BGIOSGA014086

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Revision as of 03:52, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014086| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014086, complete gene.| tag = OS04G06...")
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Gene Name

BGIOSGA014086

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014086, complete gene.

LocusTag

OS04G0677800

Ensembl Transcript ID

BGIOSGA014086-TA

Ensembl Protein ID

BGIOSGA014086-PA

Length

4174

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33802928..33807101

Sequence Coding Region

33807020..33807101,33806624..33806785,33806295..33806489,33805657..33805734,33804942..33805252
,33804712..33804822,33804133..33804623,33803875..33804043,33803387..33803626
,33803140..33803274,33802928..33803056

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33802928..33807101 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33802928..33807101 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAATTGCATATTATGGTAGGGCTTCTGTTGCATAATCAGGCAGAGTTTAACATGGTTGATATCAACCCAGATTCTGACGATAACCGGTCTGATCCTCAGGAGCCATCAAGAAATCCTGGCATTTGGCAATGCACCATTTGCGAACACGGAAATGATGCAAAAAAAATATCATGTGAGCAATGCGGTGTTCTTCGATATTTCTCGCTGTATTTCAATAATGCCCTTGAAGTTGATGGCAGAGCTAAACGGAGAGACAAGCATTATGCGGTATCTGTACTGGCAAGAACTCTTTTCTCACCATCCAGTGCCAAGTCAAAAGACGTTGTTCTTTCTGGTGGCTTTAAAGCTAGCAGAAATGCAACAGGAAGTACACGAGCTACGTTGGATGCGCTGCATAAGACATACATGACCCGTAAAGAATGCCACATTAACATAGTGCCTTTCAAGTTTGATACACCATCTCCGGATGACGTGGTCGCTACAGGACTAAAATCGTCGAGAAGTTTTAGAAAAGATGCTCCCCATGTCACTGAAAAGAGGGTGATGGATAATGATAGTTCTACACCTGAGAAGGATACAACTGCAGACTCAAATTTGCCTGTAAAGTCGAATGAATTCGGTGAAAGTAGTGAGAGTGTTTCTGTTGGTAGTCAAAATGAAACACTTTGCTTGGACCATGAGCTACAGCATTTGAGTTTGGAGAGGAAGTCACAAAAAAGTAAAGCCAATATTAAAAAGCCAGTTTCTTCATCCCTGTACAAGCCAGAACCATGGATGCTCCAGCATGAAGATGAAGGCATCCCTAGACAATTAAATCTTGCTATTGTTGGCCATGTCGATTCTGGGAAATCAACTCTATGTGGTCGTTTGTTACATGCCCTGGGGAGGATTTCAAAAAAGCAAATGCATAAATATGAGAAGGAAGCTAAAGAAAAGGGGAAAGGATCATTTGCATATGCTTGGGCAATGGATGAGAGTGCTGATGAAAGGGAGCGTGGCATTACAATGACTGTCGGTGTTGCATACTTTGACACCAAAAATTACCATGTTGTTTTGCTGGACTCCCCTGGCCACAAAGATTTTGTTCCTAATATGATATCTGGAGCAACACAATCTGATGCAGCTATCCTAGTTATTGACGCTTCTATAGGATCATTTGAAGCAGGTATGGGCATCAATGGGATTGGACAGACAAAGGAGCACTCGCAGCTTGTTAGAAGCTTTGGCGTGGATAACTTGATAGTTGTTGTTAACAAGATGGACTCGGTGGAATATTCAAAAGAGCGATTTAATTTTATCAAATCACAGCTTGGTGCTTTTCTGCGGTCATGCGGTTACAAAGACTCAGCAGTTGCCTGGGTTCCAATTAGTGCAATGGAGAATGAGAACTTAATGACAACAGCTTCAGATACTCGACTATCATCATGGTATGATGGAAATTGCCTGTTGAAAGCCATTGACACATTACCGCCTCCTTCTCGTGATGTTTCAAAGCCACTGCGCCTTCCAATTTGTGATGTCTTTTCGTCACATAAGCTGGGGCAAGTTGCAATTGGTGGTAAAGTAGAGGTTGGAGCAACCCGAAGTGGTTCTAAGATCCTCGTCATGCCTTTTGGGGAGTTAGCTGTGGTGAAAACTATTGAGCGGAATTCCTCTAGTTGCAATTTAGCAAGAGCTGGGGACAATGTCGCTATTGGTTTGCAAGGGATTGACCCTAGTCATGTCATGCCTGGCGGAGTCATATGCCATCCAGATTACCCTGTGTCCGTGGCTTCTTGCTTGGAGCTAAAAATTTTGGTCCTAGATATCACTGTACCAATACTGGTTGGCTTGCAGTTTGAGCTCCACATCCATCATGCGAAGGTGTCTGCAAGCATGGTGAAAATACTGTCATTGCTGGAGCAGAAGACCGGCAAAGCCTCAAAGAAGATACCACGATTTCTCACCTCGAGACAGACTGCTGTAATCGAGGTGAAGCTGGAGAAAGAGGTATGCGTGGAAGAATTCTCAAACCTGAAAGCGCTAGGCCGAGTGTTCCTACGATCTCAGGGAAACACCATCGCGGTTGGCATTGTGAGCCGAGTACGAGAGCAGGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MELHIMVGLLLHNQAEFNMVDINPDSDDNRSDPQEPSRNPGIWQCTICEHGNDAKKISCEQCGVLRYFSLYFNNALEVDGRAKRRDKHYAVSVLARTLFSPSSAKSKDVVLSGGFKASRNATGSTRATLDALHKTYMTRKECHINIVPFKFDTPSPDDVVATGLKSSRSFRKDAPHVTEKRVMDNDSSTPEKDTTADSNLPVKSNEFGESSESVSVGSQNETLCLDHELQHLSLERKSQKSKANIKKPVSSSLYKPEPWMLQHEDEGIPRQLNLAIVGHVDSGKSTLCGRLLHALGRISKKQMHKYEKEAKEKGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKMDSVEYSKERFNFIKSQLGAFLRSCGYKDSAVAWVPISAMENENLMTTASDTRLSSWYDGNCLLKAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMPFGELAVVKTIERNSSSCNLARAGDNVAIGLQGIDPSHVMPGGVICHPDYPVSVASCLELKILVLDITVPILVGLQFELHIHHAKVSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLRSQGNTIAVGIVSRVREQA</aaseq>

Gene Sequence

<dnaseqindica>1..82#317..478#613..807#1368..1445#1850..2160#2280..2390#2479..2969#3059..3227#3476..3715#3828..3962#4046..4174#ATGGAATTGCATATTATGGTAGGGCTTCTGTTGCATAATCAGGCAGAGTTTAACATGGTTGATATCAACCCAGATTCTGACGGTGCGTGTGGTCTGGTGGCAATCCTAGAGACAGTAAAGTTGATGATCTCATCATAAGAGATGGTGAGTTACTACTAGAGTGCTTTTGCTACCTTTGCCTTCATTGATGGGTGTTTGGATTTACGGAATTTACTTGGTGCTCACTTTTTTTTTCTCAGAATCACAAGTATTTCATGAAAACATCTAGATAGGGTTTGCTTGGTACTAACTCCTCTCTAGTTTATTCCTGAATTAGATAACCGGTCTGATCCTCAGGAGCCATCAAGAAATCCTGGCATTTGGCAATGCACCATTTGCGAACACGGAAATGATGCAAAAAAAATATCATGTGAGCAATGCGGTGTTCTTCGATATTTCTCGCTGTATTTCAATAATGCCCTTGAAGTTGATGGCAGAGGTATAGTGTATTCCATGTTGTTCCATTCCCTGGTATGGTTAGTTTTTTGTTGCACTGTTGACTTATGGCTTTGATTAGATATATTTATGTTTTCTAGCCTGTTAATTTATTTATTTTTCTATCATGACATCCAGCTAAACGGAGAGACAAGCATTATGCGGTATCTGTACTGGCAAGAACTCTTTTCTCACCATCCAGTGCCAAGTCAAAAGACGTTGTTCTTTCTGGTGGCTTTAAAGCTAGCAGAAATGCAACAGGAAGTACACGAGCTACGTTGGATGCGCTGCATAAGACATACATGACCCGTAAAGAATGCCACATTAACATAGGTACACTGCATTTGTACATCAAGCGCTTTTGGTAATTTGATTTGTTTAATTTATGGCATTATCCAAATTCTTGTAGTTATATGTACTTGCTGCTATATATAAACCAