BGIOSGA013877

From RiceWiki
Revision as of 10:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013877| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013877, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013877

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013877, complete gene.

LocusTag

OSJNBA0078D06.31

Ensembl Transcript ID

BGIOSGA013877-TA

Ensembl Protein ID

BGIOSGA013877-PA

Length

6806

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39328028..39334833

Sequence Coding Region

39328028..39328258,39328668..39328854,39329226..39329298,39329415..39329559,39329940..39330049
,39330397..39330528,39330598..39330739,39330815..39330949,39332498..39332655
,39333547..39333621,39333725..39333863,39334058..39334327,39334687..39334833

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39328028..39334833 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39328028..39334833 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTCTGCCGCCGCCTCCGCCGATGGGGGCGCGTTCCTCGAGTTCGTCGACTACGCCATCTCCATGCTCTCCTCCTCCTCCTCCGGGGGAAACGGCGACGAGTCCCCCGGCGCCGGGCCAGCGCCTGCGCGGCCGCCGTGGGGGTGGGCGGTGGCGCAAGTGCTCAAGTCGTGCTGCGCTTATTCCAGCGGCGTCACCGCCGCCATCCTGCTCTCCGACCTCTTCCAGTCTTGGACAGAACAAAGCAAGTCTCTGACCGCAAAGAGGAAAGTTGAATTGACCAATCTTCTAAAAACAAGAAATAGAAGAAGGCGGCTTCCTAATACCATCACAATCGATTCTATCCATGAGAAGAACTTCCTATCTCCTAAGAGTGTCCTTGAAGCTGTTGTCATTGATGTGTTTGTCATTCCTGGTACAAACATATACATGCTTACCTTGGGAGACATGTGGAGCACATCGACTATCGATCTATATCTACACCGAAGGTACTACAACTACATTGGACAGCATGATGTCTTGAAGAAGGGTCGAGAAGTTATGCTCACGGGATGTTGCCTACGTACAGCTATGGAGGGATCAGGCCATGCTCGTATTTTGCCAACAGAATATATGGTGATGTTACTTGATGAGGAGGAAGATGAAGATGCCATGTTACTTGCCGCACAGTTTTGCATGTATTCTTTCTCATCTATGATGCTAGATGAGAACAGAAACAATATTTCCTATTCGTTTTATGCCAGGATCGAAAAGATCGAGTCTTTAGAACCATTTGGATCTACAGAAAGAAAGCAGATTGTACTTGTTGACAATGATGATGCAAAAATAAAATTTGTTTTATGGGGGGAGCAGGTTTTGCTTGCAAATCTTTTCAGCGTAGGGAGCATGCTTGCACTGCACAGACCTTTTATTGCAAATTATGTGCACAATAATCATGAGGAGTCTCAGGAACTTTGCCTTGAATATGGCAGTGCTACACAGGTTTATTTGGTGCCTATTGCTCAGCAGGAGGAACAGGTACTTCTTACACCTACTCAAATAAGGAGTCAAGGGTCTCGATTGTCATGTGTTCCAAGTGATCATATGGCTTCACAAGTAACATTACCACGTGATTTGCATGGTTCAGTTGATTTCAGCAAATATCCATTTCGAGTATACGTAAGTGATCTTCATGATAAAATGGTTGGAGTTAGTCTGTTTGGCATGGTAACAAGTGTTTGCAAAGCAAGTACATCAGGCACTTACTTTTATTTGGAGATAGAAGATGCAACAGGAGTTGTCCTGATGAAGCTTAACTTCATTGGACTCTGGTCGCTAGGCAGGGTAGGTGTTGGTCATATGGTGTACATGTCTGGTTTGACTTGTACCTTGAGTTCAACAAACAAGCTTGAAGTCGCGTGGACTGAAAAGGAACCAGGGTCTCTATTTGTTAACATAAGCTTGCTGCCAGCGCTTCTTAATTCAACATGCCTGCATAATTTGTCACTCTTGTCAGATCTTCCCCATTCAACTAATAGAACACATATATGCCATGTTCGACTTGACCACATCGATGTCAACAGTTTGAAGGTATTATTATTCCACAATCTTTGTGGGTGTGTTGTGAGTGATCAATCAGGCGGACTTCAGTGTTCCTTCTGTAAGTGCGCATGCCATATCAGTGGATGTACACATGGCTTTCAGCTTCACTTGACCATTGCAGATGACAGTGAAAAGGTTTTTGCCTGGTGCATTGGGCAAACAGCCGTAGAGTTCCTTCAAATATCTCCTGATGAATATATGGAACTCCCTGAGGATGAACGAGCAATGTATCTCTATACTCTTCAGAATGAGAATTTTACGGTCGCTATTGCAAATACCAGCCAGCGGATTGAAGCGTATATTGAAGGCGAGAAATTTCTTCCAGTATGGGAGATCACAAGAGCCCAAAAATGCGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MDSAAASADGGAFLEFVDYAISMLSSSSSGGNGDESPGAGPAPARPPWGWAVAQVLKSCCAYSSGVTAAILLSDLFQSWTEQSKSLTAKRKVELTNLLKTRNRRRRLPNTITIDSIHEKNFLSPKSVLEAVVIDVFVIPGTNIYMLTLGDMWSTSTIDLYLHRRYYNYIGQHDVLKKGREVMLTGCCLRTAMEGSGHARILPTEYMVMLLDEEEDEDAMLLAAQFCMYSFSSMMLDENRNNISYSFYARIEKIESLEPFGSTERKQIVLVDNDDAKIKFVLWGEQVLLANLFSVGSMLALHRPFIANYVHNNHEESQELCLEYGSATQVYLVPIAQQEEQVLLTPTQIRSQGSRLSCVPSDHMASQVTLPRDLHGSVDFSKYPFRVYVSDLHDKMVGVSLFGMVTSVCKASTSGTYFYLEIEDATGVVLMKLNFIGLWSLGRVGVGHMVYMSGLTCTLSSTNKLEVAWTEKEPGSLFVNISLLPALLNSTCLHNLSLLSDLPHSTNRTHICHVRLDHIDVNSLKVLLFHNLCGCVVSDQSGGLQCSFCKCACHISGCTHGFQLHLTIADDSEKVFAWCIGQTAVEFLQISPDEYMELPEDERAMYLYTLQNENFTVAIANTSQRIEAYIEGEKFLPVWEITRAQKCE</aaseq>

Gene Sequence

<dnaseqindica>1..231#641..827#1199..1271#1388..1532#1913..2022#2370..2501#2571..2712#2788..2922#4471..4628#5520..5594#5698..5836#6031..6300#6660..6806#ATGGATTCTGCCGCCGCCTCCGCCGATGGGGGCGCGTTCCTCGAGTTCGTCGACTACGCCATCTCCATGCTCTCCTCCTCCTCCTCCGGGGGAAACGGCGACGAGTCCCCCGGCGCCGGGCCAGCGCCTGCGCGGCCGCCGTGGGGGTGGGCGGTGGCGCAAGTGCTCAAGTCGTGCTGCGCTTATTCCAGCGGCGTCACCGCCGCCATCCTGCTCTCCGACCTCTTCCAGGTTAGACATTTTTACTTGAATTCAAACTACATCTCGAGGATGCAACTCTTTCTCCAAGCTGTTACAGTTTCTATTTGTGCCTTGTGCTCGTTGTTAGAATCAAATTTGTTCTGAATGCGATTCCGGATATATCGAAGAATGTCGAACCAATGTGATCTCTATATCGAAACAGAAAAGGGCATACATAAGCAATTATTCACTAATCACCCCCCATAGATTCTGGCACCGCTCAAGCAAGTGGCTTATATTATTTTTCCAAGGATAACACAATTTGGCAATCCATGCTTCTTGCTTGTGTACAGACTAACAAATGCAAACCCATTTCAAATCCATGATTGCATTTTTTTTCACCATTTCTTTTCGCATTGGACATGTGGATTAGCCTTTAAATATTTTCTGCTTTTGCTAGTCTTGGACAGAACAAAGCAAGTCTCTGACCGCAAAGAGGAAAGTTGAATTGACCAATCTTCTAAAAACAAGAAATAGAAGAAGGCGGCTTCCTAATACCATCACAATCGATTCTATCCATGAGAAGAACTTCCTATCTCCTAAGAGTGTCCTTGAAGCTGTTGTCATTGATGTGTTTGTCATTCCTGGTATGCTTATACTTTGCTTCTATCAAACAAAGAAACTATATCTGTTAGCTATTTTTATATTTTTTAGCCTGGGCCAGCCAAATTTCATTAAGATTATGAGTGGTGTTACAAGCTATTTTTATATTGTATCAGAATATTTGTCCTCTGCAGGGATGTTTAGTAGTAAACAGAATGCCTATTAGTTCTCTATGTCATTTTTCCTCAACAAGGGCACAAGTTAAATCTTATGAATATCCTTGATCATTGGATTATCATTTTTTCCAACATGATCCTTGAATAAATGTACTGATAAAATTAATCGCTTGAACTTGCACTTTATATATGGCTGCTAACTTGCATTTTCTTCGATTACCTCCTAAACTGTCTTGTAGGTACAAACATATACATGCTTACCTTGGGAGACATGTGGAGCACATCGACTATCGATCTATATCTACACCGAAGGTAGATCTGAGTATGACTATTTATTGCTTAGATAATGCTACTTAATAATGCATTAGAAATCCATCAGTGAATGAAGGTAAAATTGTTACTGGACTGACTCTAAATTTTCATGTTAGGTACTACAACTACATTGGACAGCATGATGTCTTGAAGAAGGGTCGAGAAGTTATGCTCACGGGATGTTGCCTACGTACAGCTATGGAGGGATCAGGCCATGCTCGTATTTTGCCAACAGAATATATGGTGATGTTACTTGATGAGGTACCTAAGAAACACATTTAGGTTTATAAGGAAGTGGAGTTCACAACATGTTTTTTGTTTTCAGCTTGTCATTTCTTGGGTCAATTTTCTTTTTTCTTTTAATTCACTTTCATCCCTCATGGTTCTTCATCGTTCACAGTGATAATAGATTACAAAAATATCTTCTAAACACTAAACAATTTCATTGTTCTTTACTCAGCCCTCAGTAAACTAGCTGCTAACTTCTTGCTTCTTATAAGGATTCAATACTAGTATTAAGCTGCTAGTAGAAGTTAAAATTTTGCATTTGTGCTGTGGAGTGCTAGATGCAACTGGTTCAATTTTTTTTCTCGTACTATATCACACACTATTTAGTTTCGACTCATGTTTAATTTATACAGGAGGAAGATGAAGATGCCATGTTACTTGCCGCACAGTTTTGCATGTATTCTTTCTCATCTATGATGCTAGATGAGAACAGAAACAATATTTCCTATTCGTTTTATGCCAGGTATATTAGATATATTGTACTTTTTAGTTTTTAATGGTGACATTTTTTACATTCGCCCTGTTCGGCAGCTATCGCTGCTGCAGCTGCTGCTGTACATAGTCTCTTCAAGCCGCAGCAATTTTGAACTTCTGCCGCCGCAGCTGCTGCTGCAAAAATGCCCTCTGAACACACCCTATGTGTACTGCTGTGGCTATATTAGCACAACACATTCAGTTACCAACACTATGATTTCTGGTAAAAAGAAGAAGAAGAGCTTATCTATCCAGTTGAGAATATAAGTTGAATAGAATGAACCAAATCACTTGACCTTGAACGATTTGTAACACTGCTATTTCTTTGCCCTGTAGGATCGAAAAGATCGAGTCTTTAGAACCATTTGGATCTACAGAAAGAAAGCAGATTGTACTTGTTGACAATGATGATGCAAAAATAAAATTTGTTTTATGGGGGGAGCAGGTTTTGCTTGCAAATCTTTTCAGGTTTATTCCACTCAATATAAGTACCAAATGTCTCATTCAAGTTATTGTAAACTAAACTTTCTATTTTAGCGTAGGGAGCATGCTTGCACTGCACAGACCTTTTATTGCAAATTATGTGCACAATAATCATGAGGAGTCTCAGGAACTTTGCCTTGAATATGGCAGTGCTACACAGGTTTATTTGGTGCCTATTGCTCAGCAGGAGGAACAGGTTGGTATGAATATCTTGGTGCTACATCTTTTTGCACTACTCCTTTTGACCAAGATGGAAATGATTGTGTGCTAGGTACTTCTTACACCTACTCAAATAAGGAGTCAAGGGTCTCGATTGTCATGTGTTCCAAGTGATCATATGGCTTCACAAGTAACATTACCACGTGATTTGCATGGTTCAGTTGATTTCAGCAAATATCCATTTCGAGTAAGTAACCTGAACTTCATTTTTCTGAGTTTATTTTTACAGATAAACGTACCAATTATTATGTTGCTTACTTGCTTGGGAACTGAAGGTTTATTGGTTTAGCATATAACGACTGATTCTATTCATGGTTTAATCTGCATCGAGTTATATTGTTCAGATCTTCATTATCAACAAAGCAATACTATTGTGTTTATCTTAACGTGCTGAATGAATCATCTGAAAACTAGCACTCGATCCCTTATTACTGACTAATATGTGTAGTAATTTATTAGTATATAATTTGCGGTAATATTGTTTAAGTGCATCTTGTGCTCTCATTCCATGGGCTTCTTAGTAATGCAGGTGTAATATATCTAGTAACATAAACATATGTGTGGTCTGCTGTTTTACTTGGTAGAAATATGTTTTCAGAAGTATCTATGTTTCATGCTTCCCGTATCATTTTGTTGTTTTCATCTTTTTCATGATCATCTACTATTATAGCAGCATTTGAAATTCTTGATTCCTTGAAATAAAGGGAAATCATTGAAATATATATATATATATATATATATATATATATACACGGTCATGCTACGTAGTGCGTAGCGCGCCATCGAATAGGTAGCGCCCTCGGGCCTCAAGCCTCCAGTTCAGCGCCTTCGCTTCCTCTTTTGCCGTTCTCACCACCCGATCGACCTTCCCGTTCTCTTTCTCAACCACAGTAAAAAAATAACTGCCTCTCACCATGTGTCACTTTCCCATGGGTCCCACACCATCAAATCAACTTAGTGAAAAAATTACTATCAAGTACTAGAGTTATCAGAAACTAGCACCAACATCCTTCAGTTATATTTTTACTTAACTGTGTTTTTCATTTTCTTTCTGTTAACTGTATTTTCTATAGTTAAATTTTTACTTAACTGAATGTTGCAGTATTGTATTTTTCTTTTTTTCTATTAATTGTATTTTTAGGTACCAATATCCTTTAGTTATATTTTTACTTAACTGCAGTTTTCATTTTATGTTGCAGTATTTTGTATTTTTCGTTTTTGCTATTAGCATTTTCAGGGACAAACAAAAGGTTGCAGTGCAGTAGTACAATTAGTCCCTGTATGGATGGTAAAAATTCACCAACACGTAGAATAATCTATTTCCTTAGGTAAAAGTCAGTAGTAATTTTTTTACTCCACTCTGATGAGTGTACAATGAAGCATAGGTGCAGAAAAGACTACACACGGTAAAAAAGACACGTGGATGGTAGTCAGAATTTAACTATTACGTCAACATAGGTGGGTTCAGGATGGGGGGTGGGGGTGTGCGCAGTTGGTGGGTCTAAATCACTGTGTCAGGTGCCGTTTAATAGGTAGCACCTTAAGGTGCCATATAGTAGCTATACACACACACACACATGCTGTCTTTCTTGCCCCGTGGTCTGTGGATCATGTTTGTTTTTAGTCTAATGCAACTTTTATACCATATAAAAGTATTTATCAATTATCATGCATGCAGTAAAGTTCCCGTGATATATTCATTGCTGTGTGCTTCTATAACATGTCTAATTTTTAGGTATACGTAAGTGATCTTCATGATAAAATGGTTGGAGTTAGTCTGTTTGGCATGGTAACAAGTGTTTGCAAAGCAAGTACATCAGGCACTTACTTTTATTTGGAGATAGAAGATGCAACAGGAGTTGTCCTGATGAAGCTTAACTTCATTGGACTCTGGTATCAGTTTTTGTACTTATGCAATGATCTAGTTTTCCCACTGTCTATTCCCTATTTTGTCTGAAAATGATTTGCTTATTTGACTTAAAATATCACCGGGATTATTTGACTTGAAATACAAACCAAAATTCTTCTTGTACTGATCATAGTGTTGAGTGTCAAATTTGCAATATCCTGGCATATATGCTTTGGTAGTTTGGATGAGTTAATGTGTGCTAGGTTTAAATATAGAAAGCTGGTCAACGTACTAAGTTTCAAACAGTTTGGAGCCTGGCAAATAAATATCCAATTTGCTTTTGCACTGAGCAGGATATCATTGAAATAGGAATTCATCAAGTTTCTTCCATCTAAGAACTGATTGTTTTGTCATTTTCTGTTTCTGTTATCAAATCAATGCTGAGCCTTTGATATTCATTTTATATTGCACCAAATCAATTGCATCCTGCCATAAGAAAAACCAAGTGCATCCTCTTTATCTATTTCCTGTGAACGCGCGATGTTCTGAAGTCTATACCATATCTTTTTTTTTTCTGATTGGAGCTGTTGTTATATGAACTGATGAATTCTGATTAGAAAATTCATGAGGTACCTAAATTGTACACTGTATGCAAGTCTGCATGGTCTTATACAAAGATTTGATGTTATGTTCACTGGTTTTTTTATGTTGATGCCATGTTCTGCCTGACAGCCTGTGGGTAATGAATTCTTAAAGATTAAGGTCCATTTAAAAGTGTGGCATTGACTCTTCAGTGTTCTAAATTCGATCATTTTTGTTTAGTGTTCTTCAGATAAGGTTACCTTTTTTTTTTTTACAAAATTGTCATTTCCTATGCCAGCTCATCTGCCTCTACTATACTTCAATTCGATCCATTTATAGATATATTTATGCAGGTCGCTAGGCAGGGTAGGTGTTGGTCATATGGTGTACATGTCTGGTTTGACTTGTACCTTGAGTTCAACAAACAAGTAAGCACTATATTCCTTTTAATTTCATATGCTCACAATTTAAATGTCGCAATAATTGCTTGATGGTGAAAAATTCTGGTTGGTGGACTATTTGGTGTGACAGGCTTGAAGTCGCGTGGACTGAAAAGGAACCAGGGTCTCTATTTGTTAACATAAGCTTGCTGCCAGCGCTTCTTAATTCAACATGCCTGCATAATTTGTCACTCTTGTCAGATCTTCCCCATTCAACTAATAGAACACATGTAAGTCTTCATTATTATTGTGACATCTTCTGAAGCATTTACATTTTAGTTCTTTTAGATGGAATCGCAGAGTTATCAGTGACATTTTAGAAAGTATTTTCTGGTACCTATTTTGTTTGTTTTAAGAACTTTGCATTCTTCATTTGTGTTGTCGTTCCTAATATCCTGATTGTGTTTGATATCTTAATAAACAGATATGCCATGTTCGACTTGACCACATCGATGTCAACAGTTTGAAGGTATTATTATTCCACAATCTTTGTGGGTGTGTTGTGAGTGATCAATCAGGCGGACTTCAGTGTTCCTTCTGTAAGTGCGCATGCCATATCAGTGGATGTACACATGGCTTTCAGCTTCACTTGACCATTGCAGATGACAGTGAAAAGGTTTTTGCCTGGTGCATTGGGCAAACAGCCGTAGAGTTCCTTCAAATATCTCCTGATGAATATATGGAACTCCCTGAGGTATTAACCAACAAAATTCTTACACATGTACCTAATAATCGAGAACACCTTTTCAATACGCATCACTTGCCACTGCCTGGGATATTTTACGGAACAATTCTGTGGTGATAGTTTTTGCATATAAACTTACCTGGTTCACTGCCAAAGTCTCAGCTTAGTCACTATTGGTCTCATTCCTGCGAACTCATAGGTAGCAAGTCCTGATACTTACATGTTTCGGCACACGAAAACGGTATAGCTAATCCTGTAATTTTGTGCATCATGTAGCATCAGCCTCTTTTTTTCTTTACTAGACTTGTCTATGCCTGCTAAGTTTCTGTTCCTATTCTTATTAAAAATTCCCGGTGATGAATTACCAGGATGAACGAGCAATGTATCTCTATACTCTTCAGAATGAGAATTTTACGGTCGCTATTGCAAATACCAGCCAGCGGATTGAAGCGTATATTGAAGGCGAGAAATTTCTTCCAGTATGGGAGATCACAAGAGCCCAAAAATGCGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013877