BGIOSGA013428

From RiceWiki
Revision as of 10:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013428| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013428, complete gene.| tag = OsI_132...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013428

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013428, complete gene.

LocusTag

OsI_13234

Ensembl Transcript ID

BGIOSGA013428-TA

Ensembl Protein ID

BGIOSGA013428-PA

Length

2485

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32777465..32779949

Sequence Coding Region

32777465..32777522,32777625..32777895,32778012..32778226,32779127..32779281,32779368..32779949

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32777465..32779949 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32777465..32779949 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGAGATAAGCAATCTGCTTTAATCGTCGCAGCGTTCGTACTCCTCTGTTCAGGGTGTTTGTGCGGAGTTGCAGATGGGGCGAAGGGAGGGAGGAAGACGAAAGGGCCGGTGATCGGCATCGACCTCGGGACGACCTACTCGTGCGTGGGGGTGTACCGGAACGGCCACGTGGACATCGTCGCCAACGACCAGGGCAACCGGATCACGCCGTCGTGGGTGGCGTTCACCGACGACGAGCGCCTCGTCGGCGAGGCCGCCAAGAACCAGGCGGCGCTCAACCCGGACCGCACCATCTTCGACATCAAGCGCCTCATCGGCCGTAGGTTCGACGACGAGGAGGTGCAGCGAGACGTGAAGTATCTCCCGTACAAGGTGGTGGACAAGGGCGGGAAGCCGTACGTCGAGGTGCGGGTCAAGGCCGGCGAGGTGAAGGTGTTCAGCCCCGAGGAGATCAGCGCCATGATCCTCGCCAAGATGAAGGAGACAGCCGAGTCCTACCTCGGCCAGCGCGTCACCGACGCCGTCGTCACCGTGCCTGACATCTTGCTGCTCGACGTGACGCCATTGACGCTCGGGATCGAGACCGCCGGCGGCGTGATGACCAAGCTGATCCCCCGGAACACGAGGATCCCGGTGAAGAAGTCGCAGGTCTTCACGACCTACGAGGATCACCAGACCACGGTCTCGATCAAGGTTTTCGAGGGCGAGCGGAGCTTGACGAAGGACTGCCGCGAGCTGGGGCGGTTCGACCTGTCCGGGATTGCGCCGGCGCCGCGCGGCGTGCCGCAGATCGAGGTGACGTTCGAGGTCGACGAGAACGGCATCCTGCACGTGACGGCGTCGGACAAGGCGGCGGGGCGGTCCAAGTCGATCACCATCACCAACGACAAGGGCCGGCTCAGCCAGGAGGAGATCGACCGGATGGTGCGCGAGGCCGAGGAGTTCGCGGAGGAGGACCGCCGCGTCCGGGAGCGCGTCGACGCGCGCAACCGCCTCGAGAACTACGTGTACCGCATGCGGAGCGCCGTGCGGGACGGCGGCATGGCCGGCAAGATCGGCGACGACGACAGGGAGAGGATGGAGTCCGCCCTGACGGAGGCTCTGGAGTGGCTGGAGGACAACGACGGCGGCGCACGGACGGCGGAGAAGGAGGACTACGAGGAGAAGCTGAAGGAGGTGGAGCAGGTGTGCGGCCCGATCATCAAGCAGGTCTACAAGAAGAGCGGCGACGCGTCGGCCGGCGCCGGAGACGACGACGACGTGAATGAGCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MARDKQSALIVAAFVLLCSGCLCGVADGAKGGRKTKGPVIGIDLGTTYSCVGVYRNGHVDIVANDQGNRITPSWVAFTDDERLVGEAAKNQAALNPDRTIFDIKRLIGRRFDDEEVQRDVKYLPYKVVDKGGKPYVEVRVKAGEVKVFSPEEISAMILAKMKETAESYLGQRVTDAVVTVPDILLLDVTPLTLGIETAGGVMTKLIPRNTRIPVKKSQVFTTYEDHQTTVSIKVFEGERSLTKDCRELGRFDLSGIAPAPRGVPQIEVTFEVDENGILHVTASDKAAGRSKSITITNDKGRLSQEEIDRMVREAEEFAEEDRRVRERVDARNRLENYVYRMRSAVRDGGMAGKIGDDDRERMESALTEALEWLEDNDGGARTAEKEDYEEKLKEVEQVCGPIIKQVYKKSGDASAGAGDDDDVNEL</aaseq>

