BGIOSGA012330

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Revision as of 09:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012330| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012330, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA012330

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012330, complete gene.

LocusTag

OS03G0275900

Ensembl Transcript ID

BGIOSGA012330-TA

Ensembl Protein ID

BGIOSGA012330-PA

Length

4972

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10014577..10019548

Sequence Coding Region

10014577..10014984,10017553..10017669,10017805..10018230,10018319..10019548

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10014577..10019548 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10014577..10019548 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGAGGAAGCGAAGCCGAACCCTAACGCCGACGCGGCGCCTGCTGCAGCGGAGGCAGCAGCGTCTTCTCCGCCGCCGCTTTCGAGCTCGGAGTCGGCGGAGGGGAAGGATAAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGCGGGGGATTTGGTGGAGAAGCTGGTGGAGTTGGTGGAAGAGATCGCCGCCATCTCGGACTTCAGGAATGCATACCGGCGGCAGTTCTGCAACCTGTCGCGGCGGATCCGGCTGCTCGCGCCCATGCTGGAGGAGGCCAAGGAGGGGCCGCGGCCGCTGCCGGAGGTGTCGTATTCCGCTCTCCGGCGGCTCAGGGAGGCGCTCGCTGACTCCAGGGAGCTCCTCCGGCTCGGCGTCAGCGGTAGCAAGATCTCCCTGGTTCTTGAGAGAGAGAAAATAATGAAGTCTTTCCAGGATATTACTGCAAGGCTTGAACAAGCCTTAGGTTTAATCTCATTTGATGAACTTGACATATCAGATGAAGTAAGAGAACAGGTTGAATTGGTACATGCTCAGTTCAAAAGAGCTAAAGAACGATCTGATCCATCTGATGATGATCTCTTTAATGATTTGGTGTCCGTCTACAACTCAAGCACCAGTGCTAATGTTGACCCAGATATTCTCCAGAGGTTATCTGACAAGTTGCAGCTTGCCACTATATCAGACCTCAATCAAGAATCATTGATCTTGCACGAGATGGCTAGTGGCGGTGATCCTGGTGCCGTTGTTGAGAAGATGTCAATGCTGCTAAAAAGAATCAAGGATTTTGTGCAGAGTCGAGATCCTGAAATGGGAACCCCAGTAAATACGACAGAACTTTCGGGAAAAGACAACATGGCATCTCCGATTGTTCCGGATGATTTCCGTTGCCCCATATCGCTGGATTTAATGAAAGATCCAGTTATTGTTGCCACTGGACAGACTTATGAGCGAGGATGCATAGAGAGATGGTTGGAGGCTGGGCATGACACCTGTCCAAAGACACAGCAGAAGCTTCCCAATAAATCTCTAACCCCAAATTATGTCTTACGCAGCCTTATAGCTCAATGGTGTGAAGCAAATGGTATGGAGCCACCAAAACGTGCTGCTCAACATCATAATGCACCAGCATCATGTACCGCTGCTGAACATAGCAACGTCGTTGAGCTTCTTCAGAAATTATTGTCACAAAACCTAGAAGACCAGCGTGAGGCTGCAGGTATGCTTCGTCAGCTTGCCAAGCGCAGTCCTGAAAATCGTGCTTGTATAGGAGATGCTGGTGCTATTCCTATTCTTGTTAGCCTGCTATCTACAACTGATGTTAGCACTCAAGAGCATGTAGTTACTGCTCTCTTGAATCTTTCGATATATGAAGAGAACAAGGCAAGAATAATCACCTCTGGAGCTGTTCCTGGAGTAGTTCATGTGTTGAAGAGGGGAAGCATGGAGGCTCGGGAGAATTCAGCTGCCACACTGTTCAGTCTTTCACTAGTAGATGAGAACAAAATAACAATTGGGGCTTCTGGGGCAATTCCAGCTCTTGTGCTTCTGTTGAGTAATGGAAGTCAACGGGGTAAAAGGGATGCAGCTACAGCCCTATTTAACCTGTGTATCTATCAGGGCAACAAGGGCAAAGCTGTTAGAGCTGGATTGATCCCTGTACTATTAGGACTAGTCACTGAGACTGAAAGTGGTATGATGGATGAGGCCCTTGCTATATTGGCAATTCTCTCGAGCCATCCTGAGGGCAAGACTGCAATTAGTTCAGCCAACGCCATTCCAATGCTAGTTGGAGTAATCAGAAATGGATCAGCAAGGAACAAGGAAAATGCTGCTGCTGTTCTGGTGCATCTCTGCAATGGTGAACAGCAGCAACAGCATCTTGCTGAAGCGCAGGAGCAGGGAATTGTGACCCTGTTGGAGGAATTAGCCAAAAGTGGCACAGACAGAGGAAAGAGGAAAGCAATCCAGCTTCTTGAGCGAATGAATCGGTTTCTTATGCAGCAAAGTCAAGCCCAAGCCCAAGCAGAGGCCATGGCACAAGCTCATGCGCATGCACAGTCTCAAGCTCAGGTTCAGGCTCTTAACGAAGCTCAATCTCAGGTAGAGATGCAGGTGGAGCAATTGTTGCTTCCAACTACTTCACATCTTTCTGATAGACGAGACGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MDEEAKPNPNADAAPAAAEAAASSPPPLSSSESAEGKDKEEEKEEEEEEEAGDLVEKLVELVEEIAAISDFRNAYRRQFCNLSRRIRLLAPMLEEAKEGPRPLPEVSYSALRRLREALADSRELLRLGVSGSKISLVLEREKIMKSFQDITARLEQALGLISFDELDISDEVREQVELVHAQFKRAKERSDPSDDDLFNDLVSVYNSSTSANVDPDILQRLSDKLQLATISDLNQESLILHEMASGGDPGAVVEKMSMLLKRIKDFVQSRDPEMGTPVNTTELSGKDNMASPIVPDDFRCPISLDLMKDPVIVATGQTYERGCIERWLEAGHDTCPKTQQKLPNKSLTPNYVLRSLIAQWCEANGMEPPKRAAQHHNAPASCTAAEHSNVVELLQKLLSQNLEDQREAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSTTDVSTQEHVVTALLNLSIYEENKARIITSGAVPGVVHVLKRGSMEARENSAATLFSLSLVDENKITIGASGAIPALVLLLSNGSQRGKRDAATALFNLCIYQGNKGKAVRAGLIPVLLGLVTETESGMMDEALAILAILSSHPEGKTAISSANAIPMLVGVIRNGSARNKENAAAVLVHLCNGEQQQQHLAEAQEQGIVTLLEELAKSGTDRGKRKAIQLLERMNRFLMQQSQAQAQAEAMAQAHAHAQSQAQVQALNEAQSQVEMQVEQLLLPTTSHLSDRRDG</aaseq>

