATGGTGCAGCTGGCGGCGCCATAAAACTTGCTGAAGAACTGGATGCAGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MPMPSRARRRSKSRWPLGEPPPGLFPARDDLLRLLAVVSIAAAAAAACSLLNRRPKPLCDSGGAAYTHHDSCQPCPPHGRCVDGNLECVQGFNKYGNLCIEDGLVSQTATKISQLLERRICDQYARALCGQPAKILFQELDILNMADELLSKGFVGLSQDGAKVAKIKVLDSARAFFEKTFSSDGVEEFKCPDLVAELYRPLTCQIRQWISRNIMSVTAFGVLVCEVLEDNAIDAKIGNSECEPWVVTSWLRDHLLVPQERRNAFLWKKVEELILEDSRIDQYPKVVKGESKVVYEWQASGSLSGKKKVKKMQGVAAGKSRADGAAGGAIKLAEELDAG</aaseq>

Gene Sequence

<dnaseqindica>1..208#303..430#523..594#707..852#938..1052#1636..1773#2713..2800#2964..3088#ATGCCGATGCCGTCGCGGGCGCGGCGCAGGTCCAAATCCCGGTGGCCTCTCGGCGAGCCCCCTCCCGGCCTCTTCCCCGCTAGGGACGACCTCCTCCGCCTGCTCGCCGTCGTCTCCATCGCCGCCGCAGCAGCCGCTGCCTGCAGCCTTCTCAACCGCCGCCCCAAACCCTTGTGCGACAGCGGCGGCGCCGCCTATACCCACCATGGTGACTCACTCACTCACTGCTTTCTCGATCTCTCGCGCGTATTCCGTTTCTTTTCCTTTGGCTAGCTGTAGCTGATTATACTAATAATACGCAGATTCATGCCAACCATGCCCTCCCCATGGACGATGCGTAGACGGAAACCTGGAGTGCGTCCAGGGATTCAACAAATATGGCAACCTGTGCATAGAGGATGGGCTGGTCAGCCAAACTGCTACCAAGATTGTACTGCCCCTTTGCTTGCTCTCTTGTTCCTTTCCCTCTCATTTTGCTATGCATACCTTCCTTTTACTGCTTCTCCACATATCTCTATATAGTCACAGTTGCTAGAGCGGAGGATCTGCGATCAATATGCCCGTGCTTTATGTGGCCAACCTGCCAAAATCTTGGTCTGTTTTCGTTTTACTGCTCCCCATCCTCATCTTCTTCATTACGACTATGTCCCCCCCCCCCTGCTTTCCATGCCCTCATCCTCGTGTACTTCTGTTGCCTCGCTTTCAGTTCCAAGAGCTCGATATCTTAAACATGGCTGATGAGCTGTTATCCAAGGGTTTTGTTGGCCTAAGTCAGGATGGAGCTAAGGTTGCAAAAATTAAGGTTCTGGACAGTGCGCGGGCCTTCTTTGAGAAAACATTCAGCTCCGACGGGTATGCTTCACCACTACTTCTCCCCCTATCTCTGACTATATGTACGCTCTCTTTACGTATGTGCTGTTTCCCCTTTCTTGTTTAGAGTCGAAGAGTTTAAATGTCCAGACCTGGTTGCCGAGCTTTATAGGCCCCTGACCTGTCAAATTCGGCAATGGATCTCAAGAAATATCATGTCTGTGACAGCCTTTGGTGTCCTGGTACGTCTATAGCATTACCATCTTAGTCATGCAGTTTGCTTAAAGGCAGTTCAATTGATTATTGTACCCAAGTTTTCAGCACTGCTCTGGATTCTTTGGACTATTTACAAGAGACAAGCATTATCAAAGAGGGCCGAACAAATATATGCTCAGGTATGAAATTCCTCTCTCTCTCTCTCTCTCTCACTCACACACACACACACACACAATTCTTCCAGTTCTTTATCCCATGACGAAGGGTTATTTGCTGCTAATTTGCATAAAACGACGAAGTCTGATTAACCGTATAGTAAACGTTGTTCTTGCTGTAAGCTATAGCTGTTATTGTTTTTTGTTGGCAAAATTTGATTGGAGTTACTGCAGTACTAGCATTCACTTTTCTGGCGCAATTCACTAGTACGTCAGCAGTTCCACCATCTCTTTCACCTTTTCCAAGCATGAGGGAGGTGGTGGCTGTGGGGAAAGGTGGATACTTTCCTTTGTCCAAAAAACAGTAGTAAATCATTTGTTTGTTGCATTTTAATTTTTCCATAACTTCTTTGGACCTTCTTGTATTTGTCTTTTGCCTGTTCTCATACAATAGGTGTGTGAGGTCCTTGAAGATAATGCCATAGATGCAAAGATTGGCAACTCTGAATGTGAGCCTTGGGTGGTCACGTCTTGGCTGCGAGATCATCTGCTAGTCCCACAAGAGAGAAGGAATGCTTTCCTTTGGAAGAAGGTAATTACTTTGCAGTATATTCCACTCAATACATAGATTTTGACCTGTATTGATTAGCATTACCCAAATTCGAATTCTTAAAGGAAAGTTCCATGGAGCTACAATTTTTCTGTACATGTTTTATATTAGTAGATGAAAGTACGTCATATTTTCGAGCATCTGAAGCAATAATTCAAACATTTAAAATGTTTAGAAGCAACGTTTAAACAATGGGGCACAATAAAATTCAATAAATTTGGTTTCTTTGGATAACCGATTAGGTTACTGTGTAGTATTTGAGAAGACACTTGTACGCGTTACATTTTATTTTTTGATGGCGACAAGTTAAATTTCACATTTTTAGTCCTAGGTGTTCATCATTACCTACACAGCTTTTTCTTCGGTTGCTCCCATGGTATTTTGTTCTTTGACCACCGTCGCTGTTGGTTCAGTACACGTAATTTTCAGTTAAAAATGCTGTTGAGGGAATGGCTCAAGCAGCGCAACGTTGCAGCTTTATTTCTGAGTAGAAAGTTGACATGAGTCTCATCTTGTAACTTGTCAAAATTGACTACTAAAAGGAAGCGTTGAGTGGGCATTAATCTTCTCATGATCATGTTTGCATTGAAAGATTAGTGTCTAGTACTAGTTTCTTGATGATGTGGAGTTTATGAAAACTATCCCTAGTGTCTTGGGTTGGAACTGGCCTTATATGGCACTAGAAGTATCTTGGGAAAAGGAGAAACACACTGCCCCTAATTTATTGACAAGTGCATTGTCCTAGGCTCAATATATGTACTAGTATATGGGCATAATAGAGAAGTAAAAAAATTGCCTCAGCAAGTCGTAGCCTCATTGGTCTAACCTTGTAATTTATATAGCTCTGCTGCTGAAAATTTGTCATTTCACTCTCCATTGTTGGTAAACTAATTTCCCTTTCTCTGTTGTATTGTGGCATAGGTGGAAGAACTAATACTGGAAGATTCTCGCATAGATCAATACCCGAAAGTGGTCAAGGGAGAGTCGAAAGTTGTTTATGAGTGGCAAGGTACAAACATGGCTCCTGCTTTATTAGTTCCACCAACTAATAAAGCAGAGAAGTATTGACCTGTTTGACAGATAATGTGGTGCTATTTTTATTTCGTCGAGTATGCTATCTTATTAGATGTTGTTTAGTGGTTATATACTTATATTGGTGTGTTTGCTTGCAGCGAGCGGCTCGCTCAGTGGAAAGAAAAAGGTTAAGAAGATGCAAGGTGTAGCAGCAGGCAAGTCAAGAGCCGATGGTGCAGCTGGCGGCGCCATAAAACTTGCTGAAGAACTGGATGCAGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011632