BGIOSGA013902

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Revision as of 10:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013902| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013902, complete gene.| tag = OsI_142...")
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Gene Name

BGIOSGA013902

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013902, complete gene.

LocusTag

OsI_14236

Ensembl Transcript ID

BGIOSGA013902-TA

Ensembl Protein ID

BGIOSGA013902-PA

Length

5036

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39573768..39578803

Sequence Coding Region

39573768..39574171,39574271..39574391,39574779..39574864,39575087..39575483,39575593..39575841
,39576209..39576436,39577235..39577684,39577841..39577913,39578559..39578803

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39573768..39578803 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39573768..39578803 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGTCGAGGGTTCTCGTCTCCTCCTCCTCCTCCTCCTCCTCCGCCGTCGCCGCCGCCGCATTCCTGCCGCGAATTCCGAACCCCTGCGCGAACCCTAGCCACCGCGGCGCGCCTCCTTGCGGGGCGGCGCTCTGGCGGCACCATTCTGGCCGTGCGGTCACCACGGCCGCGGCCGCCGCCGCCACCGGCGACCACTGGGGCGCTGAGTACCACGGCGGCGGAGGCGGGCGCGGCGGGAAGAGCGCCGCGGGCCCCGGCGTGCAGTGCGACGTGGACGTGGTGTCGTGGCGCGAGCGGCGGGTGTTCGCGTCCGTGGCGGTGGCCGCCGACGTCGACACCGTGTGGCGCGTCATCACCGACTACGAGCGGCTCGCCGAATTCATCCCCAACCTCGTTCACAGTGGGAGGATTCCATGCCCGCATCAGGGCCGAGTATGGCTCGAGCAGAGGGGGCTGCAGCAAGCGCTTTACTGGCATATCGAGGCACGCGTCGTGTTGGATCTCAAGGAGGTTCCGGATGCTGTTAATGGACGAGAGCTCCACTTCTCCATGGTTGATGGTGACTTTAAGAAGTTCGAAGGGAAATGGTCCATCAGATCTGGTCCAAGGTCATCTAGTGCAATTTTGTTGTATGAAGTTAATGTGATTCCAAGATTTAATTTCCCAGCAATATTTCTTGAGAGGATCATAAGGTCGGATCTTCCTGTGAATCTTGGAGCGTTGGCCTGTAGAGCTGAAAACATATATTTAGGAAACCAAAGACATGGAACTGCAAAATTTAGTGGTGCAGGCTCCAGGTTTCATAACTTCCGTAATGCAACCACTGAGAATGATGCCATTGCTCCTAGTAAGTTCAAAGAAACACCTCCTTCTGGTCTTGGTGGTGTGCTTGCTTCACCTCCTTCTGAGTTGAACAGCAAATGGGGAGTATATGGAAATGTCTGCAGACTTGATAGGCCATGTGTGGTAGATGAGATCCATCTTCGAAGATTTGATGGTCTCCTGGAACATGAAGGGGCTCACAGGTTTGTGTTTGCTAGTATCACTGTGAAAGCGCCAGTGCGAGAAGTATGGAATATTCTCACTGCATATGAGAAGTTGCCTGAGTTAGTAGTTCTATCTTCCTTCAGTTTTTACAGTTCAGATATCTTGTTATACAAGTATGAGCTAACAAAGTTATCTGTCAGATTTGTGCCGAATCTGGCTATCAGTAGGATTATTCGTCGGGATAATAACAAGGTTCGCATACTGCAGGAGGGTTGCAAGGGTCTACTTTATATGGTTCTTCATGCCCGTGTTGTTATGGATCTTCGCGAGAAACTTGAACGTGAGATAAGCTTTGAGCAAGTTGAAGGTGATTTCTACTCATTTAAAGGAAAATGGCGCCTAGAACAACTTGGTGATCAGCACACCTTATTGAAGTATATGGTTGAGACTAAGATGCATAAAGATACCTTTCTCTCAGAGTCTATCCTTGAAGAGGTCATATATGAAGATCTTCCATCAAACTTATGTGCAATCCGTGATTATATTGAAAAGGCAGAAGCTGAGAGCGGTAACTCCACAAGTAGCTCTATTGTAGCATCAAATGCAGATACTATTGCTATTGATTATGCAGAAGGTAGGCAATCAGAACAAGCATCCACGTCATGTTCTTCGAGTCCTGTGAAGCAGAGACCAAAAGTCCCAGGCCTTCAAAAGGACATTGAGGTCCTCAAATCTGAACTTGAGAAATTTATTGCAAAATATGGTCAGGATGGCTTCATGCCTAAGAGAAAACACCTTCGTTTGCATGGAAGGGTGGATATCGAGAAGGCAATAACACGCATGGGTGGGTTCAGGAAGATTGCCAGCATAATGAATCTTTCACTTTCTTATAAAAACCGGAAACCAAGAGGTTATTGGGATAATCTGGAGAACTTGCAAGAAGAGATCAGGCGATTCCAGAAGAATTGGGGGATGGACCCTGCTTATATGCCAAGTAGAAAGTCCTTTGAGAGAGCAGGACGTTATGACATTGCTCGGGCGTTGGAAAAATGGGGTGGAGTACACGAGGTTTCTCGCCTTCTTTCTCTTGAACTCAGACGACCTAGAAGGCGAGCCAACTCTGATGATGAGAGTAAGGCTGGATCCTCATATGCCATAACAAATAAACACGCAAGCAAGCCAAACAAACCAAGCGTTTCTCCGGACAAACAGAAATGGCTCCTGAAGCTGAAGGATCTGGATGCTAATTGGATTGAGTACTAA</cdnaseq>