Gene Sequence

<dnaseqindica>1..408#2977..3093#3229..3654#3743..4972#ATGGACGAGGAAGCGAAGCCGAACCCTAACGCCGACGCGGCGCCTGCTGCAGCGGAGGCAGCAGCGTCTTCTCCGCCGCCGCTTTCGAGCTCGGAGTCGGCGGAGGGGAAGGATAAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGCGGGGGATTTGGTGGAGAAGCTGGTGGAGTTGGTGGAAGAGATCGCCGCCATCTCGGACTTCAGGAATGCATACCGGCGGCAGTTCTGCAACCTGTCGCGGCGGATCCGGCTGCTCGCGCCCATGCTGGAGGAGGCCAAGGAGGGGCCGCGGCCGCTGCCGGAGGTGTCGTATTCCGCTCTCCGGCGGCTCAGGGAGGCGCTCGCTGACTCCAGGGAGCTCCTCCGGCTCGGCGTCAGCGGTAGCAAGATCTCCCTGGTGCGTTTCTCGCTTGAGGCTCGTTGTTTTGTTGCCATATTTGGTCGTTAAAAGATTACATTTCTTCTGCTTATGGCCTTTCGAGTTTATTTAGGTTTTAATAGGAGAATTTGCCTCAAGAATTGGAGCGGATTTTAGTGCGTTCATACTCCAAACTTCGTATTAGCACTTCCAATTGTCCCCTGTGATATGACCATTTTAGATAACTCTTTGACATGATCTACTGTATCTCTACATTTTTAAAATATTTTGTTGTTTCTTAATTGTTATTTTGTGGTTGTGAAGTAAGCTCAAGCTTAATAATACATGCTGAAGGTTGGACCAGGTTTTGTTATACCTGGGTGTCAAATCAATGCCGGGCCAGAGCAGTTGATGCTGTTTAGCAACAAGCTTGTCAAAAACATTATCTCATTATATTTTTCCTTTTCGCTGGTGGGTCAGAGTGAAATCGGCCTCAACCATGGTATAGGAACTAATTCTGTCACATAAGTTGTAATGAGCTTAATTTCTGACGCAATTTTGTGCGCAGCTAGACTAAAATTCAATTGAAACTAGAGATGTATTTGATAAACAGTCTTGTTTCGATCTTTTATATTATTAGGAGAGGTCAGTAAGGATCCACTAAGTTTGTACTGGACACCAATAATTTGCCACGTTAATTGCAGAAAAAGAGAAATATCTGCACCGTTAGATTGTGGTTAGGTCAAGATTACAATGGGGTAGATTTATCATATAATTTTATACAATGTAGAGTTGCATCTATGGAAACAAACATGTATATGAAATTCTGCTCTTTTATAATCTATAGTTGCACACAAAATTGCACGGGAAAATCCGCTAGTGTATACAAGTGTATTTTGTATATATATATAATATAATAAATTATTTGATGGGCAATATTTTGTAGCATCATGGTTGGTTAGTTTTAAGGTTCCGCTCGGTGTTTTAGGTTCTCATTGCAAAAACATCTCTGTGGGGGATTGAAAAATTCTTTTCTTTTTTACTTTTCAGCAGATTTTTGCTGCATTTGAACGAATTTTCAGTGCATCCAAACAAGTTTCCTTTTTTTTACCAGATTCACTTCATACAGGATCTACTTGTAAAAATTTCGAATCAAAATTTCAAAGTCTGGTCCTACTAGGGCATTTATAGTATAGAAGCTCAATAAACTATATTTCCCTGATTTGTAAAGAAAGCTCACTGTGAAGTTACTGCACATTAACCCTGGTCCCACCAGGGCATTTATAGTATATAAGCTCAATAAACATCATTTTTTCTGACTTGTAAAGAAAACTCTGTGAAGTTACTGCACATTAACCCTGGTCCCACTAGGGCATATATTGAGTTACCATAAATATTAATTTCCATACCTGGGTTGCTCTTTGCAGCTGAAAAGAAAAACTGATTGCACTCGTGCATTTATCTTGTAACCTTCGTCAGAATGATGTGCTGTGTTCCCCCTCCCAGGATCGTTATCCTCGTCCCGGGAATATGGGGACAATCTTATCCCTGCCTTGTTAAAACCTTTCAAAAGTAGTGTCACTCATGAACCTGGGAGCTTTGGTGACATGTAACTACAAAGGAAAAAAGAAATGTACCAAGAAAAATGCATTTAATATGGATCTGTAGCATCGGACTTGTTCAAAAGAATAGCTCTTTACTTTATTCTGTACTGTTGCTCGTGGACTAACAGTTCTGTTACACAAAACATAATTGTGGTTATTACAATGAAGATGAACTATTCACAGAAGTGCTTTGTTCTACTTGAATTAAAAAAGAAGAGAAAAATCACATGCTGATTACATTTGACATTCCTATTAAAGTTCTTACGCAGATGATTAAGTGAAGAAATTCTCTTAGTAATCGCTAATGTAGAAGTTATACGTAGAGGTCTCATCGTCTAAATTTCTTCTGGGTTCTCATCAACTGTTCTTCTTCTTTTCCTTTTTGGAGTGCGAGCATCGCCTGCTGTGTTTTTTTGCCCAATGATCGGTACATTGGAACCTGCTCATGAAAAAAAAAAACTGAAATATAGTCTGGTACATGCACTGCTGACCTTGGCTATCATGGGCCACAAACACATGTGGTAAGGATAGTGTGGTTATTGGAAGGTATGAACAGGGAAAGATGCAAATTTCACATTTCTTGGGTGGATCTAAAATGGTAGTTTCTGGAGTTCCATTATTGGATGTTGTAACTGATTTACATCAACTTTTTTTTTTTCATATGGTCAGTTGCAGAATTGTGGTTGAAAATTTTACGAATGTAGGGGTCCCTATTGTAATGCATAACTACTACAAATATTAGCTTTTCAAACTACCAACAGTGTTTTTTGCAAAAAATTTCTATATGGAAGTGTTTTAAAAATCATATTAATCCATTTTTCAAAAAACAAATTAGTTAATACTTAATTAATCATGCAGTAGTACATATTTCGTTTTGCGTGCCGGGGAGGAGGGGTTCTCCTCCTCCTGAACGCAGCCTTAGTAAACACCGGACATTGAGGAATGCAACGTTTTTAGTAGACAGTCATGTGCATTTCCTAACCATAAGGGTTTGATTTTGCAGGTTCTTGAGAGAGAGAAAATAATGAAGTCTTTCCAGGATATTACTGCAAGGCTTGAACAAGCCTTAGGTTTAATCTCATTTGATGAACTTGACATATCAGATGAAGTAAGAGAACAGGTAGGCTAACATATTCATGAGTACTTTTTTTCCATTTAGTAAAAGAACTATTGGAGTGAGATATTTTTAGTATTTTTTTTATTTTGTTTTGTTCAATTTTGCAAACTTGTTAACATGTGTGTGGCTATTGTGCAGGTTGAATTGGTACATGCTCAGTTCAAAAGAGCTAAAGAACGATCTGATCCATCTGATGATGATCTCTTTAATGATTTGGTGTCCGTCTACAACTCAAGCACCAGTGCTAATGTTGACCCAGATATTCTCCAGAGGTTATCTGACAAGTTGCAGCTTGCCACTATATCAGACCTCAATCAAGAATCATTGATCTTGCACGAGATGGCTAGTGGCGGTGATCCTGGTGCCGTTGTTGAGAAGATGTCAATGCTGCTAAAAAGAATCAAGGATTTTGTGCAGAGTCGAGATCCTGAAATGGGAACCCCAGTAAATACGACAGAACTTTCGGGAAAAGACAACATGGCATCTCCGATTGTTCCGGATGATTTCCGTTGCCCCATATCGCTGGATTTAATGAAAGATCCAGTTATTGTTGCCACTGGACAGGTAGTTGATTAACCTATGTCTACTTTCAATACGCATGCCTCCCATTTGTATTTGGACTTACAATAATTCCTTCAATATGCACATGCAGACTTATGAGCGAGGATGCATAGAGAGATGGTTGGAGGCTGGGCATGACACCTGTCCAAAGACACAGCAGAAGCTTCCCAATAAATCTCTAACCCCAAATTATGTCTTACGCAGCCTTATAGCTCAATGGTGTGAAGCAAATGGTATGGAGCCACCAAAACGTGCTGCTCAACATCATAATGCACCAGCATCATGTACCGCTGCTGAACATAGCAACGTCGTTGAGCTTCTTCAGAAATTATTGTCACAAAACCTAGAAGACCAGCGTGAGGCTGCAGGTATGCTTCGTCAGCTTGCCAAGCGCAGTCCTGAAAATCGTGCTTGTATAGGAGATGCTGGTGCTATTCCTATTCTTGTTAGCCTGCTATCTACAACTGATGTTAGCACTCAAGAGCATGTAGTTACTGCTCTCTTGAATCTTTCGATATATGAAGAGAACAAGGCAAGAATAATCACCTCTGGAGCTGTTCCTGGAGTAGTTCATGTGTTGAAGAGGGGAAGCATGGAGGCTCGGGAGAATTCAGCTGCCACACTGTTCAGTCTTTCACTAGTAGATGAGAACAAAATAACAATTGGGGCTTCTGGGGCAATTCCAGCTCTTGTGCTTCTGTTGAGTAATGGAAGTCAACGGGGTAAAAGGGATGCAGCTACAGCCCTATTTAACCTGTGTATCTATCAGGGCAACAAGGGCAAAGCTGTTAGAGCTGGATTGATCCCTGTACTATTAGGACTAGTCACTGAGACTGAAAGTGGTATGATGGATGAGGCCCTTGCTATATTGGCAATTCTCTCGAGCCATCCTGAGGGCAAGACTGCAATTAGTTCAGCCAACGCCATTCCAATGCTAGTTGGAGTAATCAGAAATGGATCAGCAAGGAACAAGGAAAATGCTGCTGCTGTTCTGGTGCATCTCTGCAATGGTGAACAGCAGCAACAGCATCTTGCTGAAGCGCAGGAGCAGGGAATTGTGACCCTGTTGGAGGAATTAGCCAAAAGTGGCACAGACAGAGGAAAGAGGAAAGCAATCCAGCTTCTTGAGCGAATGAATCGGTTTCTTATGCAGCAAAGTCAAGCCCAAGCCCAAGCAGAGGCCATGGCACAAGCTCATGCGCATGCACAGTCTCAAGCTCAGGTTCAGGCTCTTAACGAAGCTCAATCTCAGGTAGAGATGCAGGTGGAGCAATTGTTGCTTCCAACTACTTCACATCTTTCTGATAGACGAGACGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012330