BGIOSGA013891

From RiceWiki
Revision as of 10:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013891| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013891, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013891

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013891, complete gene.

LocusTag

OSJNBA0096I06.9

Ensembl Transcript ID

BGIOSGA013891-TA

Ensembl Protein ID

BGIOSGA013891-PA

Length

3015

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39492936..39495950

Sequence Coding Region

39492936..39493138,39493255..39493588,39493660..39493812,39493911..39494207,39494598..39494676
,39494787..39494893,39494961..39495079,39495632..39495950

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39492936..39495950 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39492936..39495950 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGTGTTTGGAGCTGCCGTTCTTGTAGCTTTGGCAGTGACTTGTGGCCTCATCTGGTCGAGGTCAAGAAGGCTATCAAAGGAGATGAGAGACATCCCCGGAACAATGGGCTGGCCTGTCGTCGGCGAGACCTTCTCCTTCATCTCCGGCTTCTCGAGCCCTGCTGGCATTCTGAGCTTCATGCGTGACAGACAGAAGAGGTTCGGCAAGGTGTTCAAGACGTATGTTCTTGGGAGGATGACGGTGTTCATGACGGGGAGGGAGGCGGCCAAGATCCTGCTGTCCGGGAAGGACGGCGTGGTGAGCCTGAACCTGTTCTACACCGGCAAGCAGGTGCTCGGGCCGACCAGCCTCCTCACCACCAACGGCGACGAGCACAAGAAGCTGCGCCGCCTCATCGGCGAGCCGCTCTCCATTGACGCGCTCAAGAAGCACTTCGACTTCATCAACGACCTCGCCGTCCAGACGCTCGACACCTGGCTCGACAGGAGAGTGCTTGTGCTCGAGGAGGCCTCATCTGTAATTATTAAGCTCTTCACGCTCAAGGTGATCGCCAACATGCTGATAAGCTTGGAGCCAGAGGGAGAGGAGCAGGAGAAGTTTCGCGCCAATTTCAAGATCATATCGTCTTCGTTCGCGTCGCTGCCTCTCAAGATCCCAGGAACTGCATTTCACCGTGGCCTCAAGGCCAGGAACCGGATGTACGCGATGCTGGACTCGGTGATCGCCAGGAGGAGGGACGGCGGCGAGGTCCGCAACGACTTCCTCCAGACGCTGCTGCGGAAGCACGCCAAGGACGGCACCGCCGCCGACGAGGACGACGGCGGCGGCGGCGGCGATCGAGACGCGGACAAGCTGACGGACGCGCAGCTCAAGGACAACATCCTGACGCTGCTCGTCGCCGGCCACGACACGACGACGGCGGGGCTGACGTGGCTCATCAAGTTCCTCGGCGAGAACCCGGAGGCCCTGCAGAAACTCAGAGTGATGAACGAGACACTGAGGAGAGCGACCATCCTGCCATGGTTCTCACGAAAAGCCGCTCAGGACTTCAGCATTGATGGGTACGAGATCAAGAAGGGGACGTCGGTGAACCTGGACGTGGTGTCCATCCACCATGACCCGTCCGTCTTCGCCGACCCCTACAAGTTCGATCCAAACAGATTCGATGGGACGTTGAAGCCGTACAGCTTCCTGGGATTCGGCAGCGGGCCGCGGATGTGCCCCGGGATGAGCCTGGCGCGCCTCGAGATCTGCGTCTTCATCCACCACCTCGTCTGCAGATACAGTACTCCAGCAGGCAGCCAAGAAATAAAGCAGCAGGAGCTACTCCGTGGCAAAGTGACGAGGAACAGCTACTTCAGTGGCAAATGTGACAAAGAACAGCAACCACGTAGCATCGCTCAGATATTCAGGTCGCTTAAACATGATCACAGCAGGGCAGTAACAAGGAATGGCACAATCCAAGAAGCAACACAACAGCAGCAACTCCGGAAGGGCCAGGGTCAATGGAACAATAACCAGGTAGCAAAGCCAATCAGAGTAACAAAGAAACACTATGCAAGGCAGCAGTGGCCTTCCCACGCTAAACCGCACATGATAGATTGA</cdnaseq>