Protein Sequence

<aaseq>MTSRVLVSSSSSSSSAVAAAAFLPRIPNPCANPSHRGAPPCGAALWRHHSGRAVTTAAAAAATGDHWGAEYHGGGGGRGGKSAAGPGVQCDVDVVSWRERRVFASVAVAADVDTVWRVITDYERLAEFIPNLVHSGRIPCPHQGRVWLEQRGLQQALYWHIEARVVLDLKEVPDAVNGRELHFSMVDGDFKKFEGKWSIRSGPRSSSAILLYEVNVIPRFNFPAIFLERIIRSDLPVNLGALACRAENIYLGNQRHGTAKFSGAGSRFHNFRNATTENDAIAPSKFKETPPSGLGGVLASPPSELNSKWGVYGNVCRLDRPCVVDEIHLRRFDGLLEHEGAHRFVFASITVKAPVREVWNILTAYEKLPELVVLSSFSFYSSDILLYKYELTKLSVRFVPNLAISRIIRRDNNKVRILQEGCKGLLYMVLHARVVMDLREKLEREISFEQVEGDFYSFKGKWRLEQLGDQHTLLKYMVETKMHKDTFLSESILEEVIYEDLPSNLCAIRDYIEKAEAESGNSTSSSIVASNADTIAIDYAEGRQSEQASTSCSSSPVKQRPKVPGLQKDIEVLKSELEKFIAKYGQDGFMPKRKHLRLHGRVDIEKAITRMGGFRKIASIMNLSLSYKNRKPRGYWDNLENLQEEIRRFQKNWGMDPAYMPSRKSFERAGRYDIARALEKWGGVHEVSRLLSLELRRPRRRANSDDESKAGSSYAITNKHASKPNKPSVSPDKQKWLLKLKDLDANWIEY</aaseq>

Gene Sequence

<dnaseqindica>1..404#504..624#1012..1097#1320..1716#1826..2074#2442..2669#3468..3917#4074..4146#4792..5036#ATGACGTCGAGGGTTCTCGTCTCCTCCTCCTCCTCCTCCTCCTCCGCCGTCGCCGCCGCCGCATTCCTGCCGCGAATTCCGAACCCCTGCGCGAACCCTAGCCACCGCGGCGCGCCTCCTTGCGGGGCGGCGCTCTGGCGGCACCATTCTGGCCGTGCGGTCACCACGGCCGCGGCCGCCGCCGCCACCGGCGACCACTGGGGCGCTGAGTACCACGGCGGCGGAGGCGGGCGCGGCGGGAAGAGCGCCGCGGGCCCCGGCGTGCAGTGCGACGTGGACGTGGTGTCGTGGCGCGAGCGGCGGGTGTTCGCGTCCGTGGCGGTGGCCGCCGACGTCGACACCGTGTGGCGCGTCATCACCGACTACGAGCGGCTCGCCGAATTCATCCCCAACCTCGTTCACAGGTCCACATTCCATCTCTCCTTCTCGTGTGTCATTGCAAATTCTCGCATGCTCATTGAGGGTCTAATTGGGGGAAATTTGTGCGTCGTTCGGCAACGCAGTGGGAGGATTCCATGCCCGCATCAGGGCCGAGTATGGCTCGAGCAGAGGGGGCTGCAGCAAGCGCTTTACTGGCATATCGAGGCACGCGTCGTGTTGGATCTCAAGGAGGTTCCGGATGCTGTACGTGAAGTGATCACCCTAACCTCGTTTTGTTATGTTGCAACTAAATTAGTCGTGATTTTCGTTTTTCACGAGGTAATTAAGATGCAATTGAAACATATAGATGGTTAGGTTAGGTGAACATTTGAGCTGAATGCATGAGAATATTTGTAGATTTGTTCCTGACATCCCATGGCATGAACGAACCTAGCCGTCATCTTCTACTGTTAACCTTTCTGAATGCGTTGATTCTTGTGGTGAAACTATCTTGATGTTACACCATATTTGGCGTTTAGTTGTATAAATTTTAGATAGCGAATTTAAAGAGGTGTTGACTATTGAATGATTCTCCTAATTTCCTAGTTATTATATCAAGCTATTCTTCCTTATTAAACAGTCAACATCCAGGTTAATGGACGAGAGCTCCACTTCTCCATGGTTGATGGTGACTTTAAGAAGTTCGAAGGGAAATGGTCCATCAGATCTGGTCCAAGGTGGAGATTTCATGGTCATCGTCTTGTCTTGTTTATTGCATATGCCTTCGATGATCGTCCAGACTGTTTGCTTACTGAGTTACCAGTTACTTACATTTTTGGCAGCCACATGATGCTCTGATCTAGAATTCGTGGATCCTTAAACATCTTCATGTTTTAGCTAGCAAAAAAGTAATGCCAGTTTAGAGGTCTCATATGACATTTTGTTTCGTTTTATGACAGGTCATCTAGTGCAATTTTGTTGTATGAAGTTAATGTGATTCCAAGATTTAATTTCCCAGCAATATTTCTTGAGAGGATCATAAGGTCGGATCTTCCTGTGAATCTTGGAGCGTTGGCCTGTAGAGCTGAAAACATATATTTAGGAAACCAAAGACATGGAACTGCAAAATTTAGTGGTGCAGGCTCCAGGTTTCATAACTTCCGTAATGCAACCACTGAGAATGATGCCATTGCTCCTAGTAAGTTCAAAGAAACACCTCCTTCTGGTCTTGGTGGTGTGCTTGCTTCACCTCCTTCTGAGTTGAACAGCAAATGGGGAGTATATGGAAATGTCTGCAGACTTGATAGGCCATGTGTGGTAGATGAGATCCATCTTCGAAGATTTGATGGTCTCCTGGTAACTTACTAAATTTGTATGCATCTAAGAATTATCATTGGGTTCTTATATTTTGATGGGAAGCACACTGACAGATTTGTCTTCCCCTCGTGAAATGATTTGATTGAAGGAACATGAAGGGGCTCACAGGTTTGTGTTTGCTAGTATCACTGTGAAAGCGCCAGTGCGAGAAGTATGGAATATTCTCACTGCATATGAGAAGTTGCCTGAGTTAGTAGTTCTATCTTCCTTCAGTTTTTACAGTTCAGATATCTTGTTATACAAGTATGAGCTAACAAAGTTATCTGTCAGATTTGTGCCGAATCTGGCTATCAGTAGGATTATTCGTCGGGATAATAACAAGGTTCGCATACTGCAGGTGGGAGCTTTGCTAAATACTTATCTCATACGTTACTGAATTAGCATCTTAAGTCTAGAGGTGGGATTGCTCCTTTTCTATAGAAAGCGTCAATCCTCAATTTCACTTTCTGGTTGATAGCTAGCTTAGGTTTTCACTTTTAGTCCAAGCTACCAAGTGATCTATCATTTTTACCAAGTCTTGCAACTTCATGCTTTTATGTACCTATCACTCCAGAATACTAAACAAATGGAATTTAGCTTTTGTCCTAAAAATGGGAAGAAAGATCACCTTCTCCTCCCAAAAGATACTTTTTCTGGAAGAATTTAATTCAATTTGGTTGTTTCATGAGCTTTGCAAGAACTGCAACATCTCATATCTTTTATAGGAGGGTTGCAAGGGTCTACTTTATATGGTTCTTCATGCCCGTGTTGTTATGGATCTTCGCGAGAAACTTGAACGTGAGATAAGCTTTGAGCAAGTTGAAGGTGATTTCTACTCATTTAAAGGAAAATGGCGCCTAGAACAACTTGGTGATCAGCACACCTTATTGAAGTATATGGTTGAGACTAAGATGCATAAAGATACCTTTCTCTCAGAGTCTATCCTTGAAGAGGTATAAGAAATTTATATGCATGTAGTTTATCAATAAATATAGAGAACACGTTAATGTTATGAAGTGGAAAAATGGTAATTGAAATACGCTTTGTTGTGCCCCTGAATTTCAATTGTGGTTCACTGAGGACCAATTGTACTAATACTATTTAATCCAGGGGTATATGTTCATAATAATTGGTTTTGATGCTTGGTGATTAAGTTTTCAAAGCAACTTTCTGATGGATGTATCATCTAGTTGAGCATAACATCGTGCTATTGTGCTCATGCGAAAACTTTTAGTCTTTATGTTCACCAGAAATTCAGTAAAAATAAACACCTTCCTGAAAAATGAATGAATCTCTAAATTCTGAATAGGTGTATAAGCACACATCCTCTATCTGTATTATCCTGCGTTGCTTCATTTGGTTAGTGCAAGAATAATAGTTCCATATTTTATTATCTCTGGATAACCTCACATGGATTTTTTCCCCCTCTCGTCAGTACCAAAAACTTGTTTAAACAGCTTTTTATAAGATATCCTCATGACGCAGACATTGCGCTTTATTAAACTTAGTTGTACCGTCACATTCTTTAAGGATATCTAATCTTATGACTTGATGCTATTTGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTTTTTGCCCACTCTTTCTTCTTATCAAAAGCTGATTTATGCATGGTCATGGTGCTTTGATAAACATGTTAATGATTTTTTTTTTGCTAAAAGAAAACAAACATTTTGATTACGTACCTCAGGTCATATATGAAGATCTTCCATCAAACTTATGTGCAATCCGTGATTATATTGAAAAGGCAGAAGCTGAGAGCGGTAACTCCACAAGTAGCTCTATTGTAGCATCAAATGCAGATACTATTGCTATTGATTATGCAGAAGGTAGGCAATCAGAACAAGCATCCACGTCATGTTCTTCGAGTCCTGTGAAGCAGAGACCAAAAGTCCCAGGCCTTCAAAAGGACATTGAGGTCCTCAAATCTGAACTTGAGAAATTTATTGCAAAATATGGTCAGGATGGCTTCATGCCTAAGAGAAAACACCTTCGTTTGCATGGAAGGGTGGATATCGAGAAGGCAATAACACGCATGGGTGGGTTCAGGAAGATTGCCAGCATAATGAATCTTTCACTTTCTTATAAAAACCGGAAACCAAGAGGTTATTGGGATAATCTGGAGAACTTGCAAGAAGAGGTAATGAAAAGTATATACCCCTCCTCCCACTGTGTTCTACAGGGCTTTAGTAGTTCAGAATGCTAAAAATTGTGATCTGAGATTTCCAGCATGAGGAGTGATAATGAGCACTCCTTTCATTCTTGACATGTTATTAACAGTAACCATTATATACAGATCAGGCGATTCCAGAAGAATTGGGGGATGGACCCTGCTTATATGCCAAGTAGAAAGTCCTTTGAGAGAGCAGGTATTTGATTATTTTTGTCTAAATATTTGCTATGGTCAATTTATTATCTATATTTTCTTAGTGTAGTTTATCTGGCAGTTGATAAACCTTATAGAGTTATACAAAGTCATTCTGACTTTTTTCTGGTCAAAATTATTGAAGCCATGTTTGACTGAGGTGTTTTGAACAAAATTTTTCCCATGCTTGCTTAAGGTACCTGGAAACCTTGGACCCTTTTTTTTCTCTGGGGCATGAAAATATGTTCAGTTTCCTCTAATCATATTAAAATTTTGGCAAATTTGGTTATATAGCATCGAAAGTTCACGTTTTTGGTTTTATAGCACCGAAAGTTACCGGTTCACTTTAATAGCACCCAAAGTTCACCATGTTCCCATTTTTAACACTTCCGTCAATTCTCGATCGTCAGGCCAGATATATATACATGTTAAGATTGGTGAATTCAGTAGTTTTTTTAGAGCGGTGAATTGAGGAGTTGACTACATAGCAACATAGCATTCATGGATGCCATTCCTTTATGTCAGACTGATGTTTGTAACAACCTTATTGCCTGGGTTCCTATCATGCTAGTTTTACCAGTTCTCTCTTTTGTCAAGAACTCACAATCTTTCTTTATGAATAATGCTCGTACTTTGTTGTTAATGATAGGACGTTATGACATTGCTCGGGCGTTGGAAAAATGGGGTGGAGTACACGAGGTTTCTCGCCTTCTTTCTCTTGAACTCAGACGACCTAGAAGGCGAGCCAACTCTGATGATGAGAGTAAGGCTGGATCCTCATATGCCATAACAAATAAACACGCAAGCAAGCCAAACAAACCAAGCGTTTCTCCGGACAAACAGAAATGGCTCCTGAAGCTGAAGGATCTGGATGCTAATTGGATTGAGTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013902

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013902&oldid=58725"