Gene Sequence

<dnaseqindica>1..58#161..431#548..762#1663..1817#1904..2485#ATGGCGAGAGATAAGCAATCTGCTTTAATCGTCGCAGCGTTCGTACTCCTCTGTTCAGGTAAGCACCATGGAATGATGCTTGGTTTGATTTGTTTTCAAAATTTGCAATGTGCTCAAATTTGATCGGTTTTTTACTTCTTTTTTTTTTTGGTTCCTGTAGGGTGTTTGTGCGGAGTTGCAGATGGGGCGAAGGGAGGGAGGAAGACGAAAGGGCCGGTGATCGGCATCGACCTCGGGACGACCTACTCGTGCGTGGGGGTGTACCGGAACGGCCACGTGGACATCGTCGCCAACGACCAGGGCAACCGGATCACGCCGTCGTGGGTGGCGTTCACCGACGACGAGCGCCTCGTCGGCGAGGCCGCCAAGAACCAGGCGGCGCTCAACCCGGACCGCACCATCTTCGACATCAAGCGCCTCATCGGCCGTAGGTAAATGTTCCTCACTAGCTTTTCTTCTTCTTCCTGAGCTCTCTCGATGCAAATGGAGAAGCTAGCCGTGGTTGATTGATTGATTTGGGTGGATTTTTCCGGCCTGTCGCCGGCAGGTTCGACGACGAGGAGGTGCAGCGAGACGTGAAGTATCTCCCGTACAAGGTGGTGGACAAGGGCGGGAAGCCGTACGTCGAGGTGCGGGTCAAGGCCGGCGAGGTGAAGGTGTTCAGCCCCGAGGAGATCAGCGCCATGATCCTCGCCAAGATGAAGGAGACAGCCGAGTCCTACCTCGGCCAGCGCGTCACCGACGCCGTCGTCACCGTGCCTGGTTTGTAATGCGAAAGCTTCTGGCCGCCGCTCCAGAGGTTGACGACGACGACGACTTATGCTAAGTGTGCTCTGCTTGATTTGCAGCGTACTTCAACGACGCGCAGAGGCAGGCGACCAAGGACGCCGGCACGATCGCCGGGCTGAACGTGCCGCGGATCATCAACGAGCCGACGGCGGCGGCGATCGCGTACGGGCTCGACAGGAAGGGGGCGGGGGAGATGACGAACGTGCTGGTGTACGACCTCGGCGGCGGGACGTTCGACGTGAGCGTGCTGAGCCTCGACCACGGCGTGTTCGAGGTGCTCGCCACCAGCGGCGACACGCACCTCGGCGGCGAGGACTTCGACCGCCGCGTCATGGACCACTTCATCCGCCTCGTCAAGCGGCAGCACGGCAGGGACATCGGCGGCGACGGCCGCGCGCTCGGCAAGCTCCGCCGCGAGTGCGAGCGCGCCAAGCGCGCGCTCAGCAGACAGCACCAGGTCCGCGTCGAGATCGAGGCGCTGTTCGTCGGCGTCGACTTCTCGGAGACGCTGACGAGGGCCAAGTTCGAGGAGCTCAACATGGACCTGTTCAAGAAGACGCTGGGACCTGTCCGGAAGGCCATCGCCGACGCCAAGCTCAAGAAGTCCGACATCGACGAGATCGTCCTCGTCGGCGGCAGCACCAGGATCCCCAAGGTGCAGGAGCTCCTCAAGGAGATGTTCGACGGCAAGGAGCCAACCAAGGGGATCAACCCCGACGAGGCTGTCGCCTATGGCGCCGCCGTCCAGGGCAGCATCATCAGCGGCGAGGGCGGCGCCGAGACCAAAGGTAACGCAAATGCGTTTGAATTACCAGCGTGTTCGGCTGGTCACGCCATGAGTCCTCCTCACACATTGCTGTTCTTGGTGACCAGACATCTTGCTGCTCGACGTGACGCCATTGACGCTCGGGATCGAGACCGCCGGCGGCGTGATGACCAAGCTGATCCCCCGGAACACGAGGATCCCGGTGAAGAAGTCGCAGGTCTTCACGACCTACGAGGATCACCAGACCACGGTCTCGATCAAGGTAAGCACATTTCAGCTCGTGCATTGACCTGATAACATTGATTCTTCAGTTCTTGAGACTGACGAAGCTCTGAATTTCTTTTTCAGGTTTTCGAGGGCGAGCGGAGCTTGACGAAGGACTGCCGCGAGCTGGGGCGGTTCGACCTGTCCGGGATTGCGCCGGCGCCGCGCGGCGTGCCGCAGATCGAGGTGACGTTCGAGGTCGACGAGAACGGCATCCTGCACGTGACGGCGTCGGACAAGGCGGCGGGGCGGTCCAAGTCGATCACCATCACCAACGACAAGGGCCGGCTCAGCCAGGAGGAGATCGACCGGATGGTGCGCGAGGCCGAGGAGTTCGCGGAGGAGGACCGCCGCGTCCGGGAGCGCGTCGACGCGCGCAACCGCCTCGAGAACTACGTGTACCGCATGCGGAGCGCCGTGCGGGACGGCGGCATGGCCGGCAAGATCGGCGACGACGACAGGGAGAGGATGGAGTCCGCCCTGACGGAGGCTCTGGAGTGGCTGGAGGACAACGACGGCGGCGCACGGACGGCGGAGAAGGAGGACTACGAGGAGAAGCTGAAGGAGGTGGAGCAGGTGTGCGGCCCGATCATCAAGCAGGTCTACAAGAAGAGCGGCGACGCGTCGGCCGGCGCCGGAGACGACGACGACGTGAATGAGCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013428