BGIOSGA013759

From RiceWiki
Revision as of 10:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013759| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013759, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013759

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013759, complete gene.

LocusTag

OSJNBB0015I02.6

Ensembl Transcript ID

BGIOSGA013759-TA

Ensembl Protein ID

BGIOSGA013759-PA

Length

4984

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37926103..37931086

Sequence Coding Region

37926103..37926177,37927101..37927198,37927640..37928675,37928772..37929284,37930184..37930372
,37930443..37930576,37930924..37931086

Genome Context

<gbrowseImage1> name=IndicaChromosome03:37926103..37931086 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:37926103..37931086 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGATCTTCAAGACCGACAACTTCGACCCCGACGCGTACGTGCAGTCCAAGTGCCACGCCATGAACGAGAAGGAAATAAGACACCTCTGTTCTTATCTGCAAGACCTAAAGAAGGCTTCTTCTGAAGAGATGCGTAGAAGTGTTTATGCGAATTATGCTGCATTCATAAGAACATCAAAGGAGATATCAGACCTTGAAAGGGAGCTGCTATCTGTCAGAAATCTGCTAAGTACACAGTCAGCTCTAATTCGTGGTCTATCTGAAGGGGTTCATATTGATTCCTTGACTACAGGGTCTGAAGGCTCTGCAGAAGAGGGGACAGATGAAGACCAGGAGCCCTCAGAAATACAAAACTGGTGCACAGATTTCCCTGAGATGCTTGATGTTTTGCTAGCTGAGAGAAGAGTGGATGAAGCATTGGATGCTTTGGATGAAGCAGAACGTGTCGTTGCTGATGAAAAACAGAAACAGACACTCACCACAGCTGACATTCTGGCCGTGAAGAGGGCTATCTCTGATAATCGTCTGAAATTGGCAAATCAGCTAGCAGAAGCTGCTTGCCAGTCTTCTACTCGTGGCGTTGAACTTCGTGCTTCAGCTTCTGCTCTCAAGAGACTCGGTGATGGACCCCGTGCTCATAGTTTGTTGCTTAGTGCACACAACCAGAGGCTTCAATGCAGCATGCAAACTATACATCCGTCTAGCACATCACACAGTGGGGCATACACTGCATCTCTTGCACGGCAAGTTTTTTCTGTTATAGCCCAGGCTCTCAGTGACTCTTTAGAACTGTTTGGTGATGAACCGTCTTATTTGTCTGAACTGATTACATGGGCTACAGAACAAGCAATGTTATTTGCACTACTTGTAAAGAGGCATGCTTTAGCCGCTTGTGTGGCTGCTGGGGGCTTGAGAGCTGCTGCCGAATGTATTCAGATCTCACTTGGTCATTCTTCCTTGCTGGAAACTCGTGGTTTGTCACTTTCGTCTGTTCTGATGAAGCAATTCAAACCCTCTGTTGAGCAAGCACTGGAGTCCAGTTTGAGGAGAATTGAAGAGAGTACTGCTGCTTTAGCTGCAGCTGATGACTGGGTACTCACCTATCCTCCATCTGGTATACGGACGTTTGCTAGATCATCTGCTAGTAGTTTGTTGCTCCAACCTAAGCTCTCAAACAGTGGCCATCGCTTCAGTTCAATGGTTCAGGATTTCTTTGAGGATGTTGGCCCACTGCATAGCTTGCAGTTAGGTGGTTCTGCAATGGATGGGCTTCTGAAAATATTCAATTCATATGTCAATCTGCTCATAAGTGCTCTGCCACACTCACTGGATGATGAAACGATTTTGGAAGGTTTAGGAAATAAGATTGTTCGAGTGGCAGAGACTGAGGAGCAGCAGCTAGCATTGTTCGCTAATGCATCCTTACTAGCTGAAGAGTTGCTACCTAGAGCAGCTATGAAGTTGTCGTCTGTAAACCAGACCGGTGTGAATGATATTCGTAAAAAAAGTGTAGACAGGCAAAACCGTGTAGCAGAGCAGCGAGAATGGAAAAAGAAGCTGCAACGTATTGTGGATAAACTTAAAGATAGTTTCTGCAGACAGCACGCCCTTGATCTTATATTCACGGAAGATGATGACACCCGTCTGAGTGCAGAAATGTACATCAATATGGATAATACTGTTGAAGAGCCAGAATGGGTTCCATCTCTAATTTTTCAGGAATTATATGCAAAGTTAAACAGGATGGCGAGCATTGCTGCAGATTTGTTTGTTGGTAGGGAAAGGTTTGCTACATTCCTACTGATGCGGCTTACAGAAACAGTCATACTGTGGCTATCAGAGGACCAGAGCTTTTGGGAAGAGATTGAAGAGGGGCCAAGGGCTCTGGGTCCCCTTGGACTTCAGCAGTTCTACCTGGATATGCAATTTGTCATCCTTTCCGGGCGAGGCCGTTTCTTATCTCGGCACGTACATCAAGTGATACTGAAAATCATTGATAGAGCAATGGCAGCATTTTCTGCTACAGGGATGAACCCTGATAGTGTCCTTCCAAGCGACGATTGGTTCATCGACGTTGCTAATGACACTATCAGTAGGATCAGTGGCAACCCTCGAACTGCCAATGGGGATAGGGAGGTGAACAGCCCGACAGCCTCCGTTTCAGCGCAATCTATATCGTCGGTCAGATCCCATGGCAGCTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MKIFKTDNFDPDAYVQSKCHAMNEKEIRHLCSYLQDLKKASSEEMRRSVYANYAAFIRTSKEISDLERELLSVRNLLSTQSALIRGLSEGVHIDSLTTGSEGSAEEGTDEDQEPSEIQNWCTDFPEMLDVLLAERRVDEALDALDEAERVVADEKQKQTLTTADILAVKRAISDNRLKLANQLAEAACQSSTRGVELRASASALKRLGDGPRAHSLLLSAHNQRLQCSMQTIHPSSTSHSGAYTASLARQVFSVIAQALSDSLELFGDEPSYLSELITWATEQAMLFALLVKRHALAACVAAGGLRAAAECIQISLGHSSLLETRGLSLSSVLMKQFKPSVEQALESSLRRIEESTAALAAADDWVLTYPPSGIRTFARSSASSLLLQPKLSNSGHRFSSMVQDFFEDVGPLHSLQLGGSAMDGLLKIFNSYVNLLISALPHSLDDETILEGLGNKIVRVAETEEQQLALFANASLLAEELLPRAAMKLSSVNQTGVNDIRKKSVDRQNRVAEQREWKKKLQRIVDKLKDSFCRQHALDLIFTEDDDTRLSAEMYINMDNTVEEPEWVPSLIFQELYAKLNRMASIAADLFVGRERFATFLLMRLTETVILWLSEDQSFWEEIEEGPRALGPLGLQQFYLDMQFVILSGRGRFLSRHVHQVILKIIDRAMAAFSATGMNPDSVLPSDDWFIDVANDTISRISGNPRTANGDREVNSPTASVSAQSISSVRSHGSS</aaseq>

