BGIOSGA011735

From RiceWiki
Revision as of 09:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011735| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011735, complete gene.| tag = OsI_097...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011735

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011735, complete gene.

LocusTag

OsI_09764

Ensembl Transcript ID

BGIOSGA011735-TA

Ensembl Protein ID

BGIOSGA011735-PA

Length

3018

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1323188..1326205

Sequence Coding Region

1323188..1323439,1323522..1323624,1323978..1323991,1324173..1324385,1324474..1324545
,1324885..1324974,1325076..1325114,1325217..1325321,1325580..1325745
,1325905..1326014,1326119..1326205

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1323188..1326205 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1323188..1326205 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTATAAGTGTAGTAGCTGCCTGCAGGCGGTGGTGCTGTCGCAGTTGCTCCTGCCGTGGACGCACATTGCGGTGGCGGCTGGCGCGAAGAGCTCGTCGCCGGCGGGGAAGCCGAAGGCCGCGGCGCCGCCGGTGGTGGCCGGGCCGGTGTCCAAGGTGGAGGACGCCACCAGGTTCCAGATATACTACGGCCAGAGCTTCAAAGTCGTCAAGAACAACTGGAACGGCAAGAGCTACCTTCTAATGCAGAACACATCCAAGATGGCCACCAAGACCAAGTATTGCACGGGGAGGATTAAGTCGTTCGTTATCCCTCTTGCCAATTACTCCGTCGACACCACGGCTTCTCCAGTGTCATTCTTCGAGCTACTTGGAGTATTACAAAACTTGAAGGGGATAACATCTGATCAAATTGCCTCCCAGTGTGTGCTCCAATCATATGCAAGTGGAAATGTCCAGCTTTTTAACAAGACCGATGCACAGATGCTCACACAATTTAGTGCACATTTCTTGAGCACTACAGATGAAGGCTGCAATTTCGCAGCTTATGTACCCTCTGAAGAGGGGACACCATTGCAAAGGGCTGAGTGGATCAAGTACTTGGGAGCTTTCACAAATTCAGAAGATAGGGCTAACACAGTTTATGACGCAATAAAGGCAAACTACTTATGCTTAAGCAAAGCAGCTGCGAATCTTAGCACAACATTCAAACCTATAGTGGCATGGATTGAATTCACACAGGGTATGTGGACATTTGTTAGTGATGGTTGGATTGTACAGTATGTCACAGATGCAGGAGCAGAGGTTGTTGATGCAACTATTACTAATAGGAGATTCAACAATTCTGATCCAGAGGATATGGATAACTTCCATGCTATTCTTTGTACAGTTGATGTGGTCATAGATCAGACATATGCTTCAGATCCTGCAGAGTACAAACTATCCACATTCTTGGAGAGCATTAATGTGGACCGTGACTCTTGTTTTAGTTTTGTAGCCAACCGTAGCATATGGAGATTTGATAAAAGAATAGGATATTCGAAGAAACTTGATTGGTTCGATGGAGCTATCTCCCAGCCCCAGTTGGTTCTTGCTGATCTAATAGAAATTTTCTTTCCAACGGGGAATTACACAACAATTTACTTCAGGAATCTAATGAAGGATGAAGGGGTCACTGAAGTTGTCCCCGAAATGTGTAGTAGAAGCATATCAACACCCATGGAGCCAACAATCTTGCCCTGCCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MGYKCSSCLQAVVLSQLLLPWTHIAVAAGAKSSSPAGKPKAAAPPVVAGPVSKVEDATRFQIYYGQSFKVVKNNWNGKSYLLMQNTSKMATKTKYCTGRIKSFVIPLANYSVDTTASPVSFFELLGVLQNLKGITSDQIASQCVLQSYASGNVQLFNKTDAQMLTQFSAHFLSTTDEGCNFAAYVPSEEGTPLQRAEWIKYLGAFTNSEDRANTVYDAIKANYLCLSKAAANLSTTFKPIVAWIEFTQGMWTFVSDGWIVQYVTDAGAEVVDATITNRRFNNSDPEDMDNFHAILCTVDVVIDQTYASDPAEYKLSTFLESINVDRDSCFSFVANRSIWRFDKRIGYSKKLDWFDGAISQPQLVLADLIEIFFPTGNYTTIYFRNLMKDEGVTEVVPEMCSRSISTPMEPTILPCQ</aaseq>

Gene Sequence

<dnaseqindica>1..252#335..437#791..804#986..1198#1287..1358#1698..1787#1889..1927#2030..2134#2393..2558#2718..2827#2932..3018#ATGGGTTATAAGTGTAGTAGCTGCCTGCAGGCGGTGGTGCTGTCGCAGTTGCTCCTGCCGTGGACGCACATTGCGGTGGCGGCTGGCGCGAAGAGCTCGTCGCCGGCGGGGAAGCCGAAGGCCGCGGCGCCGCCGGTGGTGGCCGGGCCGGTGTCCAAGGTGGAGGACGCCACCAGGTTCCAGATATACTACGGCCAGAGCTTCAAAGTCGTCAAGAACAACTGGAACGGCAAGAGCTACCTTCTAATGCAGGTAGGTACAGTACGCATTGCTCTTGCACAAAAATTGGCACATAAACCTCTGCTGATTTTTTGGGATTTGGTGAGCTGCGTAGAACACATCCAAGATGGCCACCAAGACCAAGTATTGCACGGGGAGGATTAAGTCGTTCGTTATCCCTCTTGCCAATTACTCCGTCGACACCACGGCTTCTCCAGGTAGAAATCAAGCACACCCTGGATTATGTATGCATTTATGCTTGCACTGAAGTTTAATCCACTGTTATATAGTTGTTATGTTAACCATTCGATATTAATATGTGTACAAAGTATGATCTAGCAAAGACTGCATTTCAATTCAAACGGTCTCTGTTCGGAGTGGCGCCATAGCTTGCAACAGTTACATAATGCAAACTGACACACTGAAAGCAGCACATACGAAACTTCAATTCGATATTTTTCGTTCAAATCTTCAATTTGTTTCATAGCAAGTACTTAAGAGTTGCTTTTTCTTTTTTGTACACAATATAGGAAACTGATCAGATTACTGTTCTTTCCTGTTTCATCTGCAGTGTCATTCTTCGAGGTGAGCAATGCGGGACAAATTAAGTACTGTTCAATGCGGAATCTGTACAATCGTAGATAATGAAGCAAAAGCAACAGCTGAAACTGAACAGGAAAAACATATCATCTGTAGAAGCAAATGTTTTATGCCTCTGACTCTCATATTAATTGATCCCTGCAGCACTTTTTGACACTCTATGCAGCTACTTGGAGTATTACAAAACTTGAAGGGGATAACATCTGATCAAATTGCCTCCCAGTGTGTGCTCCAATCATATGCAAGTGGAAATGTCCAGCTTTTTAACAAGACCGATGCACAGATGCTCACACAATTTAGTGCACATTTCTTGAGCACTACAGATGAAGGCTGCAATTTCGCAGCTTATGTACCCTCTGAAGAGGGGACACCATTGCAAGTAAACAATGATTATTTTTTTAATGCTCCATTTGAAATATTACAGCATTCAAACACACTAATATTGTGTCTCAAACGTCTATGTCCAGAGGGCTGAGTGGATCAAGTACTTGGGAGCTTTCACAAATTCAGAAGATAGGGCTAACACAGTTTATGACGCAGTTAAGACCAGCAAATTTAACTTTATTTGCATTGATATGACCATGCAAGAACTTTGTCATTTATGCGCTCATAATGCATTTACTATAGTACCACTTTAAAGTAACTGTAGTTTGTAATTTGCTTTTTGTTGTAAAGGCGGTGTTCTAACGCACTGCATTTGTACAGTTTTCCCCTTTTCCTTAATATACATCGGTCGGCATTCTTCGCCGTCCCGGCGAAAAAAAAAGTAACTGTAGTTTCATTAGCACAAAGAAACTAGTTTAAGACCACTTTAGTTTGCAATGTCCAATCAAGTACCTATAGACAATTGATCTCATTTATCTAGCATGTCAATGCAGATAAAGGCAAACTACTTATGCTTAAGCAAAGCAGCTGCGAATCTTAGCACAACATTCAAACCTATAGTGGCATGGATTGAATTCACACAGGTAAGCAGTTTACTAAATAAAATCATCACTTTCTGGTCCATATAAGTAACTTTTGGAATGCACCATACTTTGTTGTCAATATGTTCCTTCTATCACTGTAGGGTATGTGGACATTTGTTAGTGATGGTTGGATTGTACAGGTAATGTCATTTGTTTATTGCAGCACTTTGAACATAAAACTGTCAACTAAACAAATGAAATGGAGACAACTCATGCGCATTTGGTATTTATGCCATAAGCAGTATGTCACAGATGCAGGAGCAGAGGTTGTTGATGCAACTATTACTAATAGGAGATTCAACAATTCTGATCCAGAGGATATGGATAACTTCCATGCTATTCTTTGTGTGAGTATCGATAATACATAACTGTCAGAGTAATCATCTGTCTCACTATTTCTCATGATGCACTAAAGATCCATCGTTTCTTTTTGGAGAGCTGGAGAACTGTTACTTAGTTAAAATAATGTCAGAATGCTAATACTAGACAAGGGCAAAATTGGACATTTCTATGAAACACCAAAGGTTTTAGTACTTCACAAAAGTTTTAAATGACCCTCACTTGTTAAGCATCTAACATTAAGCTTTGGTTTATGTATTTTTCAGACAGTTGATGTGGTCATAGATCAGACATATGCTTCAGATCCTGCAGAGTACAAACTATCCACATTCTTGGAGAGCATTAATGTGGACCGTGACTCTTGTTTTAGTTTTGTAGCCAACCGTAGCATATGGAGATTTGATAAAAGAATAGGATATTCGAAGAAACTTGGTAATTCTTTTCTCTATGCTCTACACTAGGTCTCTTGATATAGTTTTGTTTTTGTGTTTTTACAAAACCATGCTCAAACTCCTGTGCCATGTTTTTCAACCTATGTAAAGGTCTAATGGAGTTTTGCTTTTGCTTTTCTTTTTTTTTAAAAAAAAAAAGATTGGTTCGATGGAGCTATCTCCCAGCCCCAGTTGGTTCTTGCTGATCTAATAGAAATTTTCTTTCCAACGGGGAATTACACAACAATTTACTTCAGGAATCTAATGAAGGTATTGCTGCTAATGCCCAGGCTAACTATTTTTTTTCTTAATTTAAACTAATTCACTCACTCTCCGGAACAAGGTTACTTATCAGTAAAACAATGATTACTCAGGATGAAGGGGTCACTGAAGTTGTCCCCGAAATGTGTAGTAGAAGCATATCAACACCCATGGAGCCAACAATCTTGCCCTGCCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011735