BGIOSGA012683

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Revision as of 09:50, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012683| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012683, complete gene.| tag = OsI_116...")
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Gene Name

BGIOSGA012683

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012683, complete gene.

LocusTag

OsI_11693

Ensembl Transcript ID

BGIOSGA012683-TA

Ensembl Protein ID

BGIOSGA012683-PA

Length

6407

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15876584..15882990

Sequence Coding Region

15876584..15876824,15876932..15877122,15877853..15878123,15879025..15879062,15879870..15880010
,15882811..15882990

Genome Context

<gbrowseImage1> name=IndicaChromosome03:15876584..15882990 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:15876584..15882990 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCCTGCTCTTTCTTCTCCTCTGCACGAATTCCGCCACCGCCGACGTCGCCGGCAGCAATGGCGGCTGCGGCGGCTTCAAGCGCATGTTCAGCTTCGGCGACTCCATCACCGACGCCGGCAACCTCGCGACCATCAGCCCTCCCGACGCCTCCTTCAACAGGCTCCCCTACGGCGAGACCTTCTTCGGCCACCCCACCGGCCGCTTCTGCGACGGCAGGCTCATCGTCGACTTCCTAGCGGATGATCTGGGGCTGCCGTTCCTGACGCCGTTCCTCCGGGCGAAGTCGCCGGAGGACTTCCGGCAGGGGGCCAACTTCGCGGTGGCCGGAGCGACGGCGCTGAGCCAGGACTTCTTCAAGCAGATGGGGCTCAACCTCACCATCATACCTCCATTCTCGCTGGACGTGCAGCTCGAGTGGTTCAAGAGCGTTTTGATCGACCTTGGTGCCAAGACCATACTGGTTCCAGGGATCCCGCCAATGGGCTGCATTCCGAGGTTTCTCAACTTGCTCCCTAGCAAGAACCACAATGACTATGACAAGCTTGGATGTCTGAAGTGGCTGAACGACTTCTCTCAGTACCACAATCGTGCTCTCAAACAAATGTTACAGAGGATTCATCATGATCCTACCGTCACCCTAATCTATGCCGACTACTATGGAGCAATGTTGAAGATAGTTCGAAGCCCTCAGAACAATGGGTTCACGAAGGAGAGCGTTCTGAGGGCGTGCTGTGGGCTGTACTGTGATGGAACAAGCCATGCAGCCATTGATCCTATGTATGGCATGGATGAAAGCAACGGCAAAGACTGCCTTTGGCCTCAAAGGCAGAAGATGCAGACCCATATGCTACAAACACTTGCATGTACATGTAGGCAGGTGTTAGAGGTGGACCTAGCATTTACCGGGCTAGAAGGTGACGCCAACAAAAATGACGAGGCCCGCAATGTTTATCAAGTTGAGACCAGATCGAAGAGTCGAACGCCAATGACCCTCTTAAGCTGCACAAAGAACAGTATAAACCCGAGAACGGAAGAGAAACGGGAGAGACCTAACTAG</cdnaseq>

Protein Sequence

<aaseq>MLLLFLLLCTNSATADVAGSNGGCGGFKRMFSFGDSITDAGNLATISPPDASFNRLPYGETFFGHPTGRFCDGRLIVDFLADDLGLPFLTPFLRAKSPEDFRQGANFAVAGATALSQDFFKQMGLNLTIIPPFSLDVQLEWFKSVLIDLGAKTILVPGIPPMGCIPRFLNLLPSKNHNDYDKLGCLKWLNDFSQYHNRALKQMLQRIHHDPTVTLIYADYYGAMLKIVRSPQNNGFTKESVLRACCGLYCDGTSHAAIDPMYGMDESNGKDCLWPQRQKMQTHMLQTLACTCRQVLEVDLAFTGLEGDANKNDEARNVYQVETRSKSRTPMTLLSCTKNSINPRTEEKRERPN</aaseq>

