BGIOSGA013223

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Revision as of 09:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013223| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013223, complete gene.| tag = OsJ_119...")
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Gene Name

BGIOSGA013223

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013223, complete gene.

LocusTag

OsJ_11917

Ensembl Transcript ID

BGIOSGA013223-TA

Ensembl Protein ID

BGIOSGA013223-PA

Length

9158

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29052101..29061258

Sequence Coding Region

29052101..29052175,29055868..29055990,29057358..29057484,29060301..29060349,29060509..29060584
,29061148..29061258

Genome Context

<gbrowseImage1> name=IndicaChromosome03:29052101..29061258 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:29052101..29061258 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCACAGATCGTGCCGGCGCCGGAGCATGTGTGCTACGTGCACTGCAACTTCTGCAACACAATTTTCGCGGTCAGTGTTCCAAGCAATAGCATGCTAAACATCGTGACCGTCCGTTGTGGCCATTGCACTAGCCTGTTGTCAGTGAACTTGCGAGGATTGGTCCAAGCACTCCCAGCAGAAGATCATTTACAGGACAATTTGAAGATGCACAATATGAGCTTCCGCGAAAACTACTCTGAATATGGCTCATCTTCCAGATATGGCCGAGTGCCAATGATGTTCTCAAAAAATGACACAGAGCATATGCTGCACGTGCGACCTCCAGAGAAGAGGCAGCGGGTTCCTTCAGCTTATAACAGATTTATCAAGGAAGAGATCCGGAGGATAAAAGCAAACAATCCTGACATAAGCCACAGAGAAGCCTTCAGTACTGCAGCAAAGAATTGGGCGCATTTCCCGAACATCCATTTCGGGTTAGGCTCCCATGAGAGCAGCAAGAAGCTCGATGAGGCCATTGGAGCTCCTAGTCCCCAAAAGGTTCAAAGGCTGTATTGA</cdnaseq>

Protein Sequence

<aaseq>MSAQIVPAPEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHLQDNLKMHNMSFRENYSEYGSSSRYGRVPMMFSKNDTEHMLHVRPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIHFGLGSHESSKKLDEAIGAPSPQKVQRLY</aaseq>

Gene Sequence

<dnaseqindica>1..75#3768..3890#5258..5384#8201..8249#8409..8484#9048..9158#ATGTCGGCACAGATCGTGCCGGCGCCGGAGCATGTGTGCTACGTGCACTGCAACTTCTGCAACACAATTTTCGCGGTAATTTGTCTGAATTGTTGATCCCTTTCTCCTTCTCTCTCTCTCTCTCCCCTTCCTTGATTTCCTTGCCTCCTCTTTTCTACATGAAGTTTCTTTTCTTTTTTGGGGGGGAACTCTCGATGAAGGTGCAGATCTACAAGGGAGATCGATGCATATATGAGATGATTGGTTGCTTGGCTTTTCTTTAGAATTGTGTATGATTTGGGCAGTTCATTTGCGTGATTTCTTTAATTTTTAATTTGTGCGAAAAGATGTGTGTCATGCTGCCAAGAGATTGGGTTTCGATATATATGTTACTTTTTTTTTACCCAATTACCCTTCGTTTTCTTTCTTTAATTGTCGACAGAGTTCAGATAGCTTCACCTCCTTTCCTTTTCGACTCATTAAAACTCTGGTCCGGTTTTCTCTGAAAGAGAGCTTGTCGACCCTAATTTTTTGATTTAGTCTACCATGGAGTCATGGGCATGATTACATATGAATGGGAAAAAGGGCAAAGGTCATGATGATCTTGAGAATTGAGCTGCTTCTCTCTCTTTGCACCATTTTGTGTCGTTTGATTATATGGGTTCATGAATTATTTGGGCGAGTTGATGAACTTCAATTAACTGGTACGTACTAGAGTAGCTAGCTCTAGATCATCCTTGTTTTCTCTCTCGACTCTTAATTTCCTTCAGAACCTAGCGTAGCTGATGCTAGATCGATCTTACGTACATATGAAGTGCAGTTGATTTTCTTGCCGGTCGACTGGTACTTTATATGGCTACCATATATAAGAGTATCGTCGTTTCAGGTGTTATTACTAGTAATCGAATTGCTACAAATTAAAGAGCATGCAATAATAACCCATAACTTTAATTAGTATATGCAACTACTGTGTATAATGTTCTCCTGCTTGCCTCTTAGATCGATCATCTTTTAAAATCCACTTGCTCATCCCCTCTAAGCACAAATACAGCATCTGAAGGACTCAGAAACGGCAACCTCTCGAAGTACTGTACTGTGTTACAAGAATTAAGGTGCAAATTGCATCAATAATTCCTGTACGTACGTGTTCCCGTGCTAGCTGTTCCACTCATTCGTTCTTCCCGTGCTATATCTTGGCTTTCTTGATGGTTTCTCTTTCTTTTTTTTCTTTTCTTTTTGGTGCAATGCATGGTACGAGTTTAAGGACTAAGTACAAATAACTAGAAATATGTAATTAAAATGAAGCAGAAGCGGTAACCATAAGGCAAAAGGATTATTTACGTCCTTCCGAAAAAAAAATTGTGGTTTGAGCTTGAGCTAGCTTCTTCTCCTTCCTCCTCTTCTTCTTCTTTTTTTTTTTTTTGAGAGAGAGAGAGATGCTTGAGATGGCATGGCCGGCTAGCTTCACTCAATACATGCAAGGGAATTAGATCAGTCCTTATATATAGACTGTAGTTATCAGTGATGTGTTGAACTGGTCTGAATGGTGTTTTAACTAGCTAATCCCCATGTTGAACTCATATATATATATATATATATATACACTATCAGGAATTCGTATAAACATTTTCTCTCTCTATTTTTTTTCTGTTTCCCACTTCTTCTTGGATCTTGCCCTGCTCTGTTTGGAAGTACACGCTGCTAGACTAGTGATATGATATGATCGATTCCCCTCAGTCAGTCAGTCAGTCTGATCTGCATGGGCGGCGAGAGTGCTACGAGATATCTCAAATTCGTCCACACACACCATAATAAATCGTCTCTAGTTTCGCCTACGGTTCTCAATGAATTGAAGTATATATATATCTTTATGTATAGTGCATATCAATTATTCTTGTTGATTAATTAGTTAGTTCCGTTCGACTCTCGACATGTTAACTTCTTGGCACAATTACATGCATACAGTCTTTATATAGGAGTATATATATCTTGTTGATCTGCGCTACTTGCATGCTTCAATATATCTTTCAGACTTTTAGAAGAGAAATTATATTCCTTATCTCTGAAGTCTAAATAGCTACTGTAGTTTGTAAGAACTTTATTGGAGGCCATCTTTTACTCCATCTCAATCTCTCCTACTCCCTCCAGAAAGATAATCAAAATAAGCGCATTTGGGAACAAATATAGCTAGTGACCATTAATGAGAGTCGGGCCCAAACAATTCAAGTATTGTAAATACCATAACAGCAAAAAGTAGAATACACCAAAATGAGTCTATTACCAGTTCCAGGAAGAGCACACCAAATGACAGAAACTATTACTCAATCCCAAAACAAATTAATTTTTACTATAGCTAATTAGCTATGAACTTGGAAAGTAGTGACCGGGATATAGAGAGTGTACACGCCAACGACAAATGCAGAGCCGTACGTACTGACTTCCTGCATCTACATCACCAACTGTAATGTCAATTGCTGAGGCGTAGTACACATGTCTAGTGTAGATAGTACATGTATAGCTACATATGCATCCATGCATGATCTTTCACAAGATCTTACCAGCATGTCTCAACTTTACTACTGCAACTCCAATACTTATATATGTATGTCTTCTTGCTCTCTCCTACCGAAAGATGAAAAAAAGGGGATTGAATCATCTTGTGCATTGCATGACCCACACTTAAATGTACTCCCTCCATCCAAAAAAAACTCAACCAACCCTCCTAAGACAACGAATCTGGACAAAAGATAGTCCAGATTCATTTTTTTTTGACAGAGGGAGTACCCACACAAACACACATGCAGGAGAGGAGATGTTGTGCTTGAGAGTGAATTGGCTTCTGCATGAAGGGTCACTGTCTCTAGCTAGCACCTTTCTTTCCTGCACTGTTCATGCATGTAGCTGAAGGCTTTGTGATTTCCTACTACTGCTACTACTACTCTGTGGAGAGGCCAGACAGAGGCATGACATGACATACCATGCAAATGCATGGCTTCTTCCTTTAAAAAAGTCACCAAGAGATATGTTGTGAGGTTGTTTGCTTCTGTCACAACCAACTACTAGCAGCTAGCCCTTTTGTGCTAGATATGTGTGGAGTGAAGTGTGATTTGAGCTAACTCCCCTCATGGGAGCACACACAATCATTCTCATTCAGTCACTTTGCTTAATTATTTCTTTCTTCTTTCTTATGGGAGTGAGTGCCCAAAAAGTGAGTGAATGTAGGGAATCAAACAAAGTAGAGGTACTGTGCTCTTCAGGTTTGGGAAGAAAAATGGGAACGGCAAGGGACCAATGTGTGCAGGCATTGGAAAAGGGTGCCCCCAATTCTGATCTGATCAGATATATATTCAGATCAGCAGAGCCCCTGATAAAAGTCATGGAGGAACAGTTATCCACATCTAAAGCTATAGCTGTGTATTAATGTGTATCTGCAGTCTACACCAGCCTTATGAAACATGCATGCATGCATGCATGCCTTTGAGATTTGATTTTTTACTTCTCAGATTCTTTTGTACAAATGCAAAAAGAAAATGATCCTTTGGAATCTAGCATTTGTTACATATTTACAATATAAAGTGCTATACTTGTTTACTTTTCATTCTACTTGTTCCAGCACATGCATATGTAATTGTACACCTGCTCAAATTTACAATGAGTGGCATATATATTATACATATTAATTACGGCTTACTTGTATTTCTTCCATAAAAAAACATGTCTAGAATATTTCTTTTCTTGACAGTAAATATTCAGGACATATTATACTGATTCTTGGAATCAATCTACAGGTCAGTGTTCCAAGCAATAGCATGCTAAACATCGTGACCGTCCGTTGTGGCCATTGCACTAGCCTGTTGTCAGTGAACTTGCGAGGATTGGTCCAAGCACTCCCAGCAGAAGATCATTTACAGGTTGACACATCAATACATACTACTCTTTCATGCATGAAATTATGGATACAGATACAATGACTACATTAAATCATATTATCTCTTTTTAATAAAAAAAACACACATATGTTGCCTATATATATCTAGAATCCAAATTAATGGCACTTTTCAATCATAACCATTGCTACTGCATGCTTAGTCTGATAGAGCTAGAAATCAAAGAACAATTAATGTATATGTACCGGAGCATTCTTCACATACCCAGCTGGAAAAAAAATCACATGCAGATCGATGTATGTTAAACTACCCTATATATGTCGAAGTAGTATAGTACTACTAGTATATGTAGATAACTACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCTCACATTTATACTGATGTTAATAAATCTAGACATATATATCTATCTAGATTCATTAGCATCAATGTAAATGTGAGAAATGCTAGAATGACTTACATTGTGAAACAGATGAAGTAGATTTTACTCACAGAGAAAAACGGAAAAGACACCATGCAATGCATGCATGGGTCATCTCAAGCTTGAATACTTTACATGTACAGCAGAGACAAATTAAAGCATTGCACTATTTACTCACAGGAAAGAATTTTAAAGCTCTTGCACATGCCAAAATATATACTAGGAGTACCAAGCCATATGGCTAGATCAGCTAGCTAGCTCAGGTTGCTCAGCTGATCTTATACTACATGACTTGTGCCCCTTTGTCAAACCCTGCAGGGTTATTCCCCGCAAAAAAAAATAATAACAAATCCTGTAGGGTTATTGATAAATACTAGTAGATGTTTTGCATTTGTTTTTATATGCTACTATATATAATGGAAAAAATCCTGCCACACAAGTACTCGAATTAAATTTCCAATATGAAAAGCACGAATTTCGAATTCCGGCAATAACTACATGTTAGGTTTGATATACTCCCTCCGTCAGTAAGGGTGTGTTTAGTTCACGCTAAAATTGGAAGTTTGATTGAAATTGAAAAGATGTGACGGAAAAGATGGAAGTTTGTGTGTGTAGGAAAGTTTTGATGTGATGGAAAAGTTGAAAGTTTGAAAAAAAAAGTTTGGAACTAAACTCGGCCTAAATATGAGGGATACGTTACTATAGAATGTACAAAATTGATTCGCCAAATTCATGTTTAGAGATTTTCATGTTTGCTTCACAAAACAATCAAAAGCCATACAGATTTTTCGAAATGATCTGAACAGTAACCACCAATGTTTTACTTAATTTTCTTGTCTTGACTTGGTTATAATTTCCATGTAAATACACACTAAGTAGCATCTAGAGGAAAAATGTGTGACTTTAAGTTGATTAACTTGCTTCTTACATTTTCCTCAGGACAATTTGAAGATGCACAATATGAGCTTCCGCGAAAACTACTCTGAATATGGCTCATCTTCCAGATATGGCCGAGTGCCAATGATGTTCTCAAAAAATGACACAGAGCATATGCTGCACGTGCGACGTAAGACAATGCATATGAACCTGCATAATAAATTTAGTGTACATGTGCGACGGAGCCATATTTCTAGAGATTATTGATTTTACTATATGAAGCAATATAAAGGTATACAAATGCTAGGGGAATATTGCATATATTCACATATACATGCTGGGTGCATATACCACTTTTCTTCTCCAAACCCTTTTTATCTTTGTTGTTTTGCTCAGACAACTGGGGTACGTGTGTTACTTCTTAATTAACACAAATACATGTATAGAGAAATTATACTGGCTTAATCAATTCCTGAGTTATGCACCTTTTTTTAAACAGATATATTTAGAAAATTCGACGAGGGATAAAGCTCTACTAAAAAGTCAGAAAAATAGAAAATTTAAACAAGTTGCATTGATTCAGCTAGAGGTGGATAATAAACTAGCTAGGCTCACAAGCTGGCTTGTTAAGCTCGAGTTTTATATCAATTTAACATGTATTAATCTATTATATGTTCACATAATAGTAAACACTACTCCCTCTGTTTCATATTAAAGTCGTTTCATATTATAAGTTATTTTGATTTTATAAAAAAAGTCGTTTTGATTGTTTTCCTAGCTAGTCAAAGTAATTTAAGTATGACCAAGTTTACAGAAATATATAGTAACATTTCTAATACAGAACAAACATATTAAAACATATTCAATGCTAGATTTAATATAACTAATTTGGTGTTTTAAGTGTTGCAAAAGGTTTCTATAAATTTAATCAAAACTTTAAAAAATTTTGACTAGAAAAAGTCAAAATGACTTATTACGTGAAACGGAGGAAGAGTAACTAGTAAAGTACTAACTAGACATGAAAAGTTTGAAAGTAATTTCAAGAAGTATTATCCATAGTATAAGTATTGACTAATAGGCACTCGGTATATATGGAAAATATGGTGTGTCTAGTTAAGCTAACAAGCTAAAAATCCATCTCACGAGTTCGAGTCGATCAGCCAAGCCACAAGCTTTGAGTTTTTTTCCCCAACCCTAGCTAGGCTTAGGCCCTCTTTGTTTAGGCTTATAAGCTAACTTATAAGTCGAAAAGTCTAAGCCTAAACAAACAAACAGCTTTTCTGTTTGGCTTTTTTGAAGCCATAAGCCACTCTAACACTATTAAGCCAAAAGCTAGGTTGGAGAAGCTTTTTTGTCTTATGTGAGATAGATGTATGACTCAACTACTAAACTTAGGACATTAAATCCACCGGCTTATAAATCATATAAGCCAATAAGCTGACTTAAAAGTCTAGGCCAATAAGCTTAAGCCTAAACAAAAAGGCGCGTCTGCTGTTATTGATCAGGTTGAGTTCTGTTAAAGTTTATGGTCCCCATCGCTTGGCTTATTTCCTAATAAGCCAAAACGGCTTATTAGGAAATAAAAATGAATTTTTAGGTAAAACTTTTATAATTGTGTTTTTGGTGACTTAAAAGCCAATGTTGAAAAAGAAACTACGTTGAAAATATCTCAAAATCAATCTCAAAATTAAGCTTGAAAATTCAAATTTTGGCTTTTTCTTTAGCTGATTAGGCCATCCGATAGGAGCCATCCGATAGGAGCCTATACTGGGCTGTATATAGAAATTATTCTTATATGAATTAATGAATGAAACGAGATGTGCATGTGTGCGTGAGTTCTAGCTAGTAGCTAGTACCATGCATGGTTCGGTTAAAGATTTTTCCGTGCGGTCAAAATGCATTTTTCAGTGCGGAGGTCCCGCCCGACTGTACCCTGCATGTCTGCGAAAATCCATATTTTCACGTGCGGGCGGCCTAACCGCATGAGATAATCCATCTTCCCGTGCGGTCGGGTTAAGTAGACCACACGGGATAATCGATTATCCCGTGCGGTCAAATTATACCGCCCGCACGCAAAAAAAACTGAAAAAAAAAATAAAATCAAAAACACTAACCCTAACCCTAGAAATCTAGAATCGCCCGCTGCCGCCGCTCGTGTTCGCCATCGTCCTCATGTCGTCGTCGTGGTCGCACCGTCGCCGCTCTCATCGTCGTCGTTGTGGTCGCGCTGCCGCCGCTCCTGGCCGCCGTCACTGCTCCCGGTTGCCAGCACGGCGCGGATCCGACCGGTCACCCACCGCGCTGTCTCCGCCAGCAGCCGTCGTGCCGCCCGCTCCCGGCCGCCGCCTCGTTGGCGGCAAGCCGGGCAACTCCCGCGCCCCGTGCGCTCGGTGGGGAGGGGAGGAGCTAGAGGAAAGGCAGAGAGAGAGAGGAGTGATTGAGGGTGAATAAAAGGGAAAATGAATAGAGAAGATGAAAAATTTAAAGTGAGTAAGAGAGAAAAGAGGGAGAGGTATTTTTGCGTGCGGTCCACTTAAGAGGCCCGCACGCGAAAATCGGTTTTCGCGTGCGGGCCTCTTAAGGGTCAACACGCAAAAATAGGCTTATTTTTGCGTGCGGACCGTTAAGAGGCCTGTCTGCGAAAATCGATTTTTGCGTGCGGGTCTCTTAAGAGTCCGCACGCGAAAATGGGAGGCCAATTTCTGCAGACGCGCGCGAAAACGGTCCGTCTGGGAAAATGGAAGCTCCTTGTCCAGAAAAATGTTTTGTGTACTTGTATATATTTGAAAATACTGATGCATGAACTAGCTACTTGAGTACTATTTCATTTTGTGAGCCCAAAAATATTGACGTACGAACTACTTGACTACTACGTACTCCTATTAATTTCTTGAAAAACCTAGGAGTAGTATACATACTCTCAAGAGTATGTGCTTTAGATAGTAATTAAACAGTATCTGGATGCTTATACTTTTTTTTTACAAATCTTTTTCATACAACTTGCAGCTCCAGAGAAGAGGCAGCGGGTTCCTTCAGCTTATAACAGATTTATCAAGTGAGTTTGATCTCGAGACAATTCGATCGATCCATATATATATATAGATCGTCTAGACAGCTTATAACATCTGAGAGTTTTCAGATAATTGATATAAATCTGCCGTATTCTATACTAAGTGAGTGTTTGATTTTGACACCCACTAATATATCACTACAGGGAAGAGATCCGGAGGATAAAAGCAAACAATCCTGACATAAGCCACAGAGAAGCCTTCAGTACTGCAGCAAAGAATGTTAGTACATGTGTAGCTAGGGGAAACAAATTACTATCTTAATTACTTTTACATATACTGATATAATAGCTGTTCTTTTTTTTACTACAAACTATAATGCAAATTCTCACACACTTTGGCCTGGTTTAGTTTCCAACTTTTTCTTCAAACTTCCAACTTTTCCATCACATCGTTCCAATTTTAACTAAACTTCTAATTTTAGCGTGAACTAAACACACCCTTGATCATTGCTGAATATATATTGATAGAAGTATGTGAGCCATATACATAGAGTTACATATCATCAATACTACATATTGTTGACTTTGTATGTCACTGCTAGCAAGATATTAAATCCATGGCAATTGCCATTTGCTTAATACTCTTATACATATAGTAATGTCCATATTGATCACTGAATACTCAGTCTATATGAATTTAATTTATATAACATATTCGTAAAAAAAAATAGTGGTCAAAGTTATATATTTAAGACCATGTCATCGTCTAAACCATCATCTACTTCTGACTAGAGGGAGTAACTCTCATCTCATATGCATCCTACTTTTTTTTTTTTTTTGCAGTGGGCGCATTTCCCGAACATCCATTTCGGGTTAGGCTCCCATGAGAGCAGCAAGAAGCTCGATGAGGCCATTGGAGCTCCTAGTCCCCAAAAGGTTCAAAGGCTGTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013223