BGIOSGA012809

From RiceWiki
Revision as of 09:52, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012809| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012809, complete gene.| tag = OsI_119...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012809

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012809, complete gene.

LocusTag

OsI_11919

Ensembl Transcript ID

BGIOSGA012809-TA

Ensembl Protein ID

BGIOSGA012809-PA

Length

3543

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17818045..17821587

Sequence Coding Region

17818045..17818296,17818507..17818577,17818688..17818716,17818807..17819003,17819713..17819838
,17820006..17820122,17820210..17820263,17820408..17820524,17820638..17820731
,17821508..17821587

Genome Context

<gbrowseImage1> name=IndicaChromosome03:17818045..17821587 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:17818045..17821587 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAGCTGGAGCTGGAGGAGGGCGGGGGCTCGCCGTCTCCGTCGCCGATGACGGCCGCCGGGAAGATGCAGGCGCTGGACTTCGAGCACATCGGGTCGCTCGCCGCGGTGGCGGAGTCGCTCTCGACGGGGAGCAAGTGGCGGAGGGCGCTCACCAGCGTGCGCGTCGTCATCCTCCAGGCCAAGATCAACGTCCTCCTCCCCTTCGGCCCCCTCGCCGTCATGCTCCACTACCTCTCCGCCAACCACCAAGGATGGGTTTTCCTTTTCAGCTTAATCGGCATCACGCCCTTGGCTGAGAGATTGGGATATGCGACCGAGCAGCTTGCTCTCTACACGGGTCCGACAATTGGGGGGCTGTTGAATGCTACCTTTGGCAATGCGACTGAGATGATTATCTCGTTGTACGCATTGAAAAACGGGATGATCCGTGTCGTCCAGCAATCGCTACTAGGCTCTATACTGTCAAACATGCTGTTGGTTCTCGGTTGTGCTTTCTTCGCTGGGGGTCTTGTCCATCCCAGCAGGGACCAGGTCTTCAACAAGGAAGAAGAAGTAACTGAGGATGAGGAGGAAGAAAAGGAGATAACACAGGGTGAAGCTATCTGTTGGCTTTTTGTGTTGACTATTTGGATTTCGATTCTCTCTGGGTACCTGGTAGACGCCATACAGGGGGCCTCTGAATCATTAAACATGCCAGTGGCCTTTATTAGTGTTATTCTGCTTCCAATCGTGGGAAATGCTGCTGAGCACGCAAGTGCCATTATGTTTGCCATGAAAGACAAACTTGATATTACACTTGGAGTTGCCATAGGATCGTCAACACAGATCTCCATGTTTGTGATCCCATTCTGTGTGGTAATTGGCTGGATAATGGGCCAACAAATGGACTTGAATTTTCAACTGTTCGAGACAGCAACTCTTTTTATAACAGTACTGGTGGTGGCATTTATGTTGCAGGAAGGAACATCGAACTATTTTAAAGGCCTTATGCTTATCTTATGCTATCTCATAGTTGCTGCGAGCTTCTTCGTACATGTTGATCCCGATTCAACGTTGCAGTTCAAGGGACACTGGATAACTGGACTACATAGTCCATACACATTTCCAAACGGTGCCAGTTGTGCAACATGA</cdnaseq>

Protein Sequence

<aaseq>MEELELEEGGGSPSPSPMTAAGKMQALDFEHIGSLAAVAESLSTGSKWRRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKEEEVTEDEEEEKEITQGEAICWLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPDSTLQFKGHWITGLHSPYTFPNGASCAT</aaseq>

Gene Sequence

<dnaseqindica>1..252#463..533#644..672#763..959#1669..1794#1962..2078#2166..2219#2364..2480#2594..2687#3464..3543#ATGGAGGAGCTGGAGCTGGAGGAGGGCGGGGGCTCGCCGTCTCCGTCGCCGATGACGGCCGCCGGGAAGATGCAGGCGCTGGACTTCGAGCACATCGGGTCGCTCGCCGCGGTGGCGGAGTCGCTCTCGACGGGGAGCAAGTGGCGGAGGGCGCTCACCAGCGTGCGCGTCGTCATCCTCCAGGCCAAGATCAACGTCCTCCTCCCCTTCGGCCCCCTCGCCGTCATGCTCCACTACCTCTCCGCCAACCACGTACTACTATGCTGCAACCCATTTCCTCCCCCCCCCCCCCCCCCTCGCTTAAGCATTTATTATTGTTTTGCTTAAACATTTGACTCGTTTGTGTTAAATGCCTTGTTAGAACCTTCCATATGGAGATGTCTTTTCCATTCCATTTCCTTGTTTTGTTGTGACAGCGACTGACTTTTGAATATGTCTTTCTTTCCTTCTCTGTGGACACAGCAAGGATGGGTTTTCCTTTTCAGCTTAATCGGCATCACGCCCTTGGCTGAGAGATTGGGATATGCGACCGAGTAAGTGCTACTGATTACTGAATTCACTGTAAATCTGTAATTACCCAGTTAGTTGTACTTACTATTGTGTCAAAATTCTCCTGACATTGTGGCTACTTCCTCTCTTGCAGGCAGCTTGCTCTCTACACGGGTCCGACAAGTATGTGCTTTCATTTTGTACCTGTCCTATCTTTTCATTCAAATCTTGGCTTCGTCGGATGGTAAAGATTCAAACTTTTCTGAACTGCAGTTGGGGGGCTGTTGAATGCTACCTTTGGCAATGCGACTGAGATGATTATCTCGTTGTACGCATTGAAAAACGGGATGATCCGTGTCGTCCAGCAATCGCTACTAGGCTCTATACTGTCAAACATGCTGTTGGTTCTCGGTTGTGCTTTCTTCGCTGGGGGTCTTGTCCATCCCAGCAGGGACCAGGTCTTCAACAAGGTAGCTTTATGTACAATACAGTAGTTCTCCTTATTATATTTCCCTTACAATTCTCATATGTAGCCTCAGTTTTGACATACATTTATGGATGCAGGCGTCAGCCGTTGTAAACTCAGGATTGCTTTTGATGGCTGTCTTGGGTCTAATGTTTCCAGCAGTACTTCACTTTACACATTCTGAAGTGCAGTATGGAAAATCCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACACTTGAAAACTGAACAGCCATATATGCGTAAAGAAATAACAATGTTAATTATGTAAAAAGGGCTTGGGATCACCTCAAACTATCTATTGTAATACTCAATTTCTCCTCAGTATCATGTAATACAAGTAATCAAGCTGCACATGATGCATGTAATGAGATGGCAACCTTTTTTTCTTTATCAATTTGTTAGCTCTACACTGTTACTCCTTGTGCCCTTCTATGAGTTTTGACAGAGTAAAACATGACTTTTGGCCACCTTTCTGACATTCCATAAGTGTCATGTTACCAGATTATTTTCCCAACAGTTTGGGCACTTCCAATTACATACTTTGTGAATCCACCTAGGGCAAGTAAAACCTACCTGACAAGACAGAAAGAATAAAATTTGAGATATTTGTTTCTTGCATGTCGTTATATATGCTTATACTGTGCACACTTCAACATCCTGTAGCAGGAAGAAGAAGTAACTGAGGATGAGGAGGAAGAAAAGGAGATAACACAGGGTGAAGCTATCTGTTGGCTTTTTGTGTTGACTATTTGGATTTCGATTCTCTCTGGGTACCTGGTAGACGCCATACAGGTATTGAAGAGTTCGTTGAAGATTACATCATGCCTGTTATATGTTGCTCCCATCAGACCTGGATTTCGCTAGTTACTTACCTTTATTATTTGCTGCTTCTATGCCATATTAAGCGAGGAAATGTATTTTTTACCCTTTAACATTGCATCATTCATATGTTATAACAGGGGGCCTCTGAATCATTAAACATGCCAGTGGCCTTTATTAGTGTTATTCTGCTTCCAATCGTGGGAAATGCTGCTGAGCACGCAAGTGCCATTATGTTTGCCATGAAAGACAAACTTGTAAGGAACCAAAGGATACTATTTCAATATGGTTTATATGTTAATCGTGTGCTATCTTCTTATTTTTAATCTCACCCTATTCCAAAGGATATTACACTTGGAGTTGCCATAGGATCGTCAACACAGATCTCCATGTTTGTGGTAAGAACATAAATGAATAGCATGCAACTAATCTGCTGTGGTTTTGCAAGCTCTGTACCGTTACAAGACCATGTTAATGACAACTAGTTGTTGTAGTAATGTTGAAACTGTTCCAACCAACACACTTTTTTACATGATTTGCAGATCCCATTCTGTGTGGTAATTGGCTGGATAATGGGCCAACAAATGGACTTGAATTTTCAACTGTTCGAGACAGCAACTCTTTTTATAACAGTACTGGTGGTGGCATTTATGTTGCAGGTGTGTTTAGAGAACTTATTAGCATCCTCTGTATTGTTCATACTTTATACAATTACAAGAGATCTTACTTTTATGATCTAGTGCAAATTCTAATTCTGAATAAATGTTTCCAGGAAGGAACATCGAACTATTTTAAAGGCCTTATGCTTATCTTATGCTATCTCATAGTTGCTGCGAGCTTCTTCGTACATGTTGATCCCGATTCAAGTAAGTATTTTGTTTGGCATTCAACCTCGACAACTATCCCAAAACTATTTCACCAGTTCTACTGGTTCTTAGGTGTAATGGTAAATTAGTTATCTTTCTATCTGCCTAAATTACTTCTATCCTCTGGGGCTCTGGGAATCTATCCAGCTGATTGACCAATTACCATTAGTCTGATTTCCTTACATGAAGGACAGATTTAGCTAAATTACTATCAGCTCTGACAGATGGTTATTGATACATGACAACTTTTTTATGTCCTGCACTTCTATCAATAACACTTAACTCGATAAAATCACTCAACAAAGTGGTTGGTCCAACACGACTGATTGTTAGAAGAAAATTTAAAGTTGACCCGTCTCTATAATGTACTGAGTCTCCGCTGTATCTCATGACCAAGTACCTTGTTTGACCTGAAGCAGGTAACAACAAGTGAAAGATCCGCAACAATTTGTGGAATGATAAGGGATGAGCATATTGGAATGTCAGCACTAGCAAACAGCAGTATTTGCAACATATCATCTGTCCGAGTCCTGATTTTTGACGGCCTATACCTGTCAGCAGTATCTCACACGGAGGCTTCAACTTCCGGCCTGGAGTTGCAAGGGCCCTGATGCGGCTTTTTTAAGATAGCGACGGCATCGCCCTTTGATTGAGAACCTGTAACTTTATTATGGGATAGTGTAATGTGCCAAGATCACTAGTCTGTATTTGCTGAAGAAACACTTGTCGCGATTTTTGATGATGTTGTTGTACTGATGCCAATGAACTGGCTATAGCGTTGCAGTTCAAGGGACACTGGATAACTGGACTACATAGTCCATACACATTTCCAAACGGTGCCAGTTGTGCAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012809

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA012809&oldid=57632"