Protein Sequence

<aaseq>MAVFGAAVLVALAVTCGLIWSRSRRLSKEMRDIPGTMGWPVVGETFSFISGFSSPAGILSFMRDRQKRFGKVFKTYVLGRMTVFMTGREAAKILLSGKDGVVSLNLFYTGKQVLGPTSLLTTNGDEHKKLRRLIGEPLSIDALKKHFDFINDLAVQTLDTWLDRRVLVLEEASSVIIKLFTLKVIANMLISLEPEGEEQEKFRANFKIISSSFASLPLKIPGTAFHRGLKARNRMYAMLDSVIARRRDGGEVRNDFLQTLLRKHAKDGTAADEDDGGGGGDRDADKLTDAQLKDNILTLLVAGHDTTTAGLTWLIKFLGENPEALQKLRVMNETLRRATILPWFSRKAAQDFSIDGYEIKKGTSVNLDVVSIHHDPSVFADPYKFDPNRFDGTLKPYSFLGFGSGPRMCPGMSLARLEICVFIHHLVCRYSTPAGSQEIKQQELLRGKVTRNSYFSGKCDKEQQPRSIAQIFRSLKHDHSRAVTRNGTIQEATQQQQLRKGQGQWNNNQVAKPIRVTKKHYARQQWPSHAKPHMID</aaseq>

Gene Sequence

<dnaseqindica>1..203#320..653#725..877#976..1272#1663..1741#1852..1958#2026..2144#2697..3015#ATGGCTGTGTTTGGAGCTGCCGTTCTTGTAGCTTTGGCAGTGACTTGTGGCCTCATCTGGTCGAGGTCAAGAAGGCTATCAAAGGAGATGAGAGACATCCCCGGAACAATGGGCTGGCCTGTCGTCGGCGAGACCTTCTCCTTCATCTCCGGCTTCTCGAGCCCTGCTGGCATTCTGAGCTTCATGCGTGACAGACAGAAGAGGTTTTCTTGATTTCTTCAGACAATCAGTGTGCAGTCATGACGATAGCAACATCAACACGATCAGAAGCTGAAATCCTGAAATACTTGGTGTGATGTTTTTTGATTGATCTTGTCAGGTTCGGCAAGGTGTTCAAGACGTATGTTCTTGGGAGGATGACGGTGTTCATGACGGGGAGGGAGGCGGCCAAGATCCTGCTGTCCGGGAAGGACGGCGTGGTGAGCCTGAACCTGTTCTACACCGGCAAGCAGGTGCTCGGGCCGACCAGCCTCCTCACCACCAACGGCGACGAGCACAAGAAGCTGCGCCGCCTCATCGGCGAGCCGCTCTCCATTGACGCGCTCAAGAAGCACTTCGACTTCATCAACGACCTCGCCGTCCAGACGCTCGACACCTGGCTCGACAGGAGAGTGCTTGTGCTCGAGGAGGCCTCATCTGTAATTATTAAGCTCGTAATCAAATCTCAGTTTCTTGAAAATATTGTTTCTGAAACTGAATTTTTGGTTTTTCTTGATTTTGTCAGTTCACGCTCAAGGTGATCGCCAACATGCTGATAAGCTTGGAGCCAGAGGGAGAGGAGCAGGAGAAGTTTCGCGCCAATTTCAAGATCATATCGTCTTCGTTCGCGTCGCTGCCTCTCAAGATCCCAGGAACTGCATTTCACCGTGGCCTCAAGGTACCAATCGATTCCTCAAATAATCAAAAACACCTGCATGATCAGTGACCAAGAGATGGATGATCTCTGAAATCAAAATTGTTTGATCGGTCGAGAAGGCCAGGAACCGGATGTACGCGATGCTGGACTCGGTGATCGCCAGGAGGAGGGACGGCGGCGAGGTCCGCAACGACTTCCTCCAGACGCTGCTGCGGAAGCACGCCAAGGACGGCACCGCCGCCGACGAGGACGACGGCGGCGGCGGCGGCGATCGAGACGCGGACAAGCTGACGGACGCGCAGCTCAAGGACAACATCCTGACGCTGCTCGTCGCCGGCCACGACACGACGACGGCGGGGCTGACGTGGCTCATCAAGTTCCTCGGCGAGAACCCGGAGGCCCTGCAGAAACTCAGAGTAAGCACCGCCGTTTCCATCGATTCGATTGGGTTCGTTGTTGCAAACTTGAGGTTTGTCAGTGCCAATTGCTGTACATACCTGTGTTCTTGGATTGCGCTCCTCGTAAAGTTAGAGGGATGTGGGTCACTGACGTGCGGACCCAATCTTTGTGGGTCCCACATGTCAGTGATAATGTCCCTCCGACTTTACGTCAGAGGAGACTCATCCATGTTCTTGTGCAGGAAGAGCACATGGAGATCAAGGAGAGGCTGGATGGATCATCACATCTCAGATGGTCAGATGTGAACAGCATGCCTTACACCAACAAGGCAAGATTAATCACCATCAATTGATTCTTTTCAGGTGACACTTCATCTCTGAAGATTAATAACTAATACATTGTTGCAGGTGATGAACGAGACACTGAGGAGAGCGACCATCCTGCCATGGTTCTCACGAAAAGCCGCTCAGGACTTCAGCATTGATGGTAGGTAACACATTTGTGTTTCCAATTCATGTGATATTTAAACCGAATTCATGTGAAATCTTAAGTGAAGCACCACTTTGAAATTTCAATTGTGTTGGCGTGGCTGGCAGGGTACGAGATCAAGAAGGGGACGTCGGTGAACCTGGACGTGGTGTCCATCCACCATGACCCGTCCGTCTTCGCCGACCCCTACAAGTTCGATCCAAACAGATTCGATGTAAGTTTGGCAAAAGCAGGGAGTTGAACCATTGTTTGCTGTTGATGATGCATGTTTGTGTATGCAGGGGACGTTGAAGCCGTACAGCTTCCTGGGATTCGGCAGCGGGCCGCGGATGTGCCCCGGGATGAGCCTGGCGCGCCTCGAGATCTGCGTCTTCATCCACCACCTCGTCTGCAGATACAGGTAAATCTATCTGCTCACTTCACCATGGATTGATCTCGCAAGCTTAAGCTAAGCTCGCTCAATCGAATGGTTTTTCAGCTGGACGCCGCTGGAAGACGACGACTCGGTGCAGCCGACGCTAGTGCGAATGCTCAGGAACAAGTACCCCATCGTCGCCGCTGCCATCTGACAACGGCAACTCGACCTGACATTCAGTTTCATCGACGACGAGAGATGAAACGGAAGGGACACTCGAGAGTAGATAGTGCTAGGCTATTCCATGGTTTTACTCTACTATATAAAAAAAATTACACAAACAACACGACACGAATCATCTTTGCATAAAGCCCATGCATCAAATCGGCTTGCTTAATCTTGGATAAGCAATACCCATGAATTGAATACCACTGCAAAATTGCACTCTTGCAGTATATACTGCATGAGTTAAGGTACATCCTATGTTACAAATGTACAGCCGTGAGTTCAATACGTAATCAAAATTCATCAGAGTTAAAAAAAAATGTTTCTGTAGTTCTGTTGCCGATATATACTATTTTGTTGCTATAAACTAAGTACTCCAGCAGGCAGCCAAGAAATAAAGCAGCAGGAGCTACTCCGTGGCAAAGTGACGAGGAACAGCTACTTCAGTGGCAAATGTGACAAAGAACAGCAACCACGTAGCATCGCTCAGATATTCAGGTCGCTTAAACATGATCACAGCAGGGCAGTAACAAGGAATGGCACAATCCAAGAAGCAACACAACAGCAGCAACTCCGGAAGGGCCAGGGTCAATGGAACAATAACCAGGTAGCAAAGCCAATCAGAGTAACAAAGAAACACTATGCAAGGCAGCAGTGGCCTTCCCACGCTAAACCGCACATGATAGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013891