Gene Sequence

<dnaseqindica>1..241#349..539#1270..1540#2442..2479#3287..3427#6228..6407#ATGCTCCTGCTCTTTCTTCTCCTCTGCACGAATTCCGCCACCGCCGACGTCGCCGGCAGCAATGGCGGCTGCGGCGGCTTCAAGCGCATGTTCAGCTTCGGCGACTCCATCACCGACGCCGGCAACCTCGCGACCATCAGCCCTCCCGACGCCTCCTTCAACAGGCTCCCCTACGGCGAGACCTTCTTCGGCCACCCCACCGGCCGCTTCTGCGACGGCAGGCTCATCGTCGACTTCCTAGGTAATTGAGCACGTCGTCGTCGTCGCCGGCGATCGACGGCAATAATGCATGTAGCAGTCTCACACACGCTCGATCGCGATGAATATAATGCGTTGGATGATATGCAGCGGATGATCTGGGGCTGCCGTTCCTGACGCCGTTCCTCCGGGCGAAGTCGCCGGAGGACTTCCGGCAGGGGGCCAACTTCGCGGTGGCCGGAGCGACGGCGCTGAGCCAGGACTTCTTCAAGCAGATGGGGCTCAACCTCACCATCATACCTCCATTCTCGCTGGACGTGCAGCTCGAGTGGTTCAAGAGCGTGCTTAATTCTCTTGGCTCTACAGACCAAGGTATAATACCTTAATACGTACGAGAAATTTGATAGTTCAACGCTTTCTTTGTCGTTAAAGTGTTAAACTGCTTTAATTAACACACGTGAGGATTGATATGTAGGAGTCTATGACCGTCTGAGTGAATAAAAATAGACCAAGACGTTAAATAATAGAAGTGAATAAAACTGTCAAATTATCAAATCTCTCCCGTAATACAAAGTCGATTTATTTATACTAGGGCCATGTCCATGCAAGATAATTGAGCTATTACCACCAAATTATTAAAAAAAATAATTCGTAGCAATATATTGTACTATTGCAATGATAATTTTGTTGTTGCAAATAATTATATTTTATTGCAACGATTTACTATCGTTGTTTTATTTAGTACTTTTCTTGCAATAGAAAATAAGATATCACCACAAAAAATGTTACTGTTGCAAAAAAACATGTTCTATCACATAATTTTAATTTTTGTGGCAATTTATATAGTACACAGATGTGAAGTTACTTTTGGTACTATTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGATCAAACCCTTAGTGCCACTAGTGATTTTAAAGATTGAAAATGCCACCAAGGTACTAACTACATTCATAACAAAAGTATACTTAACTACGATTTACCACTGATGTTTTATCATTTTATTATGTATGGATGAACAGGTTTTGATCGACCTTGGTGCCAAGACCATACTGGTTCCAGGGATCCCGCCAATGGGCTGCATTCCGAGGTTTCTCAACTTGCTCCCTAGCAAGAACCACAATGACTATGACAAGCTTGGATGTCTGAAGTGGCTGAACGACTTCTCTCAGTACCACAATCGTGCTCTCAAACAAATGTTACAGAGGATTCATCATGATCCTACCGTCACCCTAATCTATGCCGACTACTATGGAGCAATGTTGAAGATAGTTCGAAGCCCTCAGAACAATGGTTCGTGTTTTTTTTCTATTTTACCCAATCCGTTCTAAAATATAGCAATTTACCTATTTCCTCCATCCTATATTGATCATTCCCTATAAGATTTTTGAGGTCTTCTCAAATTGATCATCAATTTGAAGTGGTGTCTAAATATTTATTCGTCTAGAAGTAAATGACATTGTTGCATGTCTATTTGTTTATCTGTGCGGAATAAATGACATTGTTGTATGTCTACTCGTTTATATGTGCATGAGTAAATAACATCATTGCATACCTCGCATACATTCAATTGCATGTTTGCATGTCCATATGCATATGAAATACAACACCTTGATCGATGATGTTTAGTTTAAGAAGGAATAATGTTGTGCGGTCTTAATCTTGGTGCCATTTGTAAATATGATGATTATCAAATTGGGAAGGAGGAAGTAGTACTGAATTAGACGTAACATAGTATTATGTTTTTCTTATTCTACCCCCTTCATCTCAAAATATAATAATCCATATTACTATAGATTAGATATAACATAGTACTGTGAATCTGAAGTACCGTGTGTTGTGTCTAATTCAATATTAGATTGCTAATATTTTAGGAGAGAGGGAGTAGTAAATGTAATTTCAAAATGTTTAGAATCAGGGGCAAGATACCGGCATGGGGTAGCTAGGGCTTGAGCCCCATGCCTGGCTTCATGATCCCCATTATAATCTTGAAAAATATCATGTAATTTCTAAAAGTATTTGAACTCTCATTAGTTCAGCCCTACGCGTGTAGATTTTCTGGCTCCGCCACTGTTTAGGATGATAACTGTTGGGTAAAATTTCTTTTTTTTCCCCCTTATCATTCGATCCTTGTGTCTTCTTTGACAGGATTTTGGTTCTGATTTTTTTTTCCTTGTGGCTGTTTAATTTGCAGGGTTCACGAAGGAGAGCGTTCTGAGGGCGTGCTGTGGGGTGGGTGGGGCCTACAAAGCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTGTGACTGGGAGAGAGGTAGGAACGACTGTGTGACTTTGTGAGTGACGACAGACACAACGGCAAACTTTGCCGTTGCTTTCCTATATGCCACCCAGGGATAAATGGCAGCATAGCTTGCCTCACCAGTGATTATTAGCACCTACTTCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGCCCACATTCATTTAAATGTTAATGAATCTAGACATATGTATGTGTTTAAATTCATTAACATCTATATATATAGACAATGCTAGAAAGTCTTACATTATGAAACGGAGGGAGTAATTAATTAATAGAACCATGTGTTTCTTTCCAAGGAAAAAGAATCAACAAACAAAATCAGCGGTGCAGAGTGCGCAGAACAAAAGAGATAAACTGCTTTAACTGAACATGGATTCTTTTAATTGAACAATATGAACAAGAGCTTAAAAATAAATAAAATTATAGGCTTTAAAAGAATAAAAGTGGAAGGTACAATATGATGACAAATCAAATAAAGATAATTTTCTTGCATCACTTATCTGATATGGTGGTAATTAAGATTATTTGGCTGCTCCATCTATGAAGGATTTTTTTTTCTTTTCATGTTGTTCCTATATCAATGGAGATTAGATGTCCATTCATATTGCTGATGTAAAAATGCGAGAGTAAGCGTATTGTGTGTTCCTCGTGCTTTGATTTATTTTACTAGAGAGAAACATCTAATTTTGTCAATTACTTAGCTGTACTGTGATGGAACAAGCCATGCAGCCATTGATCCTATGTATGGCATGGATGAAAGCAACGGCAAAGACTGCCTTTGGCCTCAAAGGCAGAAGATGCAGACCCATATGCTACAAACACTTGCATGTACATGTAGGCAGGTATATATGCATCCATCCCTTTTACGAAATTACGTTAACCAAACAAGTTTTTAGAATTAACAGACACTTACGATATTAGTGTTAGTTTTTCTTAATAAATTGGTAAGCATCTCCAGCAAAGCCCAAAAAATAAAAGCAGAGCCCCTACTTTAGACCCCATAATAGAAAGGCTGTCAAATTCCCTCCCGTAGCCCCTAGGCCTGGGGGCTCTACAACACAGCCCCTATCAAACTTTTTTTTCTTTTTGGTGCGAGGAATGTTTACACGACGCACGCTCCCTCCCGCGCGATCACAGCACGCCGTCAGTCGTCTTGCGAGTGACTCTACTCTGATCCAGCCATCGCCATGATACGGTATTGGTCACCTGTATGAATGCACGAATGCATGGATGTTTCTGCATATCGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTCAAATAATTGATTTCAAAAAGGCTTAAAATAATGTAAAACTTATAATTCATAAAATATTTGCAGAACTCTAAATTCAATATGAGTAAAATACACGACTGATTCTTAAACCTGACCGAGTGTCATCTAGATTTATGAACATGTAAATGTGTATTGGGTTCTCAATCTTGATTTAATATATCATCGAGGTCCAAAATACAGATGATACAGCTCGAGCACTCATTCTCTCGAATTGGCTCCCACCACTCCTGTAACAATTTTTCTTATGTGTAATTTAAAGTAAATTACACTTTGCGCTGGATAGATTAACAATGTTTTTTTGCTTTGCATCGGGTTTGGCCCATACTTTTGCATTGCACCGAGGATAGGAAATTAACTTTCACATAACACCACCTTTCAATCGTCCGCCACACGACCGCTGTGGGCCGCTCTCTGGAGGGAAGTCGAGGGAGAGAAAGTGAGCTTCCACGAGAGAGAGAGAGAGATCGAGTGAGAGAGAGAGAGAGAGAGAGTGTGAGCTTCCAGGAGTATGAGGAGAGTTATATGAAATGCAAGGTTGACGATCGGGACATCTTGCATATTGGTCCTCGCAAGATAAGAGTCAACCCGGTTTGTGACTGCAGTTCTATCTTACGATAGTTTTGTCATTTAATTTGGTATTAGAATATGCTAATATTTATTTAAACTTGTAGGTTCGCGGTCAAGCCAACCTCACTGATAGAACAATCCAGTTGTTGGGATATAAGATAATCCCTAGAATAAAATAAAAAGCGAGCAACAAGACTATGCGGGAGCACTATTATTATATTGTGCCTTGTGTTATTTCTAGGACCTACTCCCTCCGTCAAAAAAAAAATCAAACCCTCAGGGTTTGTTTTTTTAGGACGGATGAAGTATGTTATAATGGTCCTAGCTTTTTTTAGTATTGGAAATGAACTAACCTTTCTAGTTTTGTTGCTATGTAATAATAATGTGACATACTTGTGGTGGTCTCTGTTCAGAGTTTGCATATTTAAACATGCATGGCTTAAATGGTGTTATTTTGCTTTTGCAAATAATTGTACCTTTAGTGTAGTATGTTTATAGCAAGAAAAAAAAACTAAACAACTTGTATTGACTGACAAAAAAGATACTTAATGCTACTGGGGCTGCTGACTGCTGAGTAGTGTATGTTATGGCCAGAAACAAGGCAGCAAAAGGAAACAAGGCCCATTAATTACATGGACATTTAGTTAAATAAAGCCCATTTATTTCGTTGGGCACCACCTCAACTCGATTTGACATGGTCTAACGTGTACTCCCTCCGTCCCACAAAAAGTCGAATTCTAGGGGACGGAGTTTGTCCCACAAAAAACCGACTCCTGTGCACAAAACGAGAAACGTCATCTCGAGCACATCGATGGGCCCACGACCTCTCTCTCCTCGCGTTCAGTTCACACCGCTCAATCCTTATCCTCTCCCACCCAGCGGTTCTCCCCATCTCTCTCTCCTCTACTCCTCAGCCTTCTCCCGCTCCAACATCATGTGGAGACGGACGCGGCCTCGTCGGCGGGGGCAGCGGCGGCAAGCGGACACGGCATCGGTGGCGGCGACGAGCGGACACGGCCTCGTCGGTGGCGAAGGCAAGCAGACACGGCATCGGTGGTGGCGGCGGCAACAGGGGGATGCGGCCTCCTCGGCGGTGGCGGCAAGTGGATACGGCATCGGCGGCGGCGGCAACGAGCGGACGCGGCCTCGTCGGGGTTCTTGCTAGTTCATGCGTCGGGGTTCTTGCTAGTTCTTGTAGTATCTCTTTTTCTCTGTTGTTGGTTCAGTTCTTGGTTCTTCCATGTTCTTAGTACTTGCTAGTTCATGTTCTTGGTTCTTCTATGTTGTTGGTACTTGCTAGTTCGTGGCTTCATGCATGATGCAGATGGCAAAGGTGGAGGCTTGCTGGTTTTTGGTGTTGATGCGTTTGGTATTTGGCGTCGTCGTCAAAGGCAGGTGACACCATTACTCAGTGATGCATCGACGGCGAACATCCGGTGGTGGGATGCCTGGGTATCGAGGAAGGGGCTGGGAATGATTTAGTGTTCACATAGATTTTTTTCAAAACAAAAGTGCTAATCATGGTTGTACTTTATGGGGGTATTTTGGTCTTTCACCGCTTGGACTAAAAGTGCAGCGGGCTTATAGGATTCGATATTTTGTGGGACGGAGGGAGTATGCTGCTTAGAAATAGAAATTCGATCATTGCGTGCTCACATCTGAAATTTTGGGGCTGCATGTGTTTAGATGAAAAAAAAATCACCTATTTGCCTTTTTTTCGTTAAGTAAAACAACAAAACTTGCAACTAAAGGTGTTAGAGGTGGACCTAGCATTTACCGGGCTAGAAGGTGACGCCAACAAAAATGACGAGGCCCGCAATGTTTATCAAGTTGAGACCAGATCGAAGAGTCGAACGCCAATGACCCTCTTAAGCTGCACAAAGAACAGTATAAACCCGAGAACGGAAGAGAAACGGGAGAGACCTAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012683