BGIOSGA012842

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Revision as of 09:53, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012842| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012842, complete gene.| tag = OsI_119...")
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Gene Name

BGIOSGA012842

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012842, complete gene.

LocusTag

OsI_11982

Ensembl Transcript ID

BGIOSGA012842-TA

Ensembl Protein ID

BGIOSGA012842-PA

Length

3152

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18592553..18595704

Sequence Coding Region

18592553..18592705,18592860..18592916,18593236..18593344,18593513..18593697,18593779..18593867
,18594545..18594761,18595070..18595309,18595396..18595704

Genome Context

<gbrowseImage1> name=IndicaChromosome03:18592553..18595704 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:18592553..18595704 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACTTGATGAGGGGTCGTCCAGCTTCCGGGATCTGTACAGGAGCCTGCACACCAGTGTGGTGCTCGTCGGGGCGGCGTTTGTGCTCGTCGCCCTCCTCGTCTCGCTCTGGCTCATACTGCAGCATCTCAGATCATACAGCAACCCAGAGGAGCAGAAATGGATCATTGCTGTCCTGTTTATGGTGCCTGTATATGCCTCTGAATCTATAATTTCGCTGTGGCATTCAGAGTTCTCCTTGGCCTGTGATATACTGAGGAATTGTTATGAAGCATTTGCGCTCTATGCCTTCGGGCGTTACTTGGTTGCTTGTCTGGGTGGAGAACGGCAAGTGTTTCGCTTGCTTGAGAACAAAAAAAGGGAAGAGCTAACTGAGCAGTTGCTCGAGAGTCAAGATAAGGCACCAGTTCGTAACCGAAGCAGAGTCCACATCTTCTTCTGGGATCCAAATGCTCTGGGAGAGAGATTGTACACAATTATAAAATTCGGTCTCGTGCAATATATGATTCTCAAGTCATTATGCGCTTTCTTGTCATCCATCTTGGAGCTTTTTGGAAAATATGGAGATGGTGAATTCAAGTGGTACTATGGCCAGACATGGGCACTGTATTGTCTGGTGAAATTTTACAATGCAACACATGAAAAGCTACAGGAAATAAGGCCACTAGCCAAGTTCATAAGCTTCAAGGCCATCGTATTCGCCACTTGGTGGCAAGGACTGGGCATTGCAATCATCTGCCATATTGGGATCCTCCCAAAGGAAGGCAAAGTTCAGAATGCAATACAGGATTTCCTCATTTGCATTGAGATGGCTATTGCCGCTGTCGCACATGCTTTCGTCTTCAACGTGGAGCCATACCAGCACATTCCGGTGGTAGAGCATGGAGAGATCACCAGTGAAGAAAGTAAACTAGAGGTGAAGGTAGATTCCGACGACGACAGCAATGGCACACCAACCACCATTGAGGAGAAAGAGACCCATGTCGAAGCACCAGGGACAAGCATCAAAGAGAGCGTTCAGGATGTCGTTATCGGTGGTGGCCATCATGTTGTCAAGGATGTGGCCTTAACCATCTCGCAGGCGATCGGACCTGTGGAGAAAGGAGTCGAGAAAGGAGTAGGGAAGATTCAGGACACATTCCATCATATATCACTGAAGCCCAAGGGTGAGAAAGAACCTGAGGTCGAAGTGGAGGAGCACATCACCGAGAACACAGTGGATGGTGAACCTGTGGCAGTTGATGCAGAGGTAGAAGTCGAAAGAACGGTGCAAGATGATAACAGCATGGAAGGTGAATCATTGGTGGTTAATAGAGAGGTTGCAATTGAAAGAACAGGGAAAGACAACAAGAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MALDEGSSSFRDLYRSLHTSVVLVGAAFVLVALLVSLWLILQHLRSYSNPEEQKWIIAVLFMVPVYASESIISLWHSEFSLACDILRNCYEAFALYAFGRYLVACLGGERQVFRLLENKKREELTEQLLESQDKAPVRNRSRVHIFFWDPNALGERLYTIIKFGLVQYMILKSLCAFLSSILELFGKYGDGEFKWYYGQTWALYCLVKFYNATHEKLQEIRPLAKFISFKAIVFATWWQGLGIAIICHIGILPKEGKVQNAIQDFLICIEMAIAAVAHAFVFNVEPYQHIPVVEHGEITSEESKLEVKVDSDDDSNGTPTTIEEKETHVEAPGTSIKESVQDVVIGGGHHVVKDVALTISQAIGPVEKGVEKGVGKIQDTFHHISLKPKGEKEPEVEVEEHITENTVDGEPVAVDAEVEVERTVQDDNSMEGESLVVNREVAIERTGKDNKR</aaseq>

Gene Sequence

<dnaseqindica>1..153#308..364#684..792#961..1145#1227..1315#1993..2209#2518..2757#2844..3152#ATGGCACTTGATGAGGGGTCGTCCAGCTTCCGGGATCTGTACAGGAGCCTGCACACCAGTGTGGTGCTCGTCGGGGCGGCGTTTGTGCTCGTCGCCCTCCTCGTCTCGCTCTGGCTCATACTGCAGCATCTCAGATCATACAGCAACCCAGAGGTAACAACATGATATACATCACAACCCTGCACTTTTTGGGTGGCCATTTTAGCTGTATGGATCGGAAGGAATAGAACAATTTGTGGAGTAGTTTGCTGCAGTTGGACCGGGGCGAAGCAGTTGTTTTTAAGCTGTTGAAAATTGGATTCTGCAGGAGCAGAAATGGATCATTGCTGTCCTGTTTATGGTGCCTGTATATGCCTCTGAATCTGTAAGTTGGGGGGACTCTCTGTTTATTCTCAGATTTGTTGTAGGAAGGTTATCTAATTGACGCGGCATCATGATTGATTGTTCTACTAGATTTGCATTCAGTAGTATATTGTGTTGTGGAAATGCTAATGCAATCTTACTGAGCTTACTGACTGTTCAAGGTTGCTCATGCCACGGTGGTAATAGTACCAGAATATCATGGCTGCTTAATTTGGTTATCAGATTTTACCTGCATATAGGCATGTAGCATTCTTTTTTTAAAAACCATGTAACATACTGACATAAATTGATATCCCATTTCAGTTTCCAATTTTTTTCAGATAATTTCGCTGTGGCATTCAGAGTTCTCCTTGGCCTGTGATATACTGAGGAATTGTTATGAAGCATTTGCGCTCTATGCCTTCGGGCGTTACTTGGTTGCTTGTCTGGGTAATCCTACCTACTTATGAATAATATGCAAACATCATTGATCCATCATCAATCTACTATAGAATTTGCACTGCATATTCATAAATGACCTCCACCAACTTGTTATGTATATCATACACATCCCTGTAAACTTAAGCCATGGAAATGTTGAGTTCTGAACAATTTCAGGTGGAGAACGGCAAGTGTTTCGCTTGCTTGAGAACAAAAAAAGGGAAGAGCTAACTGAGCAGTTGCTCGAGAGTCAAGATAAGGCACCAGTTCGTAACCGAAGCAGAGTCCACATCTTCTTCTGGGATCCAAATGCTCTGGGAGAGAGATTGTACACAATTATAAAATTCGGTCTCGTGCAATATGTAAGAACGTGCAAATGTTTTCTCATCCTGATATTGGTCAATAGCAAAATGTCTCACATCCCTTCTTTCACGAAATTTCAGATGATTCTCAAGTCATTATGCGCTTTCTTGTCATCCATCTTGGAGCTTTTTGGAAAATATGGAGATGGTGAATTCAAGTGGTACTATGGGTAACTCTCATACAACTTTTTTGGGTTATTTAAAGTAGAGAAACAAGTGAATTCAAAGAATATAGTAGATATATGGGAAAGTGATTTCATCCATCAAGAGGATATCCCCTCGTTTCGTGCATGCCATCTGTTATCAAAAAATTTAAATTTTGTTGGCAAGATAAATTAATATGAAATATATTACTCCACAAACATGCAAGTTAAAATTCAATTTCTACATAACAAAAATAACAAATATAGATACAAATATACAACAATTATTTTCAGTTTAATTTGTTCTTTTTGTTGCAACTTGTAGGAGTCAAATTTGGTTTTGCGTATTTGTGGAGTGATATATTTAATATTCATCTATGTTGTCAATTCTTTTCAATTTTTTTTAATAACTATTTAGATGACATGCAAACAACGAGGGGATATCCCCTCGAGGGATGAAAATCCATATCTAGATGATGGAAAATATTCTGTTTAGAGTTCTTTAGTTGTTAACATGAGTTTAGATATCATGATATGCAATAATATTTCAGGCAAACCGTGATTTAATGCCCGTGAACATGCAATTGCTACCGCCAATATACATGTAATGACTTTTTTAACGATAGTAATGGCTCTTTTTCGCTAAACCAATGCATTCATTTAACATACAGATACCCCTACATTGCTGTTGTCATAAATTTCAGCCAGACATGGGCACTGTATTGTCTGGTGAAATTTTACAATGCAACACATGAAAAGCTACAGGAAATAAGGCCACTAGCCAAGTTCATAAGCTTCAAGGCCATCGTATTCGCCACTTGGTGGCAAGGACTGGGCATTGCAATCATCTGCCATATTGGGATCCTCCCAAAGGAAGGCAAAGTTCAGAATGCAATACAGGATTTCCTCATTTGCATTGAGGTAATATACTTCTTGTAGTGCCCAGATTGGCCTTCTGTTATACTCCCTCCGTTTTAAAATGTTTGACACCGTTGACTTTTTAGTACGTGTTTGACCATTCGTCTTATTCAAAAAATTTAAGTAATTATTAATTCTTTTCATATCATTTGATTCATTGTTAAATATACTTTCATGTACACATATAGTTTTACGTATTTCACAAATTTTTTTGTATAAGACGAACGGTCAAACATGTGCTAAAAAGTCAACGGTGTTAAACATTTTGAAACGGAGGGAGTACAATATTAACATGCTAGTCCTTTTCTTAGATGGCTATTGCCGCTGTCGCACATGCTTTCGTCTTCAACGTGGAGCCATACCAGCACATTCCGGTGGTAGAGCATGGAGAGATCACCAGTGAAGAAAGTAAACTAGAGGTGAAGGTAGATTCCGACGACGACAGCAATGGCACACCAACCACCATTGAGGAGAAAGAGACCCATGTCGAAGCACCAGGGACAAGCATCAAAGAGAGCGTTCAGGATGTCGTTATCGGTGGTGGCCATCATGTAAACTGATCGCATCAAACTTCAAGAATGAATTGCTGATATCTGTATACCAAGATGATCACATTACATTGTTCATCTTTCTGCAGGTTGTCAAGGATGTGGCCTTAACCATCTCGCAGGCGATCGGACCTGTGGAGAAAGGAGTCGAGAAAGGAGTAGGGAAGATTCAGGACACATTCCATCATATATCACTGAAGCCCAAGGGTGAGAAAGAACCTGAGGTCGAAGTGGAGGAGCACATCACCGAGAACACAGTGGATGGTGAACCTGTGGCAGTTGATGCAGAGGTAGAAGTCGAAAGAACGGTGCAAGATGATAACAGCATGGAAGGTGAATCATTGGTGGTTAATAGAGAGGTTGCAATTGAAAGAACAGGGAAAGACAACAAGAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012842