BGIOSGA012164

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Revision as of 09:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012164| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012164, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA012164

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012164, complete gene.

LocusTag

OS03G0227300

Ensembl Transcript ID

BGIOSGA012164-TA

Ensembl Protein ID

BGIOSGA012164-PA

Length

7175

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7155533..7162707

Sequence Coding Region

7155533..7155631,7155959..7156190,7156874..7156953,7157732..7157770,7158308..7158326
,7159200..7159256,7159836..7159963,7160048..7160116,7160520..7160605
,7160689..7160798,7161336..7161386,7161879..7161937,7162230..7162274
,7162409..7162483,7162591..7162707

Genome Context

<gbrowseImage1> name=IndicaChromosome03:7155533..7162707 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:7155533..7162707 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTGTTGCTGCCTCCGTGCCAGCACGGCGCCCCGCTTCCTCCTCTTCCGCGCCGCCGCGCGGCGAGCCCCATTGCCGGTCGCGGTTTCCAGGAAGGGTTTCTCGGAACAGTCCGTATTGCCAATCACAGACATGATCGAGAATTTTCAAGGACCATCCATGGAGAACATTCCACGAATTCCATTATATGATGATAGCTTGCCCTCAAGCTTGTTGACAACTTCTCCGAATCCTAGTGATAGTGTAGCTCATGCTGACCCTTCAAAGAGTAGAATAATGCTTGTTGATGGAACCTCAGTAATGTACAGATCCTACTACAAGATATTGGCACAGCTGCAGCATGGTCAATTGGAGCATGCTGATGGAAATGGAGACTGGGTTTTAACTATATTTAAAGCTCTGTCACTGGTTCTAGATATGCTGGAGTTCATTCCATCTCATGCAGCGGTGGTGTTTGACCATGATGGAGTCCCTTATGGTCATTATACTGCCATGCCATCCAAAGAATGTCACATGGCAAAAGGAATGACTTTTCGTCACATGTTATACCCTTCCTACAAGAGCAACCGCATCCCGACACCAGACACCATTGTCCAGGGCATGCAATACTTGAAGGCATCTATTAAAGCGATGTCAATCAAAGTGATTGAGGTTCCTGGTGTCGAAGCTGATGATGTTATTGGCACACTAGCTGTCAGCAGTGTATCTGCAGGCTACAAGGTACGGATTGTCTCCCCTGATAAAGACTTCTTCCAAATTCTTTCACCTTCTTTACGTTTGCTGAGGATTGCTCCTCGTGGTTCTGGGATGGTTTCATTTGGAGTTGAAGACTTTGTCAAGAGATATGGAGCACTGAAACCATCACAGTTTGTTGACGTTGTTGCGCTTTCTGGAGATAAAGCCGACAATATACCAGGAGTTGAAGGGATTGGAGATATTAATGCGGTAAAACTGATAACTAAGTTTGGTTCCTTGGAGAATCTGTTGAAATCTGTGGATGAAGTTGAGGAAGAACGAATTAAACAGGCTTTGATATCTCAATCTGAACAAGCAATGCTTTGCAAAAGCCTGGCCACATTACGTTCTGACCTTCCATCCTATATGGTTCCTTTTAAGACATCGGATCTTGTGTTTCAGAAGCCAAAGGATGATGGAACCAAATTCATAAAACTCTTGCGAGCTTTGGAAGCATATGCAGAAGGCTCGTCAGCAGACCTAATCATAAGAAGAGCCGCCTATCTTTGGAACAAACTTAACTCATGA</cdnaseq>

Protein Sequence

<aaseq>MACCCLRASTAPRFLLFRAAARRAPLPVAVSRKGFSEQSVLPITDMIENFQGPSMENIPRIPLYDDSLPSSLLTTSPNPSDSVAHADPSKSRIMLVDGTSVMYRSYYKILAQLQHGQLEHADGNGDWVLTIFKALSLVLDMLEFIPSHAAVVFDHDGVPYGHYTAMPSKECHMAKGMTFRHMLYPSYKSNRIPTPDTIVQGMQYLKASIKAMSIKVIEVPGVEADDVIGTLAVSSVSAGYKVRIVSPDKDFFQILSPSLRLLRIAPRGSGMVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLITKFGSLENLLKSVDEVEEERIKQALISQSEQAMLCKSLATLRSDLPSYMVPFKTSDLVFQKPKDDGTKFIKLLRALEAYAEGSSADLIIRRAAYLWNKLNS</aaseq>

Gene Sequence

<dnaseqindica>1..99#427..658#1342..1421#2200..2238#2776..2794#3668..3724#4304..4431#4516..4584#4988..5073#5157..5266#5804..5854#6347..6405#6698..6742#6877..6951#7059..7175#ATGGCGTGTTGCTGCCTCCGTGCCAGCACGGCGCCCCGCTTCCTCCTCTTCCGCGCCGCCGCGCGGCGAGCCCCATTGCCGGTCGCGGTTTCCAGGAAGGTACATGCTATAGCGCCCCCTTCTCTTCCTTCTGATCCCTTTTCCTTGGGGAGTGCACGAATCGAAAACAATCAGCATATTAGCTAGACGCAATGAGGTTTGGGGCAGCGCACAGCCATTCCACCAATGCTTCAATGACATTGCCAATGTTTGTTGTTCATCGGGCCACTGTTGTAATGTTATGCTGCAAATTAGACTATCCAAACATTTTTTTCTCTTATTATAGATGATAGTTATTCAAGGGTTATATACGGTCACACTGTCATTCAATCCAATGATTTGAATGTAAGATAATTAATGTTACTGAAATTTTCTATGTAATATCAGGGTTTCTCGGAACAGTCCGTATTGCCAATCACAGACATGATCGAGAATTTTCAAGGACCATCCATGGAGAACATTCCACGAATTCCATTATATGATGATAGCTTGCCCTCAAGCTTGTTGACAACTTCTCCGAATCCTAGTGATAGTGTAGCTCATGCTGACCCTTCAAAGAGTAGAATAATGCTTGTTGATGGAACCTCAGTAATGTACAGATCCTACTACAAGATATTGGGTAAATGTTTCCTGATTCTCTTTGTTACATCTGTATTGGTATATTATGTTTGGCTTCTCCTCCTTATCAAGGTAAATGCATGTTTAGAAAATAAGTGTTTTGATATTTATATTTAAACTAAATTCCACTGGCATGATTAATACATGGGAACTGAACATTTTTATTCTTCCTATAATGTGAAGGTACAACAGAATGTTGCAATATGTCCTAGATACACACAGACACATATGCACAAAGGGCAAAAGAAGTTGTACATGTGCCCACACTTGATGTTTTATTTCATGACGTGAAAACATTTTCTCAATTTATTCTCATAATTTGGGCATGGTTTTTTGTGGTTTAACTTCTCTGCTGCTTTCCTACCCTGAGAACACCCATCCATTATCTCAGTATATATCTGTCTTGTTGAACTGTGCTATGCTGTCATAGCATCTTATAAGCAGCAGAAAGTTTCATTATTGGTTTCCGGTAGTATGTTCCTTTCTAATTCCTTTAGGATAATCATGTCAAAGGCACTCAAACAAAATCATGTTTTGCAAAACTACCATAGTATTTTTCTGCACAAAACTGGTTCAGCTGCTCACATTAAAGAGCACTAAAATCCAGGGTTAATTTGGAGTTAGGTGCCCAATTGCATTAATTGTTGGATTCAACAGCTTTATTTTTTTTCCTCATGTATGCAGCACAGCTGCAGCATGGTCAATTGGAGCATGCTGATGGAAATGGAGACTGGGTTTTAACTATATTTAAAGCTCTGTCACTGGTAAGTATATTTTTTTATAGATTTTTTTGTGGCATACTTGTTAATAAGCTTAAATTTATTCATAGTTCGTTTTCCGGGTCCCTTTAATGATAGTCCTTTTTTTTGGTTGCTTCACCTAATGTTCGTCTGAAACGCATCTTCTAGGCTTCTAGCACAATGGTCTTCATCTGTGTTTCTAGTTAAGGTTGACTATGGTACATGTGTTTGTATTTTGTTCTCGTTACAAATCTATCATCGTACAAGTAGGAAGTGCAACATTGTTGAAGTGGAGAAATATTAAGCAACGTCTTTTGTAGATAAGCAAGGTTTTCAAACTGCTATGTTGCAAAACGTGGATTGGGTAGTGAAATTTTGACACACATGCTGTCTTTAAGTGGCATTGTTTAATGAACCAGCATGAGATAAGACTTACTTGCGATGAATAAGTGTGATGACAGAAGATATACTTTTTTCTTTAGTATGCTTGAGATGAACTGTTGGTATTTGGAGTTGTTGGAAACTGATGATTTACTAAAAACATCGCCTGTTTGAAAAAAAAAGGAGTATATGTTAGCCTCATAAGTTTATCCCCGGTTGACATCTGTCCTTTGTGGATCGTTATAGATTTTTATCATGTGGCGGTGTTACAATTCAACATGTTAACCTTCTGCCTCTACACAGAATCTTCTTTTCTCGTTGTAATATTTTATGACATGCGTTCCTTTGTTGTGATTCCACTTGATTTTGTTTATAACATGTGTGATCCCTATTATAACTACATTGCTTTTTATATCTCCAGGTTCTAGATATGCTGGAGTTCATTCCATCTCATGCAGCGGTACGCTCATCTTTTTTGTAGCCTAAAATTATATGGTCTTGTTCATATCTGTCATTTTTCTCATGGAACTTTTGTTAAAATAAAGTGTTTTAGAACATTGTTGGATGAATCATAGAGAATTTTTAAAACCCTTATATATAACTAAGATCACAGACACCCCTTGCAATTCCAATCATATTTCTTGCTAACAAAATGTGAAAGTTTCATGTCTATCCTTAGGAACTGGGGAGCATTAACACATGGTGCTAAACCATGGTAATGAGAAGTGCATATAAGCAACTTAAATTGTATGTTTAGCCCATAATTAAGGATTCAAGGGCCAATGCGCCAAAGGAGTATTTATTTTACCATTATACTGGAACATAATACTTAATATTTCCAGAATATTTAGAGGTTACTGGCTTACTGCTAGGAAACCAATAACCAGGTGCAGTGTAAGCATCATTTGTAGAAACCACAGTTTGTTTCTGTATGTGGTTTTATGTTTTATGCCTCTTAGCATTCCTTTTCCTTATGGTACTTTGAACACATATGCAGGTGGTGTTTGACCATGATGGTGAGCTTCTTCAATTGGATAATTCTCATATTCACTGAGTAAACTTTCACTTTATTATTTTAGTATTTTGCTGTGATTGTTTGTTGATTGCTCTCTGCAGCAAACACTTGGTAAATTTTTCTCTGTAAGCTTTGAGCATACGTAGCATGAGATCTTGTCCTGTCTGCAACTTGTTAAATGGCAACGGATGGTGGCAGTGGTCAGCAGTGCCTGTAATGGGGAGGTCTAGCCTCCTGGAAACAGAGCTCAAGGAATCTTGAGTCTCTGTCACCTCTTCATATAATGTCAAATCTGTCCTTAAATCCTGGCTTAAAACATACATGCTCTTGAAGAATTTCTTGTGCTTCTTGTGTATGTAACTCATATCAAGACAGAGTAGTAGCTGAGAAATAATATGAATCAGGAAAGAAACAAAAATTCTCCATCTGTCTTTTTAAGAAATGCAATATATTAAGACAAAACCTTCCACTTTCCTGCTCATATATCCCATTCTCTGATTTGTTCCTTTAATTGCTGATTGGAACAACTGGCTTTTTCCTCACTTTCTTTTCTTACTAATCCTTGTTGAAGTGTACTATGATTTCCCTTTTTTTTTCTGCACAAAGGATAGTATTTGTAGATTTTGATATGACAACAAATAAATGTTATTGGCCTCCCATGTGATTTTATCTAATATAGTTCAATTCAAGATGCATGGCTTAAGTTTAAATCCATATAAATGTTTCTGTGGAGGGATTCTACTTGTTTGGATCTACATCCCCTGATTTATTAGATCATAAGAAAAATCCCGGCATCTTTACTACGAAATTTGAAATGATACATTTCCTTAAAATTCTTAGAGTAACAAATAAGTGGCCAAACTTTTCTTTTCAGGAGTCCCTTATGGTCATTATACTGCCATGCCATCCAAAGAATGTCACATGGCAAAAGGTAAGAGTGATATACTGAAGTAACTTGATAGGATCATGGGATTCATGGGAGAATGTAACCGTTGGATTCATCTAAGATTTTAGGCATAACCACATCTTTATGTGATGGATGTCCTGGATTTATGTCGCACTTTATGTTAGTCCATTACTTAGCCAAGTATCAAAGCAGTAGGAGTGATTTAACATGACCTTCCAAATGCCTGCCTTTCATTTCTTTTGTGACTTTTAGGTAGATACTGCTTATTTCTGATCCTATTTCAAATCATCCTTTTCTTTTCCCCTAGTAGAATAATACGATGATATTTCATTTTATATTTGGGAATGATAGTTTAATACTATATATGGTTTTTACACTTGTGTACCCTGGCTCATCTGTATTTGCTTTGGGGCTTCTGGAGACTGGACTTGTTTCTAGCCTGCTGGGCTGGAACAATCCATCTTACTTATTTCCCATTTTACTTTCCTTTTCTATTACTCTTATATAGTTGTACACTGAAGAACAATTAAAATTTCAATTGGAAGTAATGTCTTGCAATGTTTTCAATCCTATAAAAGCATGAAACTGTCTTTTTTTTTTCAGGAATGACTTTTCGTCACATGTTATACCCTTCCTACAAGAGCAACCGCATCCCGACACCAGACACCATTGTCCAGGGCATGCAATACTTGAAGGCATCTATTAAAGCGATGTCAATCAAAGTGATTGAGGTAAAAGATATATTAGCAAGTGTATGATTGGCATTATATTCTTTATTATATATTTTCATTTGAGTTCTTAAATGATGGTTGTAGGTTCCTGGTGTCGAAGCTGATGATGTTATTGGCACACTAGCTGTCAGCAGTGTATCTGCAGGCTACAAGGTAATAAAACTTTCTACTGTGATTATTTGTGAACATTTTATTCATGAATTGTTCTTCAATATTCTCAATGGATATTTCATAAGTATCTCTCTTCATGAATCGTTCTCCAGTGCCGTCTTTAATCTTTCACATCATTTACAAAAGTTAGTACTTATAAACTGCTGAGGTGTTATAGATTCACTGAAACTGTTTTTATTTGTTTTGAAATGATTGAAATTTTGTAAAAGTTGATTCATAACTAACTTTTCCAATTGCACATGACAAAACTGAATGTCTGGAATTAAGTCATAGGTATGTTGAATTTTGTAACAAAAATGCAAGAAATACAGTGTAACTAAAATGTGATGCCGTTGCAGTGTGTTGGATATGATATCTTATTGTGTACTCTGGTCCTTATTTGAAGGTACGGATTGTCTCCCCTGATAAAGACTTCTTCCAAATTCTTTCACCTTCTTTACGTTTGCTGAGGATTGCTCCTCGTGGTTCTGGGTAAGTGTACTTGGTTTTTTTTGCCTTTCTTGCATGCTTACTGGAATACTCTAATAGCTAATCGTTTTTATTTGGACATGGAGGATGGTTTCATTTGGAGTTGAAGACTTTGTCAAGAGATATGGAGCACTGAAACCATCACAGTTTGTTGACGTTGTTGCGCTTTCTGGAGATAAAGCCGACAATATACCAGGTACCCTTTATTTCTATTGTGCCTTATGCTACACATCTGTTCTGACATCCATTCTTCTTTCAGACTAATTTTTGTTGGTAGCTGTGAAAACTATGAGAGAAAGGATACTAAACTTTGGTCTGCATTGGGTTGTATTTATTTATTTATTTCTCGCAATAAATTCTTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTATAGACATAGTGATTTCAGTTTGGTTCTTCTAGCTATTTATTTATTATTTATTATGTGCTGTAAGCGGACTGTTTGATAAAAACCTTAAATCAACTCATCAAATATGTTATGGACCCTATGAAGTCTACTGTCCCCCATCTTTTTAAGGGGAAAAACATGATTCTCATGTCTGAAAATTATTTCATGTTATGATATATGTTTGTACGTTACCAACACTTCACCAGTGCAATGCAGATTCGTAAGCTAATTTTCTATATATGGTAGTCTATCGACCAAGTTGTTTATGATGTGACCGGAACCATGTTCTTTTTCAGGAGTTGAAGGGATTGGAGATATTAATGCGGTAAAACTGATAACTAAGTTTGGTATGTTCTTCTCTTTAAAGTTTTTTTTTAGATTGTCGCCCTTGGTGCGAACCACTCGAGCTAAACACATTCTGTTCTAATAAAGGACTGCTTGTATACACTCAAACTACTCAAGATTGAAAAGTTCATGATTTCCCTGTGATCAATCTACCTGTTTAGTCTTGGTTATTAAGTTCTACTCCCCTAAAAAATATAAGTAGTTTTTAGCTTTCTCAAGTCTTTCCTAAATGTAAGTCATCCTAAACTTCTAGCCACCTTTTACTCCTCCCTTTCTTCCGTGAATAATTCACATTATTCAATGTGGTATAAGTAAAGGGTAACAAGGTCGTTTGATGTACTTTATTATCCCTGTACATAAATCTAGAATAACTTATATTTGGAATCCAAGTATTCTATGTTTTGAGTTAGGAAATAGTGGGCATATTAGCTGTCCTGATAATCCTGCAATTCTCCAAAAGTTATAACTTTGTCATTTTATTGGTACTCACATAGGTTCCTTGGAGAATCTGTTGAAATCTGTGGATGAAGTTGAGGAAGAACGAATTAAACAGGTATCATTCTTAATATTATACATTAGATGAGATATCCCCTCTTCGCATTTATCAGCATGCACTTATGCACAGAAATGCCAAGATACAGAAACTGGGTTGCATGACGCTTTTGTTTCACTAGAACAGCGCAATACAATGACCCCATTAAATGGCATTGATATTTTACCCTTTAGTATAATATGATTATCTTCTTGAATGTTGATTGCACATACTCTCTTGTCAAATATATCATTTTTTATCTTATGACTTCTCAAATGGTTGAGCAAATCATATTTGGTGTGGTCCTTTACAGGCTTTGATATCTCAATCTGAACAAGCAATGCTTTGCAAAAGCCTGGTAATCTTTTTTTTATGTTGCTCAAAAGTCCTTTCTATTGTCTTGATGAATCATGAAATGCAATCATCTTCCATATTATATTGTGAGATTCTATCTCAACCAGACTCTTCTCATTGAATTTACACTTCTTGTAGGCCACATTACGTTCTGACCTTCCATCCTATATGGTTCCTTTTAAGACATCGGATCTTGTGTTTCAGAAGCCAAAGGTAGCAATTGTAGCATCATATATTTATGAAAACAACTAAACCATTACTAAAGTTTGTCCCTCTGATTCCTGCTTACACTGTTATTCTTGCCCGCAATGCTTCTTCAGGATGATGGAACCAAATTCATAAAACTCTTGCGAGCTTTGGAAGCATATGCAGAAGGCTCGTCAGCAGACCTAATCATAAGAAGAGCCGCCTATCTTTGGAACAAACTTAACTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012164