BGIOSGA013216

From RiceWiki
Revision as of 09:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013216| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013216, complete gene.| tag = P0407H1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013216

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013216, complete gene.

LocusTag

P0407H12.110

Ensembl Transcript ID

BGIOSGA013216-TA

Ensembl Protein ID

BGIOSGA013216-PA

Length

6222

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28882551..28888772

Sequence Coding Region

28882551..28883684,28888761..28888772

Genome Context

<gbrowseImage1> name=IndicaChromosome03:28882551..28888772 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:28882551..28888772 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGCGGCCGATTCTTCTCCAGCCTCGCCGCACTCTCCTCTCCCATCTCCGGCGCCGTGGCCACGACGCGACCGACGACGACAAGGCGGTTCTTCGCCTCCGCTGCCTGATTGGCTCACGGGGCTACGCCTCCTCCTCCGATGCCACCAACGCCGCCGCCGCCGCCGACATCGCGGCACCTCGAGCTGACAGCAGGAGGCGGCGGCGTTCACCGGCGGCGAAGGCGAAGGCGAAGCAGCATCTGTACGTCGTGCTGACTGACCGGAAGGACGCGTGCGCCATCCACAAGCTGGACATCGACGGCGGTAGCGGTGGCGTCGACAACGGCCACCTGATGAACGCCGGCGGCGGCATGGCTTCACCGAAGACCCTCCCGCGGCTCCCCGAGCCGCCGCTCCTCCGGCTGCAGAGCCCCACAGTCCACCCATGCTCCAAGTTCACCACCGTCGGCAGCAGCATCGTCACCATGGGCGAGTATTTCAGCGATGATTATTACGACAGCGATTGTTGTCCCGAAGCCAGAGGGAACACCCTTGTCTACGACACCAAGACGGCGGCGCTCACCGTCGTGCGCCACCTCCCAGAAGGCCTTGTTGTTGGTGTCTCCCACTACGTGGCCGCCATTGTCGCCGGCGACAACAGGCTGTACGTGTTCGATGCGACCACGGTGGACGACTACCATGACGGAGTCGTTGGAGGCATGCACTGCTTTAGACTGACCGACGACGACGGTTCGAGGAAGAAGAAAGAGCGGTGGTCATGGCGGCACCCGGACGCCTCCACGCCCATCTCGTGGAGCTACGACCCGTCCCATCTCCCGTTCGACGCCATCACCGGCAAAATCGAGGCGTACGCCGTCCACCCGGAAGGACGGACCTTCTTCGTGTCCGTGCGGAAGCTGTTCCGCCGCGTGCCCGGCGCCGTGGACGACGAGGGTACCTTCTCCTACAGCGTCGAGAGCGGCGCGTGGACGCGCCGCGGGGGATGGATGCTGCCGTTCGTCGGCCACGGCCACTACGACGGCGAGCTCGGCTCGTGGGTCGGCCTCCATCATAGCGACGACGATGACGGGCGCCTCTCCGCCTGCCGCGTCGTGTCCGCCAGACAGCGCCGCGCGCCGTCGGAGGTGCAGGGTTCGTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MWRPILLQPRRTLLSHLRRRGHDATDDDKAVLRLRCLIGSRGYASSSDATNAAAAADIAAPRADSRRRRRSPAAKAKAKQHLYVVLTDRKDACAIHKLDIDGGSGGVDNGHLMNAGGGMASPKTLPRLPEPPLLRLQSPTVHPCSKFTTVGSSIVTMGEYFSDDYYDSDCCPEARGNTLVYDTKTAALTVVRHLPEGLVVGVSHYVAAIVAGDNRLYVFDATTVDDYHDGVVGGMHCFRLTDDDGSRKKKERWSWRHPDASTPISWSYDPSHLPFDAITGKIEAYAVHPEGRTFFVSVRKLFRRVPGAVDDEGTFSYSVESGAWTRRGGWMLPFVGHGHYDGELGSWVGLHHSDDDDGRLSACRVVSARQRRAPSEVQGSF</aaseq>

Gene Sequence

<dnaseqindica>1..1134#6211..6222#ATGTGGCGGCCGATTCTTCTCCAGCCTCGCCGCACTCTCCTCTCCCATCTCCGGCGCCGTGGCCACGACGCGACCGACGACGACAAGGCGGTTCTTCGCCTCCGCTGCCTGATTGGCTCACGGGGCTACGCCTCCTCCTCCGATGCCACCAACGCCGCCGCCGCCGCCGACATCGCGGCACCTCGAGCTGACAGCAGGAGGCGGCGGCGTTCACCGGCGGCGAAGGCGAAGGCGAAGCAGCATCTGTACGTCGTGCTGACTGACCGGAAGGACGCGTGCGCCATCCACAAGCTGGACATCGACGGCGGTAGCGGTGGCGTCGACAACGGCCACCTGATGAACGCCGGCGGCGGCATGGCTTCACCGAAGACCCTCCCGCGGCTCCCCGAGCCGCCGCTCCTCCGGCTGCAGAGCCCCACAGTCCACCCATGCTCCAAGTTCACCACCGTCGGCAGCAGCATCGTCACCATGGGCGAGTATTTCAGCGATGATTATTACGACAGCGATTGTTGTCCCGAAGCCAGAGGGAACACCCTTGTCTACGACACCAAGACGGCGGCGCTCACCGTCGTGCGCCACCTCCCAGAAGGCCTTGTTGTTGGTGTCTCCCACTACGTGGCCGCCATTGTCGCCGGCGACAACAGGCTGTACGTGTTCGATGCGACCACGGTGGACGACTACCATGACGGAGTCGTTGGAGGCATGCACTGCTTTAGACTGACCGACGACGACGGTTCGAGGAAGAAGAAAGAGCGGTGGTCATGGCGGCACCCGGACGCCTCCACGCCCATCTCGTGGAGCTACGACCCGTCCCATCTCCCGTTCGACGCCATCACCGGCAAAATCGAGGCGTACGCCGTCCACCCGGAAGGACGGACCTTCTTCGTGTCCGTGCGGAAGCTGTTCCGCCGCGTGCCCGGCGCCGTGGACGACGAGGGTACCTTCTCCTACAGCGTCGAGAGCGGCGCGTGGACGCGCCGCGGGGGATGGATGCTGCCGTTCGTCGGCCACGGCCACTACGACGGCGAGCTCGGCTCGTGGGTCGGCCTCCATCATAGCGACGACGATGACGGGCGCCTCTCCGCCTGCCGCGTCGTGTCCGCCAGACAGCGCCGCGCGCCGTCGGAGGTGCAGGTCAGCAAGGAGAAGGTGTCACTGGTGGAGAAAGCGTTTATAGTCCCGGTTCGTAACCCCCCTTTAGTCCCGGTTTCTAAACCGGGACTACCAATCCGGGACTAAAGATTGCTATTTTAGTCTCTGGTGAAATAACCGGGACTAAAGATCGATATTTAGTCCCGGTTGGTATGGGTCAGCCACGTGGCCGGCTGAGCCATCTTTTCTCCCGGTTGGTGTTATCAACCGGGACTAAAGATCGAGCTGACCTTTTTTTTTTTCATGGCCCTGTTGTTGCATGGTTTATATATATATATCTATAAACCATGCATATATATATATGACCAAAATATATATTTACATTATAGAAAGTGTGTACACATGCATATAAAAACATAGTCATGTATTAATTACAATCCATTATATATCCTAGCTAGCTACGATTTCGACGTAGTAGTAGTCGCTATCTCAAAAGCTAAGAACCTATGAATTGTGTTTCCGTTGTAGTAGAATTCACCCTTGGGATTAAGAATTTGTTCGTTGATGAATCCCATGAGTTGTTCTTGAACCACCGCGATAAATTCCTTGTGTGTGATCAGGTTATCCCTCATGCGAATAAACTATATGAATGTATGAAATTTATTAGTAATTAAACAACAAATCGATACGTAATGAAATTTTGAATTTATTTGTACGTACATCGAGCTCTCTTGTGGTGATGATTTAGTCTGCAAGGCAGTGGCAATACTCGCACACGTAGTAGCCGCACAAGTTAGTTCCCTGCTTTTGCTTTGCGCACTATAAATAAAAGACAAACGACGAGAGATCTAATTAATATACACTTGTATGTATTTTAATTGGAGAAATATAAATGTAGAGCATGTGTACTCACAGGAAATTTAAACTTCCGCCTAAGTCTTTCTCTCCAGTTGCTGCGGACTAAATGACGGAACCGATACCAAGCCCTACATGGAGTTTAAAGCTATGATTCGTAGTAGCAATTAACATAACAAGATTTTCTTAACTAACATAGGAACTTATGACAGTACATGTCTATAAGTTCGAAAACCTTATCAAACGTAGACTCTTTTTTATCCATTGAGTCATATACGTTGACGGTGCAGGCCTCCAGTTCGAAGTGTAAAAGCACCCAGTGGAATCTGCAATCTGCGTGGGATGCATTACATATGAAACACTTAGCAAGTTCATACAGGAATGAAATTTGGTATAGGAAGACAGTAAAATTAAACTAACTCTGTGTTGTACGGCAACAGTATGAACGTCTTGTAATGCTACGCCTTCAGGAGATGGACGAGATTGTCCTCTGTGGCTTGCGGATATTCGTCGAGCATTGCGACGTTTACTTTCCGAGGGTCGATGAATCCAGTATCGAAAACCCCCTGCCATCGGGCCCTTTGAATCTCCATTCTACAACGATAAGGGGAGTATATATTATATATAGTCTACTTATATACAAGGACCTAATTACTTAAAGGAGACGTAGTAAGAAATCTAATTGAACGATATACTTACAAAATCCAGCAACTCATAATAGAGACGTCGAGGGCGTCCAGCTAGTATAGTTCGTAGATTCCCTTGAAATTGATCCAGAGAATGTCATATCCTCGCAAGAAGTCCGTGTCCCTGATCCTCGCTCCGATCATCTCTCTACCGGTGGCGCTCATCTCCATGTACAGCTGATGGAACTTGTACATTTGTGTGGGTAGGGACTGCAGCAGCTCAGGCTTGACAAGCGGTTTACCGAGTTCGTAGATGTATTTCACTTCCGCCTTTTCGATTGGTGCGTCTCCTAGCAATTGATCCGTAGTTAGCCCGGTGTCATTAATAAATTCTTGTATTCCAAAATCTTCACCGGTCAGCAACGGCTCGATCTCCTGGTTTGGTTGCTTTCCAAGCTGAGGGACTGGTTTGGACTTTCCAGAAGATGCTTTCTTGAGCATTCGCTCATAGTCCGATAGCTTTATGGCCTCCTTGGCAGGTGCAGACATACCCCTGAAGAAGTTCCTGACACTCGGGTCTATAGGAATCTTCTTTACTGGACTTCGAGGCTTGAATTGTCTCTTGACTTCTGATGCCACGTAAGCGTCAAGCTCCTCTTGCGTGCAATCGTATCCCGGGTCCTTGTTCTTGGCGGCGTCAACTTTCGCCTTCTTCGTTGCCCTTGTGGGGGCAGGCGGTGGAGCTTGGGGGGCCCTTGACTTGGAAGGTGCCAGAAGAGGAGCTTGCGGAGGAGTCGGTGCAGGAGCCTGAGGAGGAGTCGGTGCAGGAGCCTGAGGTGTAGACGGTGCAGGAGCCTGAGGAGGAGATGGCGGAGCCGGAGGAGATGGTGCACGAGACGCCGCTTGTCGCCCAGGGAGGATGATGTACCGCTTGCGCCATAGAATAATGGCGTGGCTTGTGTCTCGTAGATGCGTCTCACCGTCTCCTCCAGGGTAATCCAGCTTGAGGTCCTCGTGTGCGCCTTCGACCAACTCAAGTTCGACCTTGGAGTATCCTACTGGAATCGACCTGCAATGGTAAGTACCTGAAAGGTCTGTTGGGATGGCCATGCCCGATGCCACCTTCATGTGGTGAGAGGTTATTTATTAGAAATCAACATATATAAGCAGCAACTAGCGGAATGGCCAAATCTAAAATCTATAAACTACGAGCTTACCTTTATTGATAAGTTCTTGAAAGGAATATGCAGCTCACATGGTGTCCGCTGAGTGATGTCATCAACGGGGCAGGTGGATTCGTCCTGGGTTTGCATGGCGTCCATGCTCTGTGATCCTACCTGCCCCGTTGAGGCGCAGCTGCTATGGTTTCCTGACGGGCTCACCATTGCAGGAGGAATGGTCGGCTGGGGATCATGGGACCGATGTGCGGCCATGCGTTCATCAACCTTCCTTGCCACCTCCTCTTGCATGCTGAGCTCGTAGCTCGATACCCTGAACTCTAGATCTGCAATCTTCGCCTCGGTATCTCTCTTGCTTCTCATCCGACTCCTGTACGTGTGGATGTCCTCCTTGAACCCAATCTTCCAAGGAATCACCCCTTTCCCTCGTGTTCGTCCTGGATGCTCTGCAGTCTGCAGGGCGAGTGACAGCTCATCCTTCTCTCTGTCCGGTCGGAACGTGCCCTAAGAAGAGGCTTCCACTGCGTCTGTTAGTTGATGCGCAGCCTCGCGTATCTGATCGCTGAAGACTAGGGAGCCATCAGCTGGGTTGAGCGTTCCACGTGAGCATAGTACCAGAACTTCGATCGTTCCGGCCAATTAGCGGTGGCCGGTTCGATACCCCTCTCAAGCAAGCTAGCCTCCATCTCCTCCCACTTCGGCATCACGACGCTATAGCCGCCTGACCCCAAGTGGTGATGGTACTTCTTCTTGGCGGCATTTTCTTTGTTTCTTTCCATCATCGCCTGCCCTTGTTCACCTGCCTTATATGCAACGAACTCGTCCTAGTGATCCCTTAGCTTCGAGAATGTGTCGAAGTTCGGTGTCTGCCCCTTCATGATATATTTCTGGTACACATCTCCCTTGAAGCTCTGAAACTGTTCTGCCATTTTCTTCAGAGTCTACCTTTTCACTTTGTCCTCTGTACCCGCGGGAAGGGTGAATGTCTCGAGCATTGTGGTCCACAGCATCTCTTTCTCCGAATCTGGGACAAAGCTCTAATGATCTCCGCGTGCCCTTGTTCTGCGCCAGTACACCGTACTGACAGGCACGTTATCCCACACAACCCAACCGCTGTGACGTACATAGTTCTTGGCGGCTTCTGCCGGGGCACTAGGTCGGCCGTCTTCGTCCATTTCCGTTATGATGTGTCGACCCTCAAGCTTCTTCGCGGCACCTCGTTGCCCGCGTGCCCTCCTCTGTCCAACGGGGGGTTGACTTCCACTAACCTCCTCCTCCTAGTTCCCCTCCACATCCCTTTCCATGTGCCCCTCCTGGTTCCCCTCCGCATCCCTCTCCACGTTCCCTTCCTCATTCAAATACTGGTTTGGATCCTCGTTCCCCTCTTCTTCATTCCAGTACTGGCTACTTCCCTCCACGATTGTATTGTACAATATCTGTTCCTCATCGCGATCAGCCATCTGTTCATACAGGAAACATCTGCTAAGTCATGAGACATTTATGTTTTAACAATCTTATATGCTAACAATCATATGCTAAGTCTAGGTGACGTATATTATAGGACCCTAGCTAGTCAATAAATTATATAGTAAGTCTAATTTATCACTGTTTGAGTTTTAGTATAAGATTAGGTCGGTCGTCTTCGTCCACTTCTGTTATGATGTGTCGACCCTCAAGCTTCTTCGTGGCACCTCGTTGCCCGCGTGCCCTCTTCTATCCAACAGAGGGTTGACTTCCACTGGCCTCCTCCTCCTAGTTCCCCTCCACATCCCTTTCCACGTGCCCCTCCCGGTTCCCCTCCGCATCCCTCTCCATGTTCCCTTCCTTGTTCAAATACTGGTTTGGATCCTTGTTCCCTCTTCTTCGTTCCAGTACTGGCTACTTCCCTCCGCGATTGTATCATACAATATCTGTTCCTCATCGCGATCAGCCATCTGTTCATACAGGAAACATCTGCTAAGTCATGAGACATTTATGTTTTAACAATCTTATATGCTAACAATCATATGCTAAGTCTAGGTGACGTATATTATAGGACCCTAGCTAGTCAATAAATTATATAGTAAGTCTAATTTCAAATCTAATAATCTTATACTAAAACTCAAATAGTGATAAATGCTAAGTCTAGGTGACGTATATTATAGGACCCTAGCTAGTCAATAATTATATACTAAGTCTAATTACAAATATAATAATCTTATATTAAACTCAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTTCTTAATTTTTTTAATAGTAGTGCTGCCACGTGGACGGCACATCAGCGAAAACCGTCTTAATAAAAAGGAGAGAGCGATTTTAATAGTTGGGGTTATCATTATACCCCGAGTTTTATGATCGAGGGAGATGAATGAGATCTGACCATTAGTTAAGGGAGTCAAAGTGAACTTATTCCTCTATCAGCAGGGTTCGTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013216