BGIOSGA012666

From RiceWiki
Revision as of 09:50, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012666| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012666, complete gene.| tag = OsI_116...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012666

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012666, complete gene.

LocusTag

OsI_11664

Ensembl Transcript ID

BGIOSGA012666-TA

Ensembl Protein ID

BGIOSGA012666-PA

Length

5894

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15605331..15611224

Sequence Coding Region

15605331..15605477,15606493..15606796,15607920..15608298,15609272..15609407,15610667..15611224

Genome Context

<gbrowseImage1> name=IndicaChromosome03:15605331..15611224 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:15605331..15611224 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGTGGCAGAGGAAAACGGCGACGGCGGCAGCAGCGGAAGAGGAACACGACGGCGGCGGCAGAGGAAGAGGAACACGGCAGCGGCGGCGGCAGCGGTAGAGGAAAACGAACACAGCGGCGGCGAAAAGCAACCAGCGCTGAGGTCAGAGGAGTGCAGGAGAGAACGAGCGGAAGCTCTAAAGGGGCAAGTGCGCCGCAAGCTGTTGAAGGCCACGAGCCGCATTAGCAGCGTGGCCGAGATGGTGGTGCTAGTCGACACGCTGGAACGCCTCGGCATAGACAACCACTTCCGCCACGAGATCGCGGCGATGCTACACCGTGTGCACAGCGAGGAGCACGGCGGCGGCGGCGGTGCTGCCGGCTCCGATGTCGCCGACGACGACCTTCACGTTACTTCCCTCCGATTCCGGCTGCTTCGCCAGCACGGATTGGGGATATCTGCAGATGTATTCGACAAGTTCAGAGACAACGGGGGCAGTTTCAGAGCAAGCCTAAGCAGTGACGCAAGGGGTCTTCTAAGCCTGTACAACGCGGCTCACCTGGCCATGCCCGGCGAGGAGGTGCTCGACGACGCCATCGCGTTCTCGAGGCGCCACCTACGGTCCATGAAAACCGCAGGCAAGCTGAGGTCGCCGATGGCCGAGCAGGTCTCCCGCGCCCTCGACATCCCTCTCCCGCGGACGCCCAGGCGGCTGGAGGCGATGCGCTACATCCACGAGTACGGCGATGAGCCGGGTTTTGACGGCGTGGTGCTGGAGCTCGCGAGGCTGGACTTTGAGCTCGTGAAGTCTCTTCACCTAAGGGAGCTCAAGGCCCTCACCCTATGGGACAACGGAGCAGTTTCTCTTCTACCAGAATATATGCATGCATATTACATAAAGTTGCTAAGCAACTTTGACGAGATGGAGAATAGCTTAGAACCAAATGAGAAACACCGTGTGTCTTACGCCATAACTATGTACAAGCAGTTGTCTGAATACTACCTCCAGGAGGCCCGATGGTCGAGCCACAGGTACCTGCCGAGCTTCGCGGAGCACCTGTACGTGTCCAGCATCTCGTCGGGCATCCCGGCGCTGGCACCGGCGGTGCTGATGGGCGTGCACGACGGCGACGGCGTGGCGACCAAGGAGGCGTTGGAGTGGGCGTGCGCCATCCCGGACCTGCTCCTCGCCAGCGGCGAGGTGGGCCGCCTCCTCAACGACATCGCCGCCTGGAAGGTGGGGAAGAACAGGAAGGACGTGCAGAGCCTCGTGGAGACCTACATGACGGAGCACGGCGCGGGCGGGGACGCGGCCGTGGCGGCGGTGGCGGCGGCGTCGGAGCGCGCGTGGAGGCGGATCAACCACGCGTGCGTGGAGGCGGTGGAACCCGCGCTGCTGCCGGCCGCGCAGCTGCTGGTGAACCTGACGAGCACCATGGAGGTGGTGTACCTCGGCGGCAAGGACGGCTACACCTCCGGCTCCGGGCTCAAGGGGGTCATCACCGATTTCTTACTCGGCCCAGTCCATGACGATTAG</cdnaseq>

Protein Sequence

<aaseq>MAAVAEENGDGGSSGRGTRRRRQRKRNTAAAAAAVEENEHSGGEKQPALRSEECRRERAEALKGQVRRKLLKATSRISSVAEMVVLVDTLERLGIDNHFRHEIAAMLHRVHSEEHGGGGGAAGSDVADDDLHVTSLRFRLLRQHGLGISADVFDKFRDNGGSFRASLSSDARGLLSLYNAAHLAMPGEEVLDDAIAFSRRHLRSMKTAGKLRSPMAEQVSRALDIPLPRTPRRLEAMRYIHEYGDEPGFDGVVLELARLDFELVKSLHLRELKALTLWDNGAVSLLPEYMHAYYIKLLSNFDEMENSLEPNEKHRVSYAITMYKQLSEYYLQEARWSSHRYLPSFAEHLYVSSISSGIPALAPAVLMGVHDGDGVATKEALEWACAIPDLLLASGEVGRLLNDIAAWKVGKNRKDVQSLVETYMTEHGAGGDAAVAAVAAASERAWRRINHACVEAVEPALLPAAQLLVNLTSTMEVVYLGGKDGYTSGSGLKGVITDFLLGPVHDD</aaseq>

Gene Sequence

<dnaseqindica>1..147#1163..1466#2590..2968#3942..4077#5337..5894#ATGGCGGCGGTGGCAGAGGAAAACGGCGACGGCGGCAGCAGCGGAAGAGGAACACGACGGCGGCGGCAGAGGAAGAGGAACACGGCAGCGGCGGCGGCAGCGGTAGAGGAAAACGAACACAGCGGCGGCGAAAAGCAACCAGCGCTGGTGCAACCAAAATTCTAGGGTTCGAGCTAGCTGACCATCAACTCTTCCCGATCCATCCCTCCAGAACCATCCATCGCATGCAAAGTTACTCTTTTACCCTTCTAACTCTCTTCTCTCTGCGGTACCGTCTCAGGGACAATTTTGATACCTCGTGGTACCACGCAATACCAGCCGTTGGATCTGACCAGATCCAACGGCTAGCATTTGGTACCGCACGGTACAGCTGGACCGTAAAAAAACTCAAAGAAAAATTAAATCCGCCACATGCATGCATGTACGAGGTTCGATCGTATGCTAGGTGACCCGTAGGCCATAGCTACACGGGTCCTAGAGGGGTGCTCGTCTATAAATAGAGAAGATGGGAGAGGTACTGACCATATCCAATTAGTAGCAAGCTACTCTAATTGACAACTTCTGTAAACTAGCGGTCGCGAACGAGCTCGATCAACCAACGATAACATGTCTGGGAGCAGTGTTCTCGCGACGGAGGTGCTTGCTGTTAGTGGAGGCTCCTCGCCGTTGGCTGCCGCTGCCGTCGTCACCACAGGCCCATTGTTGCAAGGTTTTGCGCCGTCCGTGTGGGGCGACTTCTTCATCACCTACGCCCCTTCCAACTCACAGGCATGCAGATTAAACAGTACTGTGCATATATATATACTTAGGTCTTGTTTAAGGAGCTTCTAGCATCTGCAGTTTGTATCATAATCTTCAACTCTCTTAAATATTCTCGTCCTACTTTAAATATAGTTATATAGAATCCAGAAAATAAGGTACAAACGAAAACCAGGGTTTACCTGGAAAACCATTTTTACGTACGGTTCCTCGTAAGCTAACTATTACACAGATCGACCAGCTGTTTATCAGAAATGGGCAGCCTTAGACATAAATAGTGAAATAGAACCATACACACACATGCATACCGTATTTATTTACGTGTGTGTGCTTTGCTTAATTGTACAGGGCAGGGGCTTAAATTAATTATCTGTGTACTCTCGATCATGTGCGTGTGGTGCAGAGGTCAGAGGAGTGCAGGAGAGAACGAGCGGAAGCTCTAAAGGGGCAAGTGCGCCGCAAGCTGTTGAAGGCCACGAGCCGCATTAGCAGCGTGGCCGAGATGGTGGTGCTAGTCGACACGCTGGAACGCCTCGGCATAGACAACCACTTCCGCCACGAGATCGCGGCGATGCTACACCGTGTGCACAGCGAGGAGCACGGCGGCGGCGGCGGTGCTGCCGGCTCCGATGTCGCCGACGACGACCTTCACGTTACTTCCCTCCGATTCCGGCTGCTTCGCCAGCACGGATTGGGGATATCTGCAGGTACAGTTAGGCTGTGTTCTTTCCCCCATTTTTCCAACCCATCACTCCCGTTTTACGCGTGCACGCTTTTTAAATTGCTAAACGACGTGATTTATGCAAAAACTTTCTATATGAAAGTTGCTTAAAAAAATTATATTAATCCATTTTTTTAAAAAAATAATTAATACTTAATTAATCATACAATAAAATAAACTTTGTTTTGCGTGTCAGGGACAACCCCTCCTCCGAACACAGCCTTAGGGTGGTAATGGACCCAACATTTTGACCTACAAAATGTGAGGTCAAAATGAGTCTAAAATGAGTTGGGCTAAAATTTAGTATTTTTTTATGTTAAAAATATTTAAGAGTTGAGATGGGTTGTGAAAAAACCCACGAGTCTTGACCCCACCCCTAGGTAATCATATCTGCGTATCTTCATAATTAAAAACTGATTAATTAAACATTTCAAGGCAACTCCCACGTAAAAACATTGATTAGGTGGATAATGTAAGTGGGAATTTAAGTTTAGTTTTTTTTCCCAAAATTGATTGGTAGTTTTTGTTAATATATTTCGAAAAAATTGAAATACATTTTTTTAAATACGTTTACTAATTATATTTTGGAAAACTAAAGCTGGCTGTTAGTTTTTATATATTTGTAAATATATAAAAAAAATAACATGATCCCCACCAAAATACTTTGAATAATAACATGATCCCCACCAAAATACTTTGAATAACATGATCCCCACTTCAAAATTTATTTAACACTCTATTAATATTTAATGCTAAAATTTAAAATTTAGTAATTAGCTAGTTATGAGACTAAATTATTTGTAAGAGTTGGAATTTTATTAATTTAATTCTAAATTTTAAGATTAATACTAGTAGTTAGACAGAGAGTTACTTTTTTTTTGCAATTCAAAAAACTACCCGTGTATTCAACATATTATTGAACTTATACTACCTAAAATTATATCGATAATAATACAGCTACCGCAAAGCACAGGTTAACGACTAGCTGGTATATATTTAATTTGAACTCTGAATATATACATATACACACACATACATTTTACTGATATGCTCACAACAAAATATATACATTTTACTGATAGAAAATATTAATTCATGCATTGCAAAAGATGTATTCGACAAGTTCAGAGACAACGGGGGCAGTTTCAGAGCAAGCCTAAGCAGTGACGCAAGGGGTCTTCTAAGCCTGTACAACGCGGCTCACCTGGCCATGCCCGGCGAGGAGGTGCTCGACGACGCCATCGCGTTCTCGAGGCGCCACCTACGGTCCATGAAAACCGCAGGCAAGCTGAGGTCGCCGATGGCCGAGCAGGTCTCCCGCGCCCTCGACATCCCTCTCCCGCGGACGCCCAGGCGGCTGGAGGCGATGCGCTACATCCACGAGTACGGCGATGAGCCGGGTTTTGACGGCGTGGTGCTGGAGCTCGCGAGGCTGGACTTTGAGCTCGTGAAGTCTCTTCACCTAAGGGAGCTCAAGGCCCTCACCCTGTAAGTTTTCACGTTTTCGCTTCCTGTGATCTCAGCTGCTTACTTAAATATCCCTGCTAAAGAAGTACAACTATTTTTTTTCTTCATATAGCTAGCAAGCTGTTGTTTGTGTTTTCCGTTAATTGACTGACAGCCTACTCTCAAATATATATGTACCCCTCTCTGTTGTGAACTCCATTTTGTCTAAATTAATATTTGACTGCACCTTTGCCCCGTCTAGCTAGCTAAAAACAATTAAATTTTCAGCTTTTCTGTTTATCAGCCATGGTTTTCTTTTCTTATTTATCTGTCACCTGGAGTAGCTTGCAAATTGCTTATCCTAAACTTGCAGAATTCACAAGTTACAACTTGAAGTATGTCGCATTAGACCAACTTAAGCTAGTTTCGTTTCGTTCGTATATTTTTTTTTGGATTACTCTAGATATGTTTTTATGCTTTATTTTGCCTTCTCTTGTATTGGCATGTGTCAACATCAATGTATAACTTCCAATTCCATGATAGAGCATAGCTTGCTTTGCCACTATTGAAAAAATAGCTAGCGATACTGTTGTTAGATGTTGTTCTAATGAATGAGAAAAAAAATCAACCATTTTGGCAAATAAGTGTCCCAAACTTTTCCAGTATAAACAAATGGATTCAAGCATGGTCAATTGATTGGTACATACAGGTGGTGGAAAGACTTTTACGACAACATAAAGCTGAGCTACACCCGAGACCGTATAGCAGAGGTCTTCTTCTAGGTTAGCGGAGTGTACTACGAGGAGGAATACTCTCGCGCACGTATTATGCTTGCTAAGGTTTTCGGATTGATAACCCTAATGGATGACACTTATGATGTCCAAGCCACCTTGGACGAGTGTTGTAGGTTCAATGAAGCAATACAGAGGTAAAAATCAGTAATGACCTATTTGTTTATTTTGTCAAAATGAACTATCTGAGCTGAGCTAACTACTCAATCCTTATAAATATGCAGATGGGACAACGGAGCAGTTTCTCTTCTACCAGAATATATGCATGCATATTACATAAAGTTGCTAAGCAACTTTGACGAGATGGAGAATAGCTTAGAACCAAATGAGAAACACCGTGTGTCTTACGCCATAACTATGGTAAAATCTTTTTACATATACTGACGTATTTTTAGCTTGCCTGTAAAAGGAAAGGGGTGTCCATGAAAATATTTTTTATAGTGATCCAGAGTCAAGATACTTAAATATAGAACTAGTCAATTATTAAGAGAAGAAGATACACCCTAGATAATATAGAGAGTATCGATCGATCTATTATGAGAGGAGCACCGAATCATATATAACTTCTAATTATAAATTTAGAATGAAACTGGTTAGATACTTAAATAGAGAGTCAAGATATATAGATATACCTTAGTGTATACTGACTTTATAAATTTATTATTTGTCAAGAAAAGTAAAAATAACACTGCTAATTATGTGACAAAATTTCTGAATTTTAACATTTTTTGGCTGTCAAGCAATAATCACAATAATCAACAAAACTATTAGGGCCAGAGTGGTATTCAATCGGTTGGAGAAAATATTTTTAGGCCATGAATATGACTTGATAATTATTAATTTCATTTCAAAAATTTAAAATTATTAGACTATAAAAGCCTATAGTTGCGACTCCATATTCATTCTAACTTTGTATTTGACAATTCCGAATTTTAGAATTAACTTGTCAATAACAAGGAAAAATTATGTACGTCTCCATGATAAGTAGAGCTTTGTGTTCGTTGTTGTAAACCTCAAAAGTATCGAAAAATATACTCCCTTGTTGTTTGTTAGTTTAGTTAATGTTTTGGATATTAATGTTGGCGTAGTCACACATGTTTCATCACAATTTTTATCCAACTACGGAGTATATATTATAAAATTAATAAAACTATAGCTGCATGAAAGAAATTTTCAAATAATTTTGACATATTAATGTCATTTTATATATGTTAAGTTGTAATGTTTTGTATGTACTAAGGATTTAACATATTGACATTTGAATGCATCGTGTTATATACAGAACGTTATATTATGAGACATGAGCCAAAAATAGTTGTCTTATATTTAGAAATAGAGAGAGAGTATCTATTTGACGAAAACATATATAGTTCGTAGTCTAAAATTTGAAATATAAAAGTATATATACACTTTACCCTGACGTACGTTCACGTCAGGTGTAATTTTCCCCAAGGACACACGATCAGTCAATTTTATTTTTCCTCAACAAGCTAGTTACTATGACGCGACATTATTTTCCTTGATAAATAAAATATACTGCAGTAAAAAAAATATTCTATTCACAATAAACAGAGTTCAAATAACTTATATTATCTTCATATGCCTGCATACATGTACAGTACAAGCAGTTGTCTGAATACTACCTCCAGGAGGCCCGATGGTCGAGCCACAGGTACCTGCCGAGCTTCGCGGAGCACCTGTACGTGTCCAGCATCTCGTCGGGCATCCCGGCGCTGGCACCGGCGGTGCTGATGGGCGTGCACGACGGCGACGGCGTGGCGACCAAGGAGGCGTTGGAGTGGGCGTGCGCCATCCCGGACCTGCTCCTCGCCAGCGGCGAGGTGGGCCGCCTCCTCAACGACATCGCCGCCTGGAAGGTGGGGAAGAACAGGAAGGACGTGCAGAGCCTCGTGGAGACCTACATGACGGAGCACGGCGCGGGCGGGGACGCGGCCGTGGCGGCGGTGGCGGCGGCGTCGGAGCGCGCGTGGAGGCGGATCAACCACGCGTGCGTGGAGGCGGTGGAACCCGCGCTGCTGCCGGCCGCGCAGCTGCTGGTGAACCTGACGAGCACCATGGAGGTGGTGTACCTCGGCGGCAAGGACGGCTACACCTCCGGCTCCGGGCTCAAGGGGGTCATCACCGATTTCTTACTCGGCCCAGTCCATGACGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012666