BGIOSGA011809

From RiceWiki
Revision as of 09:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011809| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011809, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011809

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011809, complete gene.

LocusTag

OS03G0137500

Ensembl Transcript ID

BGIOSGA011809-TA

Ensembl Protein ID

BGIOSGA011809-PA

Length

2741

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2450866..2453606

Sequence Coding Region

2450866..2450914,2451570..2451637,2451727..2451837,2452349..2452435,2452661..2452869
,2453300..2453606

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2450866..2453606 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2450866..2453606 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGATCTTTTGTACAAGGACTACAATTTTGACCAAAAGTTTTCTTTAACGACAACTAGCAATTCTGGTTTGGGTCTAACAGCCACCGGTGTGAAGATAGACGAACTCTTCATCGGTGACATACAGACACAACATAAAAGTGGCAAAACCACTGTTGATGTCAAGATTGATAGTGAATCTAGAGTGTCAACCACAGTCACTGTTGATGAAGCCCTTACTGGTCTGAAGACTTCTTTTAGCTTCAGGGTTCCTGATCAAAAGTCCGGGAAGCTTGATTTGCAATACCTTCATGACCATTTTGCACTGAATTCTACCATTGGTTTGACATCAACGCCTTTAATTGAGCTGGCAGCAACTATCGGCATGAATGAACTTAGTGCTGGTGCTGAGGTTGGATTCGACAGCACTTCAGCTTCTGTTACTAAGTACAACTCAGGGATCTGCTATAACAAACATGATTTTTCTGCTGCCGTACTATTGGCTGATAAAGGGGAGACTTTAAAAGCTTCTTATATCCACACGTTCAATGAAACCAATGGAGCTACAGTGGCGGCTGAAGTAACGCACAAGTTGAAAACAAAAGAGAACTATTTCACCATCGGGAGCTCTCATGCTATTGATTCTTCGACGTTGCTGAAGACAAGATTTAGCAATGGTGGCAAAGTTGGAGTTCTCTGTCAGCATGAGTGGAGGCCCAAGTCTACTGTAAGTATTTCTGCCGAGTATGATCCCAAAGTGGTGAGTTCGCCTTCAAGATTCGGCGTGGCCATAGCCTTGAAGCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MSKGPAPFLNIGKRAKDLLYKDYNFDQKFSLTTTSNSGLGLTATGVKIDELFIGDIQTQHKSGKTTVDVKIDSESRVSTTVTVDEALTGLKTSFSFRVPDQKSGKLDLQYLHDHFALNSTIGLTSTPLIELAATIGMNELSAGAEVGFDSTSASVTKYNSGICYNKHDFSAAVLLADKGETLKASYIHTFNETNGATVAAEVTHKLKTKENYFTIGSSHAIDSSTLLKTRFSNGGKVGVLCQHEWRPKSTVSISAEYDPKVVSSPSRFGVAIALKP</aaseq>

Gene Sequence

<dnaseqindica>1..49#705..772#862..972#1484..1570#1796..2004#2435..2741#ATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGGCAAGCAGTGTCTATGTCTCGGAAGCCTGTAGTTTATTTTCCGTCTCGCTTCGTGCCACTTTGTGCATTTTGCGGGTCAAATTTTGTTTGGTAGTTTAACTTTGTTGTCTTAAAAAAAATTATTAGAAGCAGTGTGTGTTTTCTTAGTATCTCTTTTATGCTGCTGTGTACTGTCTGTATGTGATACCTTTGGCACAACTTGGAATCCAGTGAGGTCAAATGACTTTGCTGGGTATCACAGGATTTATGTGATCATCATTCGATGCGTCATACTCGCAGATTTCATTTAATTATTACAATAATTTGACATTTAATACCATAGAGAACTGTCACTGTATATTGTATATTGTCATTGTTCATCCACATGTATGGATCATGCATAAAGAAACAGCAGCTCAATTCTGACGGAGACCTAAATATCACTGAATATTCTATAGGCTGGGATGCTTATTGCTTACCGGAACACATCTATTGATTTACCTCAATCTTTCATCTTTGTCTTTTTATATCTGATATTCTGATGTGGTTTGGCAAGTGCAGATAAATTTTATTTTTTACATGGTTTTCTTTGTTATTTACCTTTTCGCTCTGATTTTCGTGTTTTCTTAAACGACTCACACTTTCCACTAACATATTTGCTTGTTATACCATATAGATCTTTTGTACAAGGACTACAATTTTGACCAAAAGTTTTCTTTAACGACAACTAGCAATTCTGGTTTGGTAAGGGTTTCACTCCTTCTGTTCATGGTTTAGTCCCTACCAGAAAGTTGTGAAGATACCATGCTCACAGCTTCTACTTTTATTAATAGGGTCTAACAGCCACCGGTGTGAAGATAGACGAACTCTTCATCGGTGACATACAGACACAACATAAAAGTGGCAAAACCACTGTTGATGTCAAGATTGATAGTGAATCTAGAGTAAGTTCCCTGTGTTTGGCTCTCTAGTTTAGCTATATTTGTAAAGCCTGACTTTACTTGTGTAGCATTAGCTATTGTTTTGTTGAACAATCGGTGCTATTTTTTGGTATTTATTATTACATATCATGCCATCAAAAAGTTATGCCGTATGATATGGAGCTAAGTTGCATGTATAGAAGATGGTATGAAGAAACATACGTTGCTACTGACTTAATTAGCCATTGGATTTCAGTATGGTATTTAGACATATATGAAGCAACATTCATTGCTACGGACTTAATTAGCCATTTGATTTCAGTATGGTATTTAGACATATATGAAGCAACATACATTGCTACGGACTTAATTAGCCATTGGATTTTAGTATGGTATTTTAGAAATATAGACTTCTGCACTTGTGCATCCATAATACTCGTTCAGTGCCACGTTTTGCTTAATCTGTTTCTAGTTTGTCATCTCAGGGCTGTACGTCCTGTATACCTGTATCTCACCACAGTCATTCTGTTTACAGGTGTCAACCACAGTCACTGTTGATGAAGCCCTTACTGGTCTGAAGACTTCTTTTAGCTTCAGGGTTCCTGATCAAAAGTCCGGGAAGGTTGGTATATTCTGATATGGTGGAAGAATATCATTTTTTTCCCTCAAACATAGAAATTCAGTGGTGTTTCAACTAATTTAGTTGAACCATATCCAACTTGTCCTGACATTGTGTTTACCAATCCCCTGATGGCTTATAACCAATATTTTTGTCTTGTAGTTTTCTGTAATATTTGCCTTTCTGAATGTTCTACTGTGCTAATGCTTAGTCTTTTCTCATTGGCAGCTTGATTTGCAATACCTTCATGACCATTTTGCACTGAATTCTACCATTGGTTTGACATCAACGCCTTTAATTGAGCTGGCAGCAACTATCGGCATGAATGAACTTAGTGCTGGTGCTGAGGTTGGATTCGACAGCACTTCAGCTTCTGTTACTAAGTACAACTCAGGGATCTGCTATAACAAACATGATTTTTCTGCTGCCGTACTATTGTAAGTTTCCCGAGTTTCTGCTTTGCTTAAGCATACAACAGTCTGCGCTATGCACGTGCATTGTTCCAATATCGTACTCAGTTACATCGTTGATTTGCACTTACTGAAGTTAACCCATATTTTTTTCCTATAATTCTTGAAATATAACATGAATGAACATAAGTTTTGGTCATGATTGATATTTTGAGCTTCCAAAGTGGATGCTCTAAAGGTGATGAACTTGACTGCTACCTATAGTTAAAACAGCACGCAATAGCACTATTTGTACGTACCAGGGCAGCAACACAATATAATGTGCTGGTATCTGTACAATTTATATGCAATATGTTGTTCTTATGTCTTCCTGTATTTGTCTTCTGCATATTGTCCCTAAGCAACATCACCTTTACCCATGCACTGATAAATAGTTTCTACAATTGTTACCACACAGGGCTGATAAAGGGGAGACTTTAAAAGCTTCTTATATCCACACGTTCAATGAAACCAATGGAGCTACAGTGGCGGCTGAAGTAACGCACAAGTTGAAAACAAAAGAGAACTATTTCACCATCGGGAGCTCTCATGCTATTGATTCTTCGACGTTGCTGAAGACAAGATTTAGCAATGGTGGCAAAGTTGGAGTTCTCTGTCAGCATGAGTGGAGGCCCAAGTCTACTGTAAGTATTTCTGCCGAGTATGATCCCAAAGTGGTGAGTTCGCCTTCAAGATTCGGCGTGGCCATAGCCTTGAAGCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011809