BGIOSGA012860

From RiceWiki
Revision as of 09:53, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012860| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012860, complete gene.| tag = OsI_120...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012860

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012860, complete gene.

LocusTag

OsI_12026

Ensembl Transcript ID

BGIOSGA012860-TA

Ensembl Protein ID

BGIOSGA012860-PA

Length

6196

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19080658..19086853

Sequence Coding Region

19080658..19080699,19081656..19081712,19081841..19081948,19082762..19082821,19082938..19083045
,19083125..19083199,19083359..19083421,19083519..19083912,19085528..19085640
,19085788..19085818,19085976..19086853

Genome Context

<gbrowseImage1> name=IndicaChromosome03:19080658..19086853 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:19080658..19086853 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTGCGAGAACGGCGCCGCTGGCGAGGATCGATCCAAGGTTGGTGAATTCAAAGAAGAAATCCTGCAACTTGCTGCGCTTGCAAGTCAAGGAGAGGAAAATTCACGGGCAGAGCTACTGGAGAAGTTCAACAAATGTAACAAAGATACACTCGTTGAACTGATCCGTTCATTTGATATGACTGGTTCAAAAGCTAATAGGAAGATAAATGACTTCAAAGAACAAACCCTCCAACTTGCTAGGCTTGCATTTCATGAAGAAGAGGAAAAATCACAGGCAGAGCTTCTGGAGAAGCTCAACAAATCTAACAAAGATACTATAGTTGAACTTTGCCGTTCATTTGATATCATTGGCTCAAAAGCTAACAGGAAGGAGGAATTAGTAATAATTATGATGGAGTTCTTGAAGGAACACTGTTCTGGGACTGATGCCACAGACCCTGATAAGAAAACTAAGAAAAGAAGGCGTAAGAATGAAGTTACACATCTATCTGGCAGTAAACCTTTGAAGAAAATAAAACTTGATGGAACTTCACTGGAAATTCATGGTGAAGAGGAAGATAGTGGGGCTAAGTATGAGGAGAATATAACAAAATACTCGGAGTGTGACTTGGACGACAACAACAATGAATGTGCTAATAATGAGAAAGGACGATTTCCAAAGAATAAGGCCAGCCTTGAGCCTTCTGAAAGGGTAAATGATGTGCCAAAGAATTTTGTTGGAGCAGCTCCCACTGAAGTTCAAATACTTTCAAATGAACAAGCACTATCTAAGACACCGTTTGCAAAGGTGGTTACCACCGTTGAAGGAGATAGAACTGACATGAAGACTTCTGGAAAGAAAAATGCTTCTATCACCAAGAAAAAAATGACCTCTAAGACAGATCGCAAGGAAAAATTTTGTGGTAAACAGATGTACAAAGGAGATGGGAAACCTCGGAAACTGGCAGCAATACCAAACAGGGATGAGCTGAGGCAAGCTGTCTTCTTGATCTTAGATTCTGCAGATTTTGCGACGATGACTTTTGGAGATGTTGTGAAAGAAGTCGACAAATACTTTGGCAAGGATCTCTTTGAGAAAAAGCCACTTATAAGATCCCTGATAGAAGAAGAGCTCTTTAGGCTAGGGGAGGAAGCTGAGAAGAAAGAACTGGAAGAAGAAGCGGCAGAAGTAAAAGCTAGAGCTGAACAAGCTGCGAAGGAAGGGACAAATGCTGGAGTTAATTCAGGTATAGACACGGGGGAAGCACTTCAAGTTAAGGATGGCAAATCTGAAGATGCTGCAAAGAACAAACGTGACAATAGTGCTGAAAATGGTCCGAAAGGTGGGGTATCTGTAGAAGTTGCTGAGAACATAAACAGAAGTGCGGCTGCTGAAAGTTCGCAGGATGGACGGTGTGAACATGACAGAGAGAATGCAAACAATGGCGGTGACTTTATCAGGGATGATAATGCTGTGCAGGATTCTATCAGTGGTGATCATGTGGAATATTCCAGAGATGGTGAAGCTGAAAGGGCAAAGATGAACAGTAATGGTGAAGCCGTAGAAGCCGTAGATGGCGGAACTGAAGCATCAAAAGGTGGAGAAAGTGCTGACCCCAAAGATGATAACAACCGAAATGGCGATAAAAGTGCACTAGATATTGATGATCGTGGAGCTGAAGATTCTCACTGCAACAAAAACGGTGAAAATGTAGCTTGTGTGGAAAATGGCAAAACTAATGAAGCTGGCAACACTGAGAACGGTGAAAATGTGGTATCCCACGATGCTGAAAAGGATGACAAAAGAAAGGATCCCATTCAAAATGCAAACCCCGAACAGACCCTAACAGATGCTGGTGATGATGGTAAAACTGAAGATGCCGAGCACAACGCCAACACCGAAGCTGATGTTGATTCTTGTGCCGATGGTACTGCTGAGAATTAG</cdnaseq>

Protein Sequence

<aaseq>MDCENGAAGEDRSKVGEFKEEILQLAALASQGEENSRAELLEKFNKCNKDTLVELIRSFDMTGSKANRKINDFKEQTLQLARLAFHEEEEKSQAELLEKLNKSNKDTIVELCRSFDIIGSKANRKEELVIIMMEFLKEHCSGTDATDPDKKTKKRRRKNEVTHLSGSKPLKKIKLDGTSLEIHGEEEDSGAKYEENITKYSECDLDDNNNECANNEKGRFPKNKASLEPSERVNDVPKNFVGAAPTEVQILSNEQALSKTPFAKVVTTVEGDRTDMKTSGKKNASITKKKMTSKTDRKEKFCGKQMYKGDGKPRKLAAIPNRDELRQAVFLILDSADFATMTFGDVVKEVDKYFGKDLFEKKPLIRSLIEEELFRLGEEAEKKELEEEAAEVKARAEQAAKEGTNAGVNSGIDTGEALQVKDGKSEDAAKNKRDNSAENGPKGGVSVEVAENINRSAAAESSQDGRCEHDRENANNGGDFIRDDNAVQDSISGDHVEYSRDGEAERAKMNSNGEAVEAVDGGTEASKGGESADPKDDNNRNGDKSALDIDDRGAEDSHCNKNGENVACVENGKTNEAGNTENGENVVSHDAEKDDKRKDPIQNANPEQTLTDAGDDGKTEDAEHNANTEADVDSCADGTAEN</aaseq>

Gene Sequence

<dnaseqindica>1..42#999..1055#1184..1291#2105..2164#2281..2388#2468..2542#2702..2764#2862..3255#4871..4983#5131..5161#5319..6196#ATGGACTGCGAGAACGGCGCCGCTGGCGAGGATCGATCCAAGGTTAGCGAGATCCCCATTCCTCCATTGTTCCGTTTTGTGCGGCTGTCTGAGGGTGTCATGCGTCCATGTCCTGTGCTGTGTGCGCGTTTTGGGGGAAATGGCACTTTGTGTTTGTGTGTGTGTTGGTTAGCAGCATTCTTTTAGCCATGGATTGAACAATGAGCTCCTGCTTCGTAGTACTCACTCCGTCCAAATTATAGAGCGCCCCTTTTTTAGGAAAATCAAACTCGGTAGCTTTTAACTAATAATAATATTAACCATAGCATATCTATGCTAAGGATTATACTCCCTCCGTTTCATAATGTAAGACTTTCTAGTATTGCCCACATTCATATAGATGTTAATGAATCTAGACACGCAGACACATCTATATGAATGTGGGCAATGCTAGAAAGTCTTACATTATGAAACGGAGGGAGTACATGTTATATTACTATATTCATATTTTAAAGTACTTTCATGTGATGCTAATTTCTTATTCGTTGGGAACACGTATAATTTTGGACGGAGGGAGTACTATATTTACTAGTAGATCGCTTGAATTGATGATGCCTTCCGCATTTGGTATCTCTGCCGTAAAGGAAAAATAATCCCTTTCCTTTATATATAGTCCGCCAAGGGCCTTCGCCAAGGATATTCTTATTCACTGCTCAGAGAAAATGAAAAAAAAAAAGCCATGGATTGACCATGCTGTGACCCTGTGAACCCCTTGGCGATGGGCGTCTCAATGTCTTGGTGGTTATAACAAGCATAATGAAATTAATGATGAATCATGCAGAGAGTGAGATATAATTTGTTCAAATTGTGCAAGTCTAATCCATGGATTTTGCATGCAGTATGCTTGCATCATGTAAACCAAGTATTGAGTTATGCGAGTATTCGAATATGTTTATCACATATGTCCCCATTTTTCATAAATAACTTCCAGTTCGGTGATTGTTGATTCTTACTACCAGGTTGGTGAATTCAAAGAAGAAATCCTGCAACTTGCTGCGCTTGCAAGTCAAGGAGAGGTATACAGTGTTGTAGTAGTCATCTGGAAACAGTTTGGTGGTACAAATTTCAGTGCATCCTATATGTTCTATTCACATACTGCAGCTTGTTTGATTCTAAATGTGCTGTTTATATGACCATATGGCAGGAAAATTCACGGGCAGAGCTACTGGAGAAGTTCAACAAATGTAACAAAGATACACTCGTTGAACTGATCCGTTCATTTGATATGACTGGTTCAAAAGCTAATAGGAAGGTACGTCAGGCTAATATTTGAGATCTCTTTTACCTTTTGCAATCCTGAGGATTATGTTTCTTCCTCAGGAGGAACTTGTGACAAAATTGATGGAGTTCTTCAAAGTACACTGTCCTGATACTAACAGCGCATACCTTGATAAGGTTCAATTTCTGAACTGCAAGTTAATTTGGTCATGCCAATTTGTGTAAGACTTTTTTCTAGTGCTAATACTCATGTAGTCTCGTTCTCTATCTTTGTGATAACTGATAGCCTATTTTCACCTCACATGTCTGATTGAACCATATCGACTGTGTCAATGGCATGTGTCAAATGATTAAGAAATAGTTCTCTGGAGAATTATACCCTGCTTCTTAAATGCGTGCGAGTTATACTTTTGGCCTTGGCTGTTATGCATTTATATATGCTTGTATTCTGCCCTGGATATGGGCCTCTAAGCTTATAGATCATTGTGTTGGTGGCTCGGTGCCTTGGTTGTGATGACAAGCATTATGAGACTAGTGTTAAAGTATGCAGAGTATGAGATATGCTTCGTTTTTATTAATGTACATATCATATCTAGGGATTGAGCATGTGGTATGCTGGTGTCATGTAAATAAAGTACTGAGTTATGCCTTTTTTGGAAGCATGTACAGAATTATGTTGTGTACTTATGGACCATGCTTTCCATTGTTTATCTTTTCCTTCTAATTTCAAATCTAGCTATTGAGTATGCAATTATGTTTACATTTTTTGAGTTATGTTGTCGGTTATGGATTATGCCCTAAATCGTATGAAATAAAGGCCTTACAGTTTGGTGACCTTCATTATCAGATAAATGACTTCAAAGAACAAACCCTCCAACTTGCTAGGCTTGCATTTCATGAAGAAGAGGTACATTCGTTTTGGAACAGCTTTGGTAGCATAATTTAGTTTTGTCATTGTTCTTTTATTCGTTCATAGAAGATTCTTTGTATATTCCTAAACTTTATGTGGTTGCTGGATAACAGGAAAAATCACAGGCAGAGCTTCTGGAGAAGCTCAACAAATCTAACAAAGATACTATAGTTGAACTTTGCCGTTCATTTGATATCATTGGCTCAAAAGCTAACAGGAAGGTAGCTCCAGTTAAATATTTGAAGTTTCTTTCATTTTATGCAATAATGACATGCAAAAGTACTACCTTTTCTTTTGCAGGAGGAATTAGTAATAATTATGATGGAGTTCTTGAAGGAACACTGTTCTGGGACTGATGCCACAGACCCTGATAAGGTTCAAGTTCTTAAACTGCAAATTAGTTGGCCATGTCTGATGTTTTCTGTAATGCAAATATTTAAATTCCTTTCTCCATCGTAATTGGTAACATGTGTATGATGGTACATGTTAGATTGAAGCCATTGAACCATCTTAGTTGTTTTCTACCCATTACAGAAAACTAAGAAAAGAAGGCGTAAGAATGAAGTTACACATCTATCTGGCAGTAAACCTTTGAAGGTATACCATAGTTGTGTTGTATTTCCTTCTGCAGTCATGTTTGTGACACCAAGCTTCTTTCATATATATTGTTTTCTTTATTACCAAACTACTGCAGAAAATAAAACTTGATGGAACTTCACTGGAAATTCATGGTGAAGAGGAAGATAGTGGGGCTAAGTATGAGGAGAATATAACAAAATACTCGGAGTGTGACTTGGACGACAACAACAATGAATGTGCTAATAATGAGAAAGGACGATTTCCAAAGAATAAGGCCAGCCTTGAGCCTTCTGAAAGGGTAAATGATGTGCCAAAGAATTTTGTTGGAGCAGCTCCCACTGAAGTTCAAATACTTTCAAATGAACAAGCACTATCTAAGACACCGTTTGCAAAGGTGGTTACCACCGTTGAAGGAGATAGAACTGACATGAAGACTTCTGGAAAGAAAAATGCTTCTATCACCAAGAAAAAAATGACCTCTAAGACAGATCGCAAGGAAAAATTTTGTGGTATTTTTCTGGAGTCTTTGTTTTCATTTATGCATCTTTGGCTCATTTGTGTTGTCTTGTTTGCATATCTCCATGTTGAAAAAGAACTTAGAAACACATATGCACCAGTTGCTCAGTTTGTTTTGCATTGTTTGCACATCTACATGTTGAGAAAGCACTTGCTGAAAAAAATTCAGTATTCATGAATGCCCCACATGTATTACTATTTGCTACTGCAAGGTATTTATTACTGCTTTGTCTGTAAAGATTATATTTGAGTTGGATAACTTGTCAATATGGTGGTGCAGAGTTAGCTGTCCTTTTGATAAACCACAAAGGGTACTGTATTGAAATAACTAAAACACAAGTTAAATGTCCACACATTTTTGTTGGTGATAAGGTGGAAACAATGTTTTATAGTACATAAGAACTCTAAACATTGCACTCTCTCTACTCATAAATATTTGACGTTTAGGACAAGATTTGGTCAAACTTTTGAAACTTTGACCATCAGTAATTTCTCATTTTTTTTTTAAAAAAAAGGATGGCAATTGAAAAGTATAATAATATCATAAACTTATTTTAATATAAAATTGATTGTCAAGATTTTAGAAGTATGACCGAATTGTGTCCTAAGCGTCAAATATTTATGACCAGAGGGAGTAGCCGTAAAGATAGTATAATTCCAGAAACTATGCTGGTACCAGATTATCCAGATAATTAATCATGTCAAGGGTAGCTGGGATGGTTAAAATTGAGTTAAGTAGTGAGTATAAATTGGGTTTTGGATGAACAACAACACGGATGGAGATGTATCAACTGATCAGGTGGGATGGACTAATATAGGGCACTGTAATGCACGCAAACTGAAAACCCATGTTCTTTTCCGGGAAATATTTGAATCATACAGTAATGTGCAATATTGTAATGTACTGTGATATTCACTCATATAGTGCTTATGCGCGAAATAAATTGATCAAGAGAGTTGGCGGTAATTCCGACTTTGAGATATACTCCCTCTGTCTCATATTATAAGGGATTTTGAGTGGATGTGACACATTCTAGTTCTAGTACTACGAATCTGAACAGGCTCAGTGTCCAGATTTCTAGGTTACTACTCAAAATTCCTTATAATATGGGATGGAGGGAGTAGATAGTAGTGAGCACATATATATACTCTTGTGTAACTGATTGTGGAGCTTCACCGATAATTCGTCAAACATTGTACTTGATTGATACTTCCTCCGTTTCATATTATAAGACTTTCTAGCATTGCCCACATTCATATATATGTTAATGAATCTAGACATATATATGTGTTTGGATTCATTAACATGTATATGAATGTGGACAATGCTAGAAAGTCTTATAATATGACACGGAGAGAGTAGTTTGATACACAAGATATTAATGATGCATGTTAATCTTTTTATGAAAAATGCGTGAATACTGTGGTTAAAGTTCATGTGCTAGAACACTGTTTCCATGCTGTGAATGAGATAGGGCCACAGATTTACTTCAGTCAACCTTACTTCATGTTATTGTGCAAATCATGTTGTTTTTCTCCACAAGTTGTATAATCTCCAGCTCCTCATTTATAGTCCTTTTCAAAACCTTGTTTCTTTTGTATTCAAAGGTAAACAGATGTACAAAGGAGATGGGAAACCTCGGAAACTGGCAGCAATACCAAACAGGGATGAGCTGAGGCAAGCTGTCTTCTTGATCTTAGATTCTGCAGATTTTGCGACGGTGAGATGCAATATGGTTCACTGTTTTTGTTAATCATGTAGTTCAGTTGTAAGATACAATGATGTTTACATAATTAAAGATTACGTCTGGTAATTCCATTACGTTCTCCCTGTTTCTCATGATCTATTTATTATGTTCCCATTTCAGATGACTTTTGGAGATGTTGTGAAAGAAGTCGGTATGTCTTTATTCGCCACCTTTGTCTTGCACTCTTTCTTTTCTTTTTTTCCCTGTTATCTGGTGATTGGAGATATGTAGCATGTGTTTGGTAGTGGTTCAGAAACTGTGAGACTACCTGGAAATGCTATCTCATTGGTTTACATTCATATCTTCAGACAAATACTTTGGCAAGGATCTCTTTGAGAAAAAGCCACTTATAAGATCCCTGATAGAAGAAGAGCTCTTTAGGCTAGGGGAGGAAGCTGAGAAGAAAGAACTGGAAGAAGAAGCGGCAGAAGTAAAAGCTAGAGCTGAACAAGCTGCGAAGGAAGGGACAAATGCTGGAGTTAATTCAGGTATAGACACGGGGGAAGCACTTCAAGTTAAGGATGGCAAATCTGAAGATGCTGCAAAGAACAAACGTGACAATAGTGCTGAAAATGGTCCGAAAGGTGGGGTATCTGTAGAAGTTGCTGAGAACATAAACAGAAGTGCGGCTGCTGAAAGTTCGCAGGATGGACGGTGTGAACATGACAGAGAGAATGCAAACAATGGCGGTGACTTTATCAGGGATGATAATGCTGTGCAGGATTCTATCAGTGGTGATCATGTGGAATATTCCAGAGATGGTGAAGCTGAAAGGGCAAAGATGAACAGTAATGGTGAAGCCGTAGAAGCCGTAGATGGCGGAACTGAAGCATCAAAAGGTGGAGAAAGTGCTGACCCCAAAGATGATAACAACCGAAATGGCGATAAAAGTGCACTAGATATTGATGATCGTGGAGCTGAAGATTCTCACTGCAACAAAAACGGTGAAAATGTAGCTTGTGTGGAAAATGGCAAAACTAATGAAGCTGGCAACACTGAGAACGGTGAAAATGTGGTATCCCACGATGCTGAAAAGGATGACAAAAGAAAGGATCCCATTCAAAATGCAAACCCCGAACAGACCCTAACAGATGCTGGTGATGATGGTAAAACTGAAGATGCCGAGCACAACGCCAACACCGAAGCTGATGTTGATTCTTGTGCCGATGGTACTGCTGAGAATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012860