Gene Sequence

<dnaseqindica>1..75#999..1096#1538..2573#2670..3182#4082..4270#4341..4474#4822..4984#ATGAAGATCTTCAAGACCGACAACTTCGACCCCGACGCGTACGTGCAGTCCAAGTGCCACGCCATGAACGAGAAGGTAAAGGGATTGGTCCACTCGTGAAACGGGGAGGAAACTGGAGTGGTAGAATTTTGGTCGGAAGTTCACACGCGCTTTTGCTGTTCTGTGTTCGAGAGGTGTGAGGGATACGGTGTCGGGAGTTTCCCAGTGCATTTGAACTAGCGAAAGTGTGAATTGAGCGTTATTAGGATTGTTTCCCTTAGAGGGAAAACGGTGGTTGCATGGAACTAGATATGTTTATTGTGTTTGATTTTTTTCATGTTCAGATACTAGTTATGAAACAGGTTTTTTTTACTCTGATGCGGAGAAATACTGATTCTGGCCAGTACTGACAAATTTCTGGTTGCGCTGCATGCTTGCGTAGTTGAATTGAGGTCGAATTAAGTTTGTCAATAACCTTGAATTTGCATTTGTCTGGAGCTTGGAGGGAGCACTGAAGTAGAGTGCTGTTAGTTTGTTAGTTTTATGTTATCTTCTAGAGAAGTGACCACATGTAGATTTACACATATTTGCAAAGAACCGGAGTTTGTACTATATTATGGCGGCTCTGGTGATGAAATGAATCGTACGCAAATTTTGTAAGGGTTCTTTTTTTGTTTTAGAAAGTTGGCGTTTATTGTATATGAGATAAATGGTTGCCTTTAAATTGCTTTTACCTATTGTTTTGTGCGGGAGACCACTTGTGCTCATGGTTGTCAAAGGATTTGGGTAGCAACGAATGGATGATCCTACACTTCTACCTTTTCTGCATGAGTTATGCTCACTTAAGACCTATTTTGCAGTTGTGCCGTATCATGCATGTGTGCATTTTCTGAGGCTTCAAATGTTGAGTTTCCTTTGCATGCTCCCTGTGTGTGTTTTAGAGCTTGAACTATTACTTTAGTAAAAGGCACATCATGCTTGGAAAATCTAACAGGATTGATGCTCAAAAACTGTGACAGGAAATAAGACACCTCTGTTCTTATCTGCAAGACCTAAAGAAGGCTTCTTCTGAAGAGATGCGTAGAAGTGTTTATGCGAATTATGCTGCATTCATAAGGTGTGAACACAATTGTTGAAATTTTAATCTAACCCAAGGGAGTATATCCCTGGACTCAGAGTATCGTGTCTGATTATTCTCCAATTTTTATTCTTTTTGTTTCTCTAAAATGAGTATGCCTGCTAGCTTTGTTTATTGCTAATCTTTGGCATCTCAACCGCTGCGCACTCCATACAAGTTCATAAAATTTTGAATTAGTATTTTGTAAGAATCACAATCCAAAGAATTATTGAAAAAAGAAAGGTAGGCAGCGGATTTGTCGTTTCTGCAAAATTATATGCAGATGTCATAAAACTTGTGGGATGCAAAATCATAATTGTATTTTTTTTTCACATCTGGTATTTCTCTGTTTTTCTTAGTTACTTCCTGGGATTGTTCTCTGTTTTATCCAGTTCATAACTTTCGGATAAAATGTTGATAACTCAATCTCCTGGTTTTCAGAACATCAAAGGAGATATCAGACCTTGAAAGGGAGCTGCTATCTGTCAGAAATCTGCTAAGTACACAGTCAGCTCTAATTCGTGGTCTATCTGAAGGGGTTCATATTGATTCCTTGACTACAGGGTCTGAAGGCTCTGCAGAAGAGGGGACAGATGAAGACCAGGAGCCCTCAGAAATACAAAACTGGTGCACAGATTTCCCTGAGATGCTTGATGTTTTGCTAGCTGAGAGAAGAGTGGATGAAGCATTGGATGCTTTGGATGAAGCAGAACGTGTCGTTGCTGATGAAAAACAGAAACAGACACTCACCACAGCTGACATTCTGGCCGTGAAGAGGGCTATCTCTGATAATCGTCTGAAATTGGCAAATCAGCTAGCAGAAGCTGCTTGCCAGTCTTCTACTCGTGGCGTTGAACTTCGTGCTTCAGCTTCTGCTCTCAAGAGACTCGGTGATGGACCCCGTGCTCATAGTTTGTTGCTTAGTGCACACAACCAGAGGCTTCAATGCAGCATGCAAACTATACATCCGTCTAGCACATCACACAGTGGGGCATACACTGCATCTCTTGCACGGCAAGTTTTTTCTGTTATAGCCCAGGCTCTCAGTGACTCTTTAGAACTGTTTGGTGATGAACCGTCTTATTTGTCTGAACTGATTACATGGGCTACAGAACAAGCAATGTTATTTGCACTACTTGTAAAGAGGCATGCTTTAGCCGCTTGTGTGGCTGCTGGGGGCTTGAGAGCTGCTGCCGAATGTATTCAGATCTCACTTGGTCATTCTTCCTTGCTGGAAACTCGTGGTTTGTCACTTTCGTCTGTTCTGATGAAGCAATTCAAACCCTCTGTTGAGCAAGCACTGGAGTCCAGTTTGAGGAGAATTGAAGAGAGTACTGCTGCTTTAGCTGCAGCTGATGACTGGGTACTCACCTATCCTCCATCTGGTATACGGACGTTTGCTAGATCATCTGCTAGTAGTTTGTTGCTCCAACCTAAGCTCTCAAACAGTGGCCATCGCTTCAGTTCAATGGTTCAGGTAATGTTCTATTGCTTGACAAATGTTTCTAGCCTTTGTAATTGAGGATTTATACATAAAGTTATTCTTTTAATGTTTTACTGTATTATTTTGCAGGATTTCTTTGAGGATGTTGGCCCACTGCATAGCTTGCAGTTAGGTGGTTCTGCAATGGATGGGCTTCTGAAAATATTCAATTCATATGTCAATCTGCTCATAAGTGCTCTGCCACACTCACTGGATGATGAAACGATTTTGGAAGGTTTAGGAAATAAGATTGTTCGAGTGGCAGAGACTGAGGAGCAGCAGCTAGCATTGTTCGCTAATGCATCCTTACTAGCTGAAGAGTTGCTACCTAGAGCAGCTATGAAGTTGTCGTCTGTAAACCAGACCGGTGTGAATGATATTCGTAAAAAAAGTGTAGACAGGCAAAACCGTGTAGCAGAGCAGCGAGAATGGAAAAAGAAGCTGCAACGTATTGTGGATAAACTTAAAGATAGTTTCTGCAGACAGCACGCCCTTGATCTTATATTCACGGAAGATGATGACACCCGTCTGAGTGCAGAAATGTACATCAATATGGATAATACTGTTGAAGAGCCAGAATGGGTTCCATCTCTAATTTTTCAGGTCCGTATAAATTTTTTGCCCTTAACAACTATCTGGATAAACATTACTGCTTATATTTGTTTGAAGAATGAGGTTCATTATGACATTCATCATTGAGGTAGTTCTTCTATGATCTATAAAATATATTGATTTTTAGATGAATTGTTGTAAAATAAGTAAACCAAACTGTTTTTTCTGAATCTATGCTCTATAGCACTTCCTTTCTTGTTTATATACATAGAAGACATGAAAAACCGAGGAATGATGCAAGGGTTAGATACATAGAAGGATAAAGTAAATATAGCATGTTTCATGCATGCCCACTTGACATGTACACATTACGTCTTAATCAGCATAAACTTGGTAAAATTGGCCTTGTCGTGTCCTTTTGGCCTTGGTTCGCACACACTAGACAAGTCTTTGCACTAAAACGAGTGTTTGCCAAGTTCATCCACTAGATTGCACCCACCAAACAAGTTCATGTACGCAATGCAATTCACTCATATGGTAAAGAAGTTGCATTCAGCTGCAAATAATTTCCTAGTTATTGCTTGTGCTATTATACTGGTATGTCTAGCCCAACATTAACAAGATCAACCAAATTGTAGAACCAACAGTACAGAACTCTGTTTGGTTCCTGATGAGTTGTCACCAAAAATAGATTTTGGCAGCTGGCTGGCTTGCAATTTTGTTCGAAGAAATGCTTTATTTAGAAATTGAAACCAGAAAATTTTGCACTTTGAGAAATATAACAAAGGTACAATTTTGAATTAGATAATAGACTTCAGTATTTTGTCAGGCAGAAATTTTGTTAATGTAAAGCTTAGATGACAACCCATGAAACTTGGGCAGTCATGCTGCTTGCAAATCTACCCAAGAAACTTCAGCCTTTTGTTGCAGCATCTCATATATTGTTGCAGGAATTATATGCAAAGTTAAACAGGATGGCGAGCATTGCTGCAGATTTGTTTGTTGGTAGGGAAAGGTTTGCTACATTCCTACTGATGCGGCTTACAGAAACAGTCATACTGTGGCTATCAGAGGACCAGAGCTTTTGGGAAGAGATTGAAGAGGGGCCAAGGGCTCTGGGTCCCCTTGGACTTCAGCAGGTGAGCTCTTTTTTTCTTGTTTTGATCTTATGACACCAACTATTATTCTTATTTTCACCTTCCTTTTCAGTTCTACCTGGATATGCAATTTGTCATCCTTTCCGGGCGAGGCCGTTTCTTATCTCGGCACGTACATCAAGTGATACTGAAAATCATTGATAGAGCAATGGCAGCATTTTCTGCTACAGGGATGAACCCTGATAGGTATGTTACTATCTATCTGACTTGCATCTATCCTTTTGCGGTTAATAAATCTATTTCAGTCCGACTGTATTTAGTAGGAGGTGCTAATATTAATATCTATGCATGTTATGCTGTAATGGCAATCGGATGCATGCATGTATTTTGCTCCATGTTACAATTGTAATAGATTCCTCACATACCAGAAACTGGCTGGAATAGGCTAGTGATTATGCAATTCCTGGTTTATTCATTTTTTAGATAATAATTCCTGGTTTATTCATAGCTGGAATAGGCTAGTGATTATGCAATTCCTGGTTTATTCATAAAGGTTGGTAACTGAAGATGATATACCCGTTTATTCTCTGCAGTGTCCTTCCAAGCGACGATTGGTTCATCGACGTTGCTAATGACACTATCAGTAGGATCAGTGGCAACCCTCGAACTGCCAATGGGGATAGGGAGGTGAACAGCCCGACAGCCTCCGTTTCAGCGCAATCTATATCGTCGGTCAGATCCCATGGCAGCTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013759