BGIOSGA013082

From RiceWiki
Revision as of 09:56, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013082| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013082, complete gene.| tag = OsI_125...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013082

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013082, complete gene.

LocusTag

OsI_12528

Ensembl Transcript ID

BGIOSGA013082-TA

Ensembl Protein ID

BGIOSGA013082-PA

Length

1904

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25830246..25832149

Sequence Coding Region

25830246..25830248,25830516..25830588,25830665..25830767,25830846..25830900,25830982..25831076
,25831447..25831738,25831826..25832029,25832117..25832149

Genome Context

<gbrowseImage1> name=IndicaChromosome03:25830246..25832149 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:25830246..25832149 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCAATCTCTGTGACAGTATGGGTATGGGATTAAATCCCAGCATGGATAACTTCAAAATCAATAAACTGTTAGGTAAAGGTCGATATGGGGAAGTGTATGAATGCACTTATTCTAATGGTCAATATGCAGTAAAAACGATTGATGTAACCAATTATTTTGACCACACTGAACCAAGAGAAGTCAGCATTATGTCTTGCCTTCAAGACGCAAACATTGTTACCTTTTACCAGGCGTGGTGTGAAAACAAGAAAGAGGAAAACAAATTTCATGGTTTTGGTGTACATGAGCCGAAATATATTTATATTCATATGGAGGCCTGTGCCAGGACCCTTTATGATTTTCTGTGTGGAAATAATGAAGGAACAATTCAGGACAGGTGGTCTCTTTTTGAGAGAATCGTAAAAGGTGTAAGATGCATCCATGCTACTGGGATAATCCACCGTGACCTCAAGCCATGGAATATTTTCCTTGGACCTTGTGGCGCTGTTAGAATTGGTGATTTAGGACATGGTTGCTGGTCTAAATCTTACTGTGATGGTCGACGTGGTTCACCTGATTGTGGAACCATGTTGTATTCGGCACCAGAGCTCAGGAATGGGCTGTTGGTTACTGATAAGGTTGATGTGTACAGTTTAGGAGTGATATATCTTGAGATCTTCATGCCTGCTGCTGTTAGTGTTAACAACAGAGTTGATGCATTGATCGATTTGATGGAAAGACGATACAAACCAGAATGGACAGCTTGGTCCATCGATATGGAATTCTTAAAGGACCTAACTGCTTTAAACCCATGTGACCGTCCATCTGTGGGTACAATTTTGGAATATATCGCCGAACACGCAAGTGACTGTTGA</cdnaseq>

Protein Sequence

<aaseq>MPNLCDSMGMGLNPSMDNFKINKLLGKGRYGEVYECTYSNGQYAVKTIDVTNYFDHTEPREVSIMSCLQDANIVTFYQAWCENKKEENKFHGFGVHEPKYIYIHMEACARTLYDFLCGNNEGTIQDRWSLFERIVKGVRCIHATGIIHRDLKPWNIFLGPCGAVRIGDLGHGCWSKSYCDGRRGSPDCGTMLYSAPELRNGLLVTDKVDVYSLGVIYLEIFMPAAVSVNNRVDALIDLMERRYKPEWTAWSIDMEFLKDLTALNPCDRPSVGTILEYIAEHASDC</aaseq>

Gene Sequence

<dnaseqindica>1..3#271..343#420..522#601..655#737..831#1202..1493#1581..1784#1872..1904#ATGGTAACAGTCATCTTTTATACTTGTCATTGTAGGGAAAAATTCCATTTGATTCTCGCAAACTATTTTGTGTCGCTTAAAATGAACATTTCTTCATTATTCTTTATTGTCTTATAACATTTAATTCTGTTGCAGACCTTCAATCACTGGAAAACAGGTTTGATGTGCAAGCTAGAATTTGAAGGACACCTGGTACATAAATAACAACTTTCTGATATAAGATGTTTGATACCTTTTCTGTTATTTATCGCATTTCATCTTCCTCTATAGCCCAATCTCTGTGACAGTATGGGTATGGGATTAAATCCCAGCATGGATAACTTCAAAATCAATAAACTGTTAGGTAAGAAACCTATATATATTTGCATGCATTAAAGTGTTGCAATGACAATCAATCTTGTCAATGAAATCTTTAACAGGTAAAGGTCGATATGGGGAAGTGTATGAATGCACTTATTCTAATGGTCAATATGCAGTAAAAACGATTGATGTAACCAATTATTTTGACCACACTGAACCAAGGTTTGTGAGTGTTATCCTTCTCTAAGGTTTATATTCTTAAATATGCCATTTTCTAAGTTGTAAATTTCTTTATTTCAGAGAAGTCAGCATTATGTCTTGCCTTCAAGACGCAAACATTGTTACCTTTTACCAGGTACTCTTAAGTCCCTAACAAAAAGGTCTTTACACTTCTAACTGCAACTGTTAATTATGTTTCTGAATTTGAATTTATTAGGCGTGGTGTGAAAACAAGAAAGAGGAAAACAAATTTCATGGTTTTGGTGTACATGAGCCGAAATATATTTATATTCATATGGAGGCCTGTGCCAGGTACAAACACATTTTCTGTATGCTTGTTATCAATTACACTTCCCTTCAGGCCACATGAGAAACTACAGGCAGCTAAAAAAAATCCTTTTAAAACAAGCCGATTCTCTTGTTGTGGTTGACATGATTATATCTATAGAATAATGTTAAGGATGCTTCCAGAAACATGCAAAACTGTAGAAACGAATTTGAGAAGTAGCGAATTGGTTGAAGCATTATAATTCAATAGGAGCTTGTATTGAATAAGAGTCGATATATTCTTGGAATAAGAGGCCACTACGCCATTGCACTGTCCCAAGCGATTAGAATGACGGCTGTTAATCAACTTTTACAGCTTATAGACTTCTCCTGAAATTTTATATATCACATGCAGGACCCTTTATGATTTTCTGTGTGGAAATAATGAAGGAACAATTCAGGACAGGTGGTCTCTTTTTGAGAGAATCGTAAAAGGTGTAAGATGCATCCATGCTACTGGGATAATCCACCGTGACCTCAAGCCATGGAATATTTTCCTTGGACCTTGTGGCGCTGTTAGAATTGGTGATTTAGGACATGGTTGCTGGTCTAAATCTTACTGTGATGGTCGACGTGGTTCACCTGATTGTGGAACCATGTTGTATTCGGCACCAGAGCTCAGGAATGGGCTGTTGGTTACTGATAAGGTATTCCTTATCACAGTTTCACTTTTCAAACGTTTTCAACTATCAGTTAATAGTTTCACATATAATTTATTCTTGCTGTTATCGTAGGTTGATGTGTACAGTTTAGGAGTGATATATCTTGAGATCTTCATGCCTGCTGCTGTTAGTGTTAACAACAGAGTTGATGCATTGATCGATTTGATGGAAAGACGATACAAACCAGAATGGACAGCTTGGTCCATCGATATGGAATTCTTAAAGGACCTAACTGCTTTAAACCCATGTGACCGTCCATCTGTGGGTACAATTTTGGTACGTACTTACGACTAGCAATAAACATTAAACTGCTTGCATATAGCATTAATTTGATCATTTTTTCTGTTTTTATTTTTATTACAGGAATATATCGCCGAACACGCAAGTGACTGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013082