BGIOSGA011994

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Revision as of 09:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011994| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011994, complete gene.| tag = OsI_102...")
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Gene Name

BGIOSGA011994

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011994, complete gene.

LocusTag

OsI_10284

Ensembl Transcript ID

BGIOSGA011994-TA

Ensembl Protein ID

BGIOSGA011994-PA

Length

4471

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4807174..4811644

Sequence Coding Region

4807174..4807294,4807452..4807583,4807699..4807787,4807935..4807992,4808534..4808689
,4808908..4809056,4809560..4809679,4809865..4810078,4810165..4810267
,4810374..4810421,4810619..4810664,4810999..4811186,4811295..4811457
,4811579..4811644

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4807174..4811644 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4807174..4811644 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATACTGGCTGCCTGTCATCTATGAACATAACTGGAACCAGCCAAGCAAGATCTTTTGCGGGACAACTTCCTACTCATAGGTGCTTCGCAAGTAGCAGCATCCAAGCACTGAAAAGTAGTTGTTTGCCAGGACTTTCCAAGACCTCCACTAGAAAACACATCAACTTTTTGGAAGCTGGACAACTATCTTCATTTTTCAGAAACAGTGAACAACCCACTAAACCATTACAGGTCGTGATTGCTGGAGCAGGATTAGCTGGTTTATCAACGGCAAAATATCTGGCAGATGCTGGTCATAAACCCATATTGCTTGAGGCAAGGGATGTTTTGGGTGGAAAGATAGCTGCTTGGAAGGATGAAGATGGAGATTGGTATGAAACTGGGCTTCATATCTTTTTTGGAGCTTATCCCAACATACAGAACTTGTTTGGCGAGCTTGGTATTAATGATCGGTTGCAATGGAAGGAACACTCCATGATATTTGCCATGCCAAACAAGCCAGGAGAATTCAGCCGGTTTGATTTTCCTGAAACATTGCCTGCACCCTTAAATGGAATATGGGCCATACTAAGAAACAATGAAATGCTAACTTGGCCAGAGAAGGTGAAGTTTGCTCTTGGACTTTTGCCAGCAATGGTTGGTGGCCAAGCTTATGTTGAAGCTCAAGATGGTTTTACTGTTTCTGAGTGGATGAAAAAGCAGGGTGTTCCTGATCGAGTGAACGATGAGGTTTTCATTGCAATGTCAAAGGCACTTAATTTCATAAATCCTGATGAGTTATCCATGCAGTGCATTCTGATTGCTTTAAACCGATTTCTTCAGGAGAAGCATGGTTCTAAGATGGCATTCTTGGATGGTAATCCTCCTGAAAGGTTATGCATGCCTATTGTTGACCATGTTCGCTCTTTGGGTGGTGAGGTTCGGCTGAATTCTCGTATTCAGAAAATAGAACTTAATCCTGATGGAACAGTGAAACACTTTGCACTTACCGATGGAACTCAAATAACTGGAGATGCTTATGTTTTTGCAACACCAGTTGATATCTTGAAGCTTCTTGTACCTCAAGAGTGGAAAGAAATATCTTATTTCAAGAAGCTGGAGAAGTTGGTGGGAGTTCCTGTTATAAATGTTCATATATGGTTTGATAGAAAACTGAAGAACACATATGACCACCTTCTTTTCAGCAGGAGTTCACTTTTAAGTGTTTATGCGGACATGTCAGTAACTTGCAAGGAATACTATGATCCAAACCGTTCAATGCTGGAGTTGGTCTTTGCTCCTGCAGAGGAATGGGTTGGACGGAGTGACACTGAAATCATCGAAGCAACTATGCAAGAGCTAGCCAAGCTATTTCCTGATGAAATTGCTGCTGATCAGAGTAAAGCAAAGATTCTGAAGTATCATGTTGTGAAGACACCAAGATCTGTTTACAAGACTATCCCGGACTGTGAACCTTGCCGACCTCTGCAAAGATCACCGATTGAAGGGTTCTATCTAGCTGGTGACTACACAAAGCAGAAATATTTGGCTTCGATGGAGGGTGCAGTTCTATCTGGGAAGCTTTGTGCTCAGTCTGTAGTGGAGGATTATAAAATGCTATCTCGTAGGAGCCTGAAAAGTCTGCAGTCTGAAGTTCCTGTTGCCTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MDTGCLSSMNITGTSQARSFAGQLPTHRCFASSSIQALKSSCLPGLSKTSTRKHINFLEAGQLSSFFRNSEQPTKPLQVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWPEKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLSRRSLKSLQSEVPVAS</aaseq>

Gene Sequence

<dnaseqindica>1..121#279..410#526..614#762..819#1361..1516#1735..1883#2387..2506#2692..2905#2992..3094#3201..3248#3446..3491#3826..4013#4122..4284#4406..4471#ATGGATACTGGCTGCCTGTCATCTATGAACATAACTGGAACCAGCCAAGCAAGATCTTTTGCGGGACAACTTCCTACTCATAGGTGCTTCGCAAGTAGCAGCATCCAAGCACTGAAAAGTAGTCAGCATGTGAGCTTTGGAGTGAAATCTCTTGTCTTAAGGAATAAAGGAAAAAGATTCCGTCGGAGGCTCGGTGCTCTACAGGTTCAACCTTTGTACTCTATTATTGCCTCACATTCCATCTCTTGTGAAAATATATTTGATTGGCTTTTCTGCAGGTTGTTTGCCAGGACTTTCCAAGACCTCCACTAGAAAACACATCAACTTTTTGGAAGCTGGACAACTATCTTCATTTTTCAGAAACAGTGAACAACCCACTAAACCATTACAGGTCGTGATTGCTGGAGCAGGTATGATATAATTCTAGGATTTGACAGATGAATAATTTACATATATATCTAACTTTGATAGCAGTCACATCGTGGTCTTAGCATTGTAGTTTTTAGCTTTGATTTTTTTTTTCAGGATTAGCTGGTTTATCAACGGCAAAATATCTGGCAGATGCTGGTCATAAACCCATATTGCTTGAGGCAAGGGATGTTTTGGGTGGAAAGGTTTTACTCTTATGCTTTTATGTTGCATTTAATTTTTTTTGTTATTCATTCTTTTTTTTTTGGTTGCCTTTATCTTAATAGCTCATATTCACTGTTAGTAGCATTTGTGGATTATTGTTTTTTTTTTTGGGGAAATGCCTTGAACAGATAGCTGCTTGGAAGGATGAAGATGGAGATTGGTATGAAACTGGGCTTCATATCTTTTGTAAGTAATAACTCTGGATTTTTTAGGTTCTCGTTGTGCTATATTTTATTTAGGTTATTACCGCCAGCACTGATAGATATCTCTAAGGGTTTTGAACAAAAAAACATGTATCAAACTCTTTCATCGATAAGGTAGAAATGCCATGTGCATTCGGCACGCGCAATTTCTTTTCCCCAGTCAGCCACCTTTTCGGTGCAGGTCGGGAAGTATGAAGTGATGTCTGAGGATTAACACACATGGTAGTTTTATTTTGTAAGAAACTTTTAGATTGGTTTTTTTTCACAGTACTAAAAAGTAACTTTTTACTAGCTTATATGGTTGATAAATTTTAACGTCACATAAATATCATGAGCTAATTGAATATATATCCTCCTGTTCATAGATAGTCTTCTTTCAACCTACTATTCCCTTCCAAACATATATGAATATGACAGATACTGTTTTTCCTTCCATGCTCACACTGTTTTGTCGTCCACAACAGTACATATGTGACATTGTTCATTTTGTGCCTGTATGTAACCATATACCTTTTTGGTTTAAGTTGGAGCTTATCCCAACATACAGAACTTGTTTGGCGAGCTTGGTATTAATGATCGGTTGCAATGGAAGGAACACTCCATGATATTTGCCATGCCAAACAAGCCAGGAGAATTCAGCCGGTTTGATTTTCCTGAAACATTGCCTGCACCCTTAAATGGTGAGATCATATGCAGCGCTGGAGTTGTTTAATTAAACCAAGATTCCCAGAAGTACATCGTATTGGTGGTTACTTTTGTTTTACTAACACATGACTGTAATTAGGGGGTATATTACTAGCAGCGTTAATGATAGATCAATAGATCATGCCATGGAGCTTTTATGTTGTCAATTGATGCCTATTTATTATTTATCATTGATCATGCGTGCATTTAACAGGAATATGGGCCATACTAAGAAACAATGAAATGCTAACTTGGCCAGAGAAGGTGAAGTTTGCTCTTGGACTTTTGCCAGCAATGGTTGGTGGCCAAGCTTATGTTGAAGCTCAAGATGGTTTTACTGTTTCTGAGTGGATGAAAAAGCAGGTATAAGTTCACAATATCAGTTTGTCAAGTCTCTGTGTACAAGACACATTTCTACCTCATTAATTTGGAATGGATATAGGAGAAGGTGTTGTAAGCTAGAAAATCTTTTATTTTCTAATAAAAAAACTGATGCCCTTTATTGTTGCATTCACATTGGGAAGAACTGGCAGTTCTGAGGATGAAATGCTTCATGTACTCAAGTTTATGCCCTTTATTTTGCCCAGATCCTTTTGCACAGGTTTAAGCTTGAGCTATGCTTTTAGTTTAAGACCACTGTTTCAGTTAAAGGTCAACAACCTTGCATGATTTCTTCCTCCACCTAGAAAAGCCATTGCACATATTGACAAAGCACACAATCCTGTTGACTATATTCTTTATGAGCTAATATACAGAACTGTTTTATACAGAAAACACAATACATATGCTATAGTTATCAATCTCTTTCCCTTTTTTTGGGATAACGGATTAATATGGTGCCTGATACAGTTGTTTGATCAGCACAGGGTGTTCCTGATCGAGTGAACGATGAGGTTTTCATTGCAATGTCAAAGGCACTTAATTTCATAAATCCTGATGAGTTATCCATGCAGTGCATTCTGATTGCTTTAAACCGATTTCTTCAGGTATTTATTATGTTGCTCTATGGTCATGTGTGTTGCATATGAGTAATTCTTCTGTTTTTTCCGGAGTAGTACCTTACGTATTACATCCTTCTTAGTGTTTCTTGTCTCTGTTGTTTCCTACCTTGAGGAAACTCAAATGAATTTTCACTTAGAGGCCTTTTAAAAAAAATTATGCAAATGTGTAGGAGAAGCATGGTTCTAAGATGGCATTCTTGGATGGTAATCCTCCTGAAAGGTTATGCATGCCTATTGTTGACCATGTTCGCTCTTTGGGTGGTGAGGTTCGGCTGAATTCTCGTATTCAGAAAATAGAACTTAATCCTGATGGAACAGTGAAACACTTTGCACTTACCGATGGAACTCAAATAACTGGAGATGCTTATGTTTTTGCAACACCAGGTGATTTTCTACAATCTTTGTTTCTTCTGCAGTTCATAAATTATATATATGCGGCTACTCATTTTAACTGACTAGCCTGTATTTAGTTGATATCTTGAAGCTTCTTGTACCTCAAGAGTGGAAAGAAATATCTTATTTCAAGAAGCTGGAGAAGTTGGTGGGAGTTCCTGTTATAAATGTTCATATATGGTTGGTTGGTTGAATTATTTGGTTCCAAGTCGGAAATTACTCATCATCGAGTTTGTGGTTCTCCTTATGACTCATATTAGTATTTCTGTTGGTTTGAACATTTCAGGTTTGATAGAAAACTGAAGAACACATATGACCACCTTCTTTTCAGCAGGTGTCTCTTCTAATTCCTCATCAGTTTTGCTGTCCTTTCACTGCCTCATGCATTTGCTCTGTGCTATGACTGGTTTATGAACTAAAACGATTTGTATTGCCCAAATTGGGCACATTCTATCCTGATTTTGTATACATTCTTGATTAATACCAAATATCATATGTCCCATGTATTGATCTTGTTCCCTTTTCTTTCAGGAGTTCACTTTTAAGTGTTTATGCGGACATGTCAGTAACTTGCAAGGTACTAACTAGGAGACATTATATGTTACGAAATAGTAACTATCTGTCATGTATTATTGCTCTTGTGTATTTATTCTTGGGTTTACCATCTTCAAGCATCACATGATATTTATTTTAGTAGCTGTAACAAAAGACCCAAAAGTGCATGTGTTACAGAAGGAATCCAGTATTAATTATTAAACTTGGAAAGTAGATATATTTTATTTCAGATTCATTTAGGCAACATGTCACTTGGCTCTAGAGTCTAGATTTTATGGACCATAATAGCTCAGGAAATTAAAGACATGGATGCCTACTGAACGGTTTTCTTTCCTTTTGTTTTGAACTCTTTACAGGAATACTATGATCCAAACCGTTCAATGCTGGAGTTGGTCTTTGCTCCTGCAGAGGAATGGGTTGGACGGAGTGACACTGAAATCATCGAAGCAACTATGCAAGAGCTAGCCAAGCTATTTCCTGATGAAATTGCTGCTGATCAGAGTAAAGCAAAGATTCTGAAGTATCATGTTGTGAAGACACCAAGGTGAGGACATTTTGCAAGAGCGCCCCCTATCTGATATATCATAGGTAGGTCTAATAGTTGGATGCACACTTCTCTCACGTTCCTTTCTTTTCTGTCTCACTGTTACAGATCTGTTTACAAGACTATCCCGGACTGTGAACCTTGCCGACCTCTGCAAAGATCACCGATTGAAGGGTTCTATCTAGCTGGTGACTACACAAAGCAGAAATATTTGGCTTCGATGGAGGGTGCAGTTCTATCTGGGAAGCTTTGTGCTCAGTCTGTAGTGGAGGTAAACGCTGCTCTCCATGGTTCTGTTTGTACATAGATGCATCAGACTTGTATTGTTGTCTTGGTGCAGTTCACAATGATTCAGTTTTGTAGGCTAATGAGTTATCACTTGCTGATTTCAGGATTATAAAATGCTATCTCGTAGGAGCCTGAAAAGTCTGCAGTCTGAAGTTCCTGTTGCCTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011994