BGIOSGA013259

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Revision as of 09:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013259| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013259, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013259

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013259, complete gene.

LocusTag

OSJNBA0034D21.13

Ensembl Transcript ID

BGIOSGA013259-TA

Ensembl Protein ID

BGIOSGA013259-PA

Length

3653

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29949180..29952832

Sequence Coding Region

29949180..29949209,29949320..29949407,29949711..29949776,29949912..29949999,29950094..29950198
,29950321..29950815,29950980..29951115,29951342..29951535,29951646..29951754
,29951910..29952021,29952485..29952564,29952728..29952832

Genome Context

<gbrowseImage1> name=IndicaChromosome03:29949180..29952832 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:29949180..29952832 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGAGATGAGAATTCAATCAAGACCAAGCTATCCTGGTCCAAGACCTTTGTTAGGAAGTGGTTCAACATCAAAACAAAAGCCAAGGACTTCCATTCAGATTATGCAGTTGAAGAAGTAGGTGTCCAGTGGAGAACCAGTTTCTCAGAGAGAGATGTATGCAAATCCAAGAAAAGCAGAACAGAGAGGTTGCCTAGGAAGAGTGTGGATCGAGATTCCCGGGTAGGAAATGGATTTGACCGTGCTTATATCACAAATACACAAGACTACAGGGTCTTTGTTGCAACATGGAATGTGGGTGGAAGGTCACCATCGAGTCATTTGAATTTGGAAGACTGGCTTCATACTTCTCCGGCTGCTGATATATATGTCATTGGGTTACAGGAAATTGTTCCTTTGAATGCTGGCAATGTCCTATTGACCGAAGACAATGGTCCAGCAAAGAAATGGGTCGCACTTGTTAGAAAAACGCTAAACAATATAGACCAAGGCTCTGTTGTGTACAACTACCACACCCCTTCGCCGGTTCCAGATCCTATTGTTGAGCTCAATGTTGATTTTGAACGATCATCAAGAAGACCAAGGAATTCATCTTTCTTCCATCGACGTTCATTCCAGTCCTTCAACCGAAGCTCAAGAATTGACATGATGGATCCCCACTCATTAGTGGATCGTCGTTTCAGTGTTTGTGACCGGATTAGCTTTGGGAGTAGGCCAAGTGATGTTGACACCAGTATGAGATATGGTGGGTCATCTGATGATGAGAATATTGACGAGGAATCACCTAGTGGTATATACATCTCACCAATGCCATACGGTTATGGTGCTCCACTATGCTATGATGATAACAAAAGACAGTTGATAAACACTAGATATTGCCTAGTTGCCAGCAAGCAAATGGTTGGTGTTTTTCTCATGGTTTGGGTACGAAGTGATATAAGGGAACATGTGAAGAACTTGAAGGTTTCATGTGTTGGCAGAGGTTTGATGGGATATCTCGGAAATAAGGGATCGATATCAATCAGCATGTCTCTGCATCAGACAAGCTTCTGCTTTGTTTGCACTCACTTGACCTCAGGGCAAAAGGACGGTGATGAACTTAGAAGAAATGCAGATGTTGTAGAAATTTTGAGGAAGACCAGATTCCCACATGTCCATGGTGTAGGTGACGAGAAGTCACCGGAGACAATTCTTGACCATGATCGTATAATATGGCTTGGGGATCTTAATTACCGAATAGCTCTTTCATACCGTTCGGTGAAGGCTCTAGTTGAGATGCACAATTGGAAACAGTTACTAGAGAAGGACCAGGCTGGAAAGAAGGGAGGATTTATTTTCCTCCCACATACAAATACTCCTACAATTCTGACAGATACGCAGGCGACGATATGCGTCCGAATGAGAAGCGAAGAACACCTGCATGACATTCTTCAGTCCCAGAATACACCAGATGAACTTCATTTCTCCCAAGATTCCAGCAATTGGAATATTGTCAGCCAACAGATACTCAAGGAGATGCTTTCTAATTGTAAAATTAGGTATGTTCTACAAGACTGCTTGTACATCACTACCATATGTGTGATTAGTACAGATAAATTGAATGACTAA</cdnaseq>

Protein Sequence

<aaseq>MRDENSIKTKLSWSKTFVRKWFNIKTKAKDFHSDYAVEEVGVQWRTSFSERDVCKSKKSRTERLPRKSVDRDSRVGNGFDRAYITNTQDYRVFVATWNVGGRSPSSHLNLEDWLHTSPAADIYVIGLQEIVPLNAGNVLLTEDNGPAKKWVALVRKTLNNIDQGSVVYNYHTPSPVPDPIVELNVDFERSSRRPRNSSFFHRRSFQSFNRSSRIDMMDPHSLVDRRFSVCDRISFGSRPSDVDTSMRYGGSSDDENIDEESPSGIYISPMPYGYGAPLCYDDNKRQLINTRYCLVASKQMVGVFLMVWVRSDIREHVKNLKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFVCTHLTSGQKDGDELRRNADVVEILRKTRFPHVHGVGDEKSPETILDHDRIIWLGDLNYRIALSYRSVKALVEMHNWKQLLEKDQAGKKGGFIFLPHTNTPTILTDTQATICVRMRSEEHLHDILQSQNTPDELHFSQDSSNWNIVSQQILKEMLSNCKIRYVLQDCLYITTICVISTDKLND</aaseq>

Gene Sequence

<dnaseqindica>1..30#141..228#532..597#733..820#915..1019#1142..1636#1801..1936#2163..2356#2467..2575#2731..2842#3306..3385#3549..3653#ATGAGAGATGAGAATTCAATCAAGACCAAGGTAAGGGTGCCACAGAGCAAGAGCTAGTCTGTTCATAATATCTATATTTATATTGTTTTTGTCCTGATTGTTTCTGATCTTGTTTTTGTTCTGAACTGGCCTGGAAGAAGCTATCCTGGTCCAAGACCTTTGTTAGGAAGTGGTTCAACATCAAAACAAAAGCCAAGGACTTCCATTCAGATTATGCAGTTGAAGAAGGTACAACTTATTGACTTAATACCACCACTCTCACTTCTGAATTAATGAGCTTGAGTTACCAGGTGTTTGTTTTTCTCCTTATATTCTTTGGTATCCTTTTCACAGTCGTAAATTGTTGTATTTTGGTGTTCAGTACTAACAGTGTGTCGAATTCCAGAAGCAAGTCTGAGCACTTGCTTCCAGTTCTCTTGTATAGTGAGATATTATTTATTGTTTCAGAAACAGCCATAGCATGCTTGAGACCTACAGAAAGAATTTTGTTTTGGCGTGGTGGTGCTAAAAACCTCTTTCTGATCATTTCAGTAGGTGTCCAGTGGAGAACCAGTTTCTCAGAGAGAGATGTATGCAAATCCAAGAAAAGCAGAACAGGTACATTTTGCTTGCCTCATCACAGTAAATATTGTATTCTCACATCTCTTACCTTTGTATTTGAGTAAAAACTGAACTGGAACCTCCAGTCAACATTGTCCTATGCTTGACTGTATTAGTGATGTGTTTACTCAGAGAGGTTGCCTAGGAAGAGTGTGGATCGAGATTCCCGGGTAGGAAATGGATTTGACCGTGCTTATATCACAAATACACAAGACTACAGGTAAATAGATTGTGCCTTTTTAGAACTTAATCGATCCAGTAGTCGTTGTTAGGGAATTTCTCTGATTTGACATTCCGTATGCTCGTATGCACAGGGTCTTTGTTGCAACATGGAATGTGGGTGGAAGGTCACCATCGAGTCATTTGAATTTGGAAGACTGGCTTCATACTTCTCCGGCTGCTGATATATATGTCATTGGGTACAATCCAGATTCATGCAGTGACTTAAATCATATTGTGTTTTCTTTACAAAATATTGTTCATCTAAAAAAGATCTAGCATGCATAAAAAGAAAACTATTAACACTTTTTTATCGTACCAGGTTACAGGAAATTGTTCCTTTGAATGCTGGCAATGTCCTATTGACCGAAGACAATGGTCCAGCAAAGAAATGGGTCGCACTTGTTAGAAAAACGCTAAACAATATAGACCAAGGCTCTGTTGTGTACAACTACCACACCCCTTCGCCGGTTCCAGATCCTATTGTTGAGCTCAATGTTGATTTTGAACGATCATCAAGAAGACCAAGGAATTCATCTTTCTTCCATCGACGTTCATTCCAGTCCTTCAACCGAAGCTCAAGAATTGACATGATGGATCCCCACTCATTAGTGGATCGTCGTTTCAGTGTTTGTGACCGGATTAGCTTTGGGAGTAGGCCAAGTGATGTTGACACCAGTATGAGATATGGTGGGTCATCTGATGATGAGAATATTGACGAGGAATCACCTAGTGGTATATACATCTCACCAATGCCATACGGTTATGGTGCTCCACTATGCTATGATGATAACAAAAGACAGTTGATAAACACTAGGTAGGTTTCCATGAGACTCTGAAGATACAGTCGTTCTGAAACTTGCTAGCTGTTGTAGCTGGCACTTCTATACTATTAACATTTCACTGAAATTCCTTCCATCCTTCATCACTGGAATGATACAAATATTTGCCCTGAAAATAGAGTTTTCTGTAATATAGCAGATATTGCCTAGTTGCCAGCAAGCAAATGGTTGGTGTTTTTCTCATGGTTTGGGTACGAAGTGATATAAGGGAACATGTGAAGAACTTGAAGGTTTCATGTGTTGGCAGAGGTTTGATGGGATATCTCGGAAATAAGGTATCGTTTTCCGCTTTTCCATTTCTCGTAATTGTGTGCTACTTAAATCTTATACTCATCAATCTTTGCAGATACGTTAGTCTTTTCTGTCAAGAAGTGTAGATGATTTATCATTTATGCTTATTGAATTTCACCTGACATCCTGTTTGCATGTGCATCCATATGTTTGTTTACATATGATTATGTAGCTCCATTTGTCCTCACTTTCTTCTCTTATATTAATTAGGGATCGATATCAATCAGCATGTCTCTGCATCAGACAAGCTTCTGCTTTGTTTGCACTCACTTGACCTCAGGGCAAAAGGACGGTGATGAACTTAGAAGAAATGCAGATGTTGTAGAAATTTTGAGGAAGACCAGATTCCCACATGTCCATGGTGTAGGTGACGAGAAGTCACCGGAGACAATTCTTGACCATGAGTAAGTCTCATGTTGCAATAGTTTCAGCTTGGATAAACACGTTGAATAGAACAAAATTTGAAATTATTGGATATAACAATCTTAGCCTATCATTTATTTTGTTTTTTCAGTCGTATAATATGGCTTGGGGATCTTAATTACCGAATAGCTCTTTCATACCGTTCGGTGAAGGCTCTAGTTGAGATGCACAATTGGAAACAGTTACTAGAGAAGGACCAGGTTAGCTATTCTTACAAAAACTGCTAACAGTGTCATGCCTCTTACAATAAACTAGTGTAGCTACGAAAAATGTGGTCTCCTTTTCTTTTTCTTCTCATGTAGAACATTTTTGTAACAGCTTCGAATAGAGCAAAGGTATGGTCGGGTATTTTCAGGCTGGAAAGAAGGGAGGATTTATTTTCCTCCCACATACAAATACTCCTACAATTCTGACAGATACGCAGGCGACGATATGCGTCCGAATGAGAAGCGAAGAACACCTGCATGGTAAGTTAAAATATTATTACAGCAAACCATTCACCCTTCTTCAGAGTTTACACCTTCACCTTTTTGGCTTGTGCTTATTGTAATGGTTTTTCTGAAGGTGCGACCGGATTCTATGGTATGGGAGAGGCCTGAATCAACTATGTTATGTTCGCGGCGAGTCTAGATTCTCAGATCACAGGCCTGTATACAGCATTTTCACTGCGGAGGTTCAGATACCGAGCCAAACCCAATTTTGCAGCTTTGCTCGTTCTACCTCTCTAATGGGGGTGGATGAACTACCATACCCAACTTATCCACGCAGTTACACAGATATCAATTTTTATTGATTGTGTATCTCGATGGAGCCAAGGTTAGTGTTCTTTATCCCATGTAGTCGCATTGTTTGGGCTTGTTGGTCTGACCACTTCTCTGAATTCCATGCCAAAGTGCTCTATTCATCATAACTTCCATCTGTTCATTGCAGACATTCTTCAGTCCCAGAATACACCAGATGAACTTCATTTCTCCCAAGATTCCAGCAATTGGAATATTGTCAGCCAACAGGTGATTCCTGAACTATTGTTTCTTTTGCCCCCTTCAGTGTTTGTGCCTCATCATGTATCCTAGTACATCCACAATGTATGATGAACATGATATGTTTTTTAATTATCTTTTGGCAAATTTACTGCGACTGATACGTCAATTCCGACCTTTTGTGTGCATGCAGATACTCAAGGAGATGCTTTCTAATTGTAAAATTAGGTATGTTCTACAAGACTGCTTGTACATCACTACCATATGTGTGATTAGTACAGATAAATTGAATGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013259

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013259&oldid=58082"