BGIOSGA011788

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Revision as of 09:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011788| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011788, complete gene.| tag = OJ1006F...")
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Gene Name

BGIOSGA011788

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011788, complete gene.

LocusTag

OJ1006F06.12

Ensembl Transcript ID

BGIOSGA011788-TA

Ensembl Protein ID

BGIOSGA011788-PA

Length

6888

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2156047..2162934

Sequence Coding Region

2156047..2156631,2158029..2158145,2158262..2158453,2160558..2160623,2160713..2160820
,2160917..2161000,2161483..2161584,2161723..2161836,2161915..2161995
,2162372..2162491,2162839..2162934

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2156047..2162934 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2156047..2162934 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGCCGGAGAGCGGCGGCGCCGGCAAGGGGAGCAATGGAGAGGCGGTGGGTTCCGGTGCAGTGGACAAGCACGCCGCGGTCGTCCGCCGCGCGGCGGGGATAGCCAGCGTGGAGGCCAAGCGGAGCGCCACCGCGGATGTCCGCCGCGCGGCGGGGGCTTCCGGGACCGTGGGTTACCCCGACGGCGGCGGGCGCCGGGACGACGAGCCCGTCCGCGAGGAGCTGCACGGCAGCGGCGGCGACTACAACGAGCCCTCCAAGTCCAAGCGTGTCCGCGGCGAGCCCCACGTCGAGCGCGCGCTCTCCGCGGTGTTCCGCGGCGAGGAGGCCTACGTCGAGCCCGCGCTGGGCGGGGAGGTCCGCCGCGAGCACGGCGAGGAGGTCCACGTCGAGCCCGCGCCGGGCGGGGAGGTCCGCCGCGAGCACGGCGAGGAGGTCCACGTCGAGCACGTCGTTGTACTGGACCACGAGCCGGTGGAGGCTACTGCGGGCTTGGTTCTCGGTGCTCCCGTTCCGGCGGCTGTACGCGCGGCCGTGTTAGAGGCTCGCGCTCTCAAGAACATGGAGGGTGCCAAAGCGGCTAAAGAAGCAAGAAAACTTTGTGAGCGCGGGAACTTAAATGGTAGCAACAATGGTTGCAATTCCAATTCACCCTCGCCTTCTGAGAAAAGAAGGTTTGCTGACCCTAAAGAAAAGATTTTTCAGAAATTTGATGTAGAGGCCTCCTACCTTACTGGGAATGAAGACAGTGATAGCAAGTACAGACGTTTGGTTGATTTATTCAACCAAATGATCTCTCTGATGGAAGCCGTTGAACATGGTCTGTCACTTGAAGATTCTAAGGACCTCGAACGTGAAATGAAATCAACTATTCACGAGATAAGAAAGGGTAGTGATGATTTAGTAGTTGTTCATGATGCTCTCGAGTTTGGACATTGTCGTTTGTCCCTTGCGGTTCCTAAGGAAGGCATTTTCGAGAATATAAATACTCTGGAGGATTTGGCAAATATGCCTGAATGGACACAAGAGAGACCATTGCGTGTTGTTACAGGATTTGGATATCTAGGAGAAAAGTTTATGAGAGAAAATGGTTTCAATCATGTTTCGTTTTTAGCTGGAGATGGAGCTCTTGAATCATATCCCGCTATGGGTATGGCTGATGTTATCGTGGATCTTGTGAGTAGTGGAACAACCTTACGTGAGAATAATTTGAAGGAAATTGATGGTGGAGTAGTTTTGGAAAGCCAGGCCACGCTTGTCGCATGTAGGAGATCGCTACACAAACGTAATGGTGTCTTGGAGATTACGCATGAGATGCTTGAAAGATTAGAGGCTCACCTCACAGCAACTGGGGAGATAATGGTCACAGCAAACATGAGGGGGAACAGTGCGGAAGAAGTGGCGGAAAGAGTTCTCAGCCAAACATCGTTATGTGGATTACAGGGCCCAACCATAAGTCCAGTCTACCGCTCACGTGATGGGAAGGTTGCTGTGGAATATTATGCGATTAATGTAGTAGTTCCACAGAAGTCTCTTTACAAGTCCATTCAACAGCTGAGATCTATTGGTGGCAGTGGAGTCTTGGTGACAAAGCTGACCTACATATTTGATGAGGAAACTCCTAGATGGCGCAAACTACTTTCGGAGCTGGGGTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAVPESGGAGKGSNGEAVGSGAVDKHAAVVRRAAGIASVEAKRSATADVRRAAGASGTVGYPDGGGRRDDEPVREELHGSGGDYNEPSKSKRVRGEPHVERALSAVFRGEEAYVEPALGGEVRREHGEEVHVEPAPGGEVRREHGEEVHVEHVVVLDHEPVEATAGLVLGAPVPAAVRAAVLEARALKNMEGAKAAKEARKLCERGNLNGSNNGCNSNSPSPSEKRRFADPKEKIFQKFDVEASYLTGNEDSDSKYRRLVDLFNQMISLMEAVEHGLSLEDSKDLEREMKSTIHEIRKGSDDLVVVHDALEFGHCRLSLAVPKEGIFENINTLEDLANMPEWTQERPLRVVTGFGYLGEKFMRENGFNHVSFLAGDGALESYPAMGMADVIVDLVSSGTTLRENNLKEIDGGVVLESQATLVACRRSLHKRNGVLEITHEMLERLEAHLTATGEIMVTANMRGNSAEEVAERVLSQTSLCGLQGPTISPVYRSRDGKVAVEYYAINVVVPQKSLYKSIQQLRSIGGSGVLVTKLTYIFDEETPRWRKLLSELGL</aaseq>

Gene Sequence

<dnaseqindica>1..585#1983..2099#2216..2407#4512..4577#4667..4774#4871..4954#5437..5538#5677..5790#5869..5949#6326..6445#6793..6888#ATGGCGGTGCCGGAGAGCGGCGGCGCCGGCAAGGGGAGCAATGGAGAGGCGGTGGGTTCCGGTGCAGTGGACAAGCACGCCGCGGTCGTCCGCCGCGCGGCGGGGATAGCCAGCGTGGAGGCCAAGCGGAGCGCCACCGCGGATGTCCGCCGCGCGGCGGGGGCTTCCGGGACCGTGGGTTACCCCGACGGCGGCGGGCGCCGGGACGACGAGCCCGTCCGCGAGGAGCTGCACGGCAGCGGCGGCGACTACAACGAGCCCTCCAAGTCCAAGCGTGTCCGCGGCGAGCCCCACGTCGAGCGCGCGCTCTCCGCGGTGTTCCGCGGCGAGGAGGCCTACGTCGAGCCCGCGCTGGGCGGGGAGGTCCGCCGCGAGCACGGCGAGGAGGTCCACGTCGAGCCCGCGCCGGGCGGGGAGGTCCGCCGCGAGCACGGCGAGGAGGTCCACGTCGAGCACGTCGTTGTACTGGACCACGAGCCGGTGGAGGCTACTGCGGGCTTGGTTCTCGGTGCTCCCGTTCCGGCGGCTGTACGCGCGGCCGTGTTAGAGGCTCGCGCTCTCAAGAACATGGAGGGTGCCAAAGCGGTCAGTATCTTGCGTTCTTTTGCTTCGTTCGTTTCGAATCATCTAGATGAACATGGATTTGGATGAATTGCTGTAGGATGCGCATCCTCGTTGGCTCCGATGGTGATTTTTTTTTTCTAGTAAATTTGCTGTGTTGGGGAGCGGCCTGTGCGCATTAGGATTTTTGTGATTCCTTTTGTTTTGATGGCTTATGGGATTGCATTTCTATTCAATCTGTTTCTGTATCTGTTTGGTAGCGTCAGATCAGTTTTAGAACAAAATTTCGGCCCAAAAATGGTTGCCCTGTCCTTTTGTTTTGTTGATAGTCCACCGGTTTCTTCTACTACCTGTGGACTCTTAATTTTTCATAGCACCCTTCTGCTCCTTTTGTTGGTAATTTCACTAATTTGTATCTCTTGCCTGCTCTATTTAAGAATAATCTCGTCATACTGTTTACTCACGTGTATTCTTATTTTTATTGTGAAACTGAAGTGTTTACATGAGGGGAATTAATGTGTACTTATTGGTAAATTTGTATTTGCTACAATCTTTTGTCTATTAAAGACTTGATGGACTCATGGAAGGGTGCAGTTATCTGTAAATTAGTTTAGTGTCTAATGTTTGTGCTCTGTTTTAGCTTGTTTATGCTCTTCTTAATTACTGATTCTCTGCTCATATTGTTATGTAATTTGGGCAGTCAGTCAAAAATTTTTCTTGTAAACTTGAAATGAAATGTTCGTGAACGTTGCTCATGTAAACCTTCATCCTTTCTGACCATTATAGCATTTGATATATTAATTTGGGTTGTGTTAATGCTCTTAGAAATTAGTTGGTGTTTTAGTTGTAAATGTTGTTATATTGTTATGTTTTGACTTTCTATACTGATGATTTAAACTGCAGTTCATGACTAAGAACAGAAGAGTTATTCTTCCTCGCTCTTTCTTATAACATATTATCTATGCATGTACCACATCTGTAGTTTCCTGTTTGCATGGAATCTTGATCATTGTTTGTTTACAGTGACTACTTAATTTTGTTAACTTGACACCATGTGATGTCTGAAATGTGTATTTGGTATTTTTCTGTACTGTGTAGAATATTTTGTCCCTTTTGTTTTCTGTTAAGATCTCATTACTGTAGAAAGTTTGTAAGAAATGCCCTAGGCGTCATCTATTTCTGGCTACACCCTTTGGATTGATGGCTTGGTTTGTAGGTTCTCTTTCATTGGTAGCTTCTCTCTGTTAATGTACTCTTAAGATGTGAGCAACATTTTTGCTGTTTCAGTTTCTTGAAAAAATGCGAGCACGGATAAATTTGTGCCGTGCATTGGATAAATTGGATTGTTCTTTACACTGCACTTTGTTTAGTTATGTATTCGAGCGCTTTTGTTTTGGCATAGCTGATATTTTCTGCTGCAGGCTAAAGAAGCAAGAAAACTTTGTGAGCGCGGGAACTTAAATGGTAGCAACAATGGTTGCAATTCCAATTCACCCTCGCCTTCTGAGAAAAGAAGGTTTGCTGACCCTAAAGAAAAGGTAAAAGTATAATAAAAAGTATTGCTGGCTTACAAATTATTGCGTTGGATAAAATGAGACATATTTCCTTCCCCATTGTTTTGAGTCATATGTGACTCTTTGTTTTTCCTTTTCAGATTTTTCAGAAATTTGATGTAGAGGCCTCCTACCTTACTGGGAATGAAGACAGTGATAGCAAGTACAGACGTTTGGTTGATTTATTCAACCAAATGATCTCTCTGATGGAAGCCGTTGAACATGGTCTGTCACTTGAAGATTCTAAGGACCTCGAACGTGAAATGAAATCAACTATTCACGAGATAAGAAAGGTCCGTCAGACTATAAGAGTGATGGGTGGCAAAGCCCCAAATACCCCACCAGAGTTTCTATTCAGAGATGTCTTAGAGTAAACATTCTTCGTGAAGAGGTTTCGGCTCTCTGTCGTGATTTCTGTTGTGTCCTGATTTCTGTACATGAATGAATTTGTTTAGTTACTGACTCAAAGTGTTGCCTATGATTCCTGGTAGTTTTTTTGGCTGGGTTTTTTTACCAAGGCTCGCAGAGGGTGGTCTGCTCCAGTAGTTCTGTCCCAGACCCTCTATGATTCTCTCTCTTTTGCTGCACTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTTGGAGTTAATCTTAAGATATTTTCAACGTAATTTTTTTAGCGTTGCCTTTTTAAGTCGCTACGAACAAATATATATAAGTTTTAAATATAAATTAATTTTTATTCCCTAATAACCCGTTTTGACTTATTAGGGAATATGGGCAACCGAGGAGGCTTTTCATTTCACAGATAAACGACCCAGGTCTTTGTGCTCGGTCAATCATTGGCAAATAATTAGTAGTACTACAGAACTACAGATAACAAAAAAAAAAATCAATAGAATACACTTCGAGGTATCGCCAATGTATCATAGTGGCACTGAGGTGAGGGCTATAAATGGAATATTTAATGGCTCTTTGTTGTTCCTACTTGTGCTGTTAGTACTTTAAATGTCATTAATACCGGATATTACCACAGCAGTTCATATAAGATGATAGTATCTCCAAAGTTTTCGTCAACATCCTCTCGGTCTATCCAGGAAGTGGCACACGTACACCTCCTCAAGCCTTCCGTGTTGTACGTTCCGGAGTTAGAAGAGTTAATTACTCACATGGAGTGCTGCTTGCCTCTTAATTAAGACGCAAGTCGTTGACAGCAACCTCCTTGTTCTCTCATTCTTCTTGTCTGAATAATGTCTCGGTTAAAGAAACCATTCAATCTAAGAGGCAAGTTGTTTTTTCAAATTTGCATGACCCTAGTTGACACATGAGTTCAGAAAATGCATGTACGGGAACAAGATATTGGTAGCGTCCTATGTTAATTAATGAGTTAGGGAATCTGCAATGAGTCAAATCAAATACATTTTCTAATAGTACTTTGCGGGCTTAAGGTCAGGGCATAAGTTATTGCATACTTCGTAGAATTCATTTAGAATGCCTAACTAAATACTCCCTCCATCCTAGAATATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCGCCTGCGCTCTTCTGCTGCGGCGAGCTTGGCGTCTGCTGACGCCGAGTGCTCGAGGCGACCGAACGCTGAGACCGAGCGTCGGACATGGCGCACCTCCGGGGGGCTGCTGTGTGGAGAGGGGGAAGGGAAAGGGGAAGGAGGAGCAACCGGTGCTGCTGCTGCTGCTGGCTGAGAGCTCAACCGAGCTTGGGAAGGGGTGGAACAAGAGATGTTTAGCCTACAGGAAAGTGTGGCTCTGATACCAGATGTTAGAATTTCAATGGTTACTCTCATTGAGAAGAGGATGGCACTCGAGATGGGGCAATTTTCTGGTTTTCTTCATTCACTAAACACAAAAGCCATATCCTCCCAAAGAGGATTGGATACATATTTATAGCTGCTTGTAGCAGCCATGCAGCCATGCTAGTCTAAGAGGGTGCTGTCAGCATCCCAACAAACTGTCCTAGAGCAGAGCATCCCAACAAACTGTCCTAGAGCATCTCAACAAACTGCTGTCCTAACTGTCCTAGAGCATCCAAACTGAAAGTAGAGATGCTGTCCTAGAAAGCTGAAAAACAGGAAAAAGGCACCACAAGACCAAGACCAACCAGCCAAGACTTATTCCTACAGTGCATACCGCATACCTCTAGTTTCATACTAAGTTTCTTCTATACTTATTTATAGCATACATAATGTTCTTAATTTAATATTTATTTGACTTTCTTAGCAAGGCTTTAATAGATTTATACTTGTACTTATCTGAGATTTCCTGTGGCAGGGTAGTGATGATTTAGTAGTTGTTCATGATGCTCTCGAGTTTGGACATTGTCGTTTGTCCCTTGCGGTATGGTGTTCTAGAATTGCATCCATGCGTACTAGTTGTTACTTGGTTGAAGTTTGTATCTGTCTGAAACTGTCAAATTGCATGATCAGGTTCCTAAGGAAGGCATTTTCGAGAATATAAATACTCTGGAGGATTTGGCAAATATGCCTGAATGGACACAAGAGAGACCATTGCGTGTTGTTACAGGATTTGGATATGTATGGTCGTGAATAAACTCAAAGTTGTTCAAGTGCTCCCCCCCTCTTGGACATTAATTTGCTGTTCATTTACCTAGTTATTTTATTGTATTGCAGCTAGGAGAAAAGTTTATGAGAGAAAATGGTTTCAATCATGTTTCGTTTTTAGCTGGAGATGGAGCTCTTGAATCATATCCCGCTGTGAGATTGCACTTCTCTAATAACTTACTTAGGTTTCTTTGTAACTTAAACTTCCTTTCTTTTTTGTACTTCTTTGTTTATCTAGTTGATATATTGATGGCACAATTCTGTTCCTCCATAATAGTTATATTTAGATCCTAGTAAAACCAAATTTGCATATTTCTGTCCCAATATTTCAGCTTACAAGATTGGTATTTGCATGGTATTGTCTGTACCGCTGTAGTATTGTTTGTTATTTCTATTTTATTATGATGTTAGTATGTTACAAAGCTGCATGGAATTTAAGTATACCAATACCATACTTTACTGTAATTTGAATTTGAATTGTAATAGATCTGAACTGAAATTTGTCTTTACTTCTTTATTCTATATTGGCATGTTTGTCTTGATTCTTGATATGTGAACTTGTGTGTTCTTACATAATACACAATTAGCCTATCAAGGTTAACAAATGCTAAGAATTCTTTTTTCCTCCTGTGAAGATGGGTATGGCTGATGTTATCGTGGATCTTGTGAGTAGTGGAACAACCTTACGTGAGAATAATTTGAAGGAAATTGATGGTGGAGTAGTTTTGGAAAGCCAGGTAAGCCTAACCTCTCCCTCCCTTCCTCTCACGCGTGCACACATGCATGTGGGAGAGCAGATGCCTGGTATTTTAATTGACATTTGCTTCATCAAAAGATAAATTGTGCTCATTTACAAGATATGTAATATCACGCAGGCCACGCTTGTCGCATGTAGGAGATCGCTACACAAACGTAATGGTGTCTTGGAGATTACGCATGAGATGCTTGAAAGATTAGAGGCTCACCTCACAGCAACTGGGGAGATAATGGTAAACCAATTTTGTAGCTTAAATTGGGTGATTACTCAATTAATTGCTTACTTATTATACTTTACATTGCCATATAAGGTCACAGCAAACATGAGGGGGAACAGTGCGGAAGAAGTGGCGGAAAGAGTTCTCAGCCAAACATCGTTATGTGGATTACAGGTATCACTAAAAGTATCCAAAGTAGTATTTTACCTTTTTATATACTGACCATGAATATGTGCACTTATGTGGCAGATGCTAAAATATCTCTTTAAAAATAATATTATTTTCCACATTCATAAATTAGCACTCTATAATCTTGAACTGGAAATATAATTGTATTGTAGCTGCTCTAATATCTAGACCTGATTAATCTTCATCATAATCTGGGCAATTTAAAGCTTTTAGGTCCTTTGAAATAAAACTAGTTTTGCATTTCAAACTTATAGCAAAAGCTTTGCTCATGATTATCTGACTGGAACCACTGTAGTTTGAAATACTGATGTGGAAAATCACTAAAGCTTATGAGTTGATTCACTCATTTTGATTTAAACAGGGCCCAACCATAAGTCCAGTCTACCGCTCACGTGATGGGAAGGTTGCTGTGGAATATTATGCGATTAATGTAGTAGTTCCACAGAAGTCTCTTTACAAGTCCATTCAACAGCTGAGATCTGTAAGATATTTTACCTCAATACTTTTAAACGGAAATGTGTGCCTATCTCCCCTTATTCTCCCTTTTCCTTTTCTGTTTCATGTGGGCAATTGTCTCTTATCTTTAGAAATTTTCTAATGTTGTAGTAAAAGGTATATTTATGTGCTTATATGAGTAATTATCAAAAGATGTTTCTGTGCTATTCTCACTGCTGTCAGCGCAAAAGATAAATCTGATATGGGAGCTCATAATAGAACTTATTGTCAGAACATATATGGCCCTTGCTATATATTTTTTGAACGTGTATGGCTTAGTTCCATTGATAAATCCAATTGTTTTAATGTGTACTCATTAACTTGTAACTGCAGATTGGTGGCAGTGGAGTCTTGGTGACAAAGCTGACCTACATATTTGATGAGGAAACTCCTAGATGGCGCAAACTACTTTCGGAGCTGGGGTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011788

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011788&oldid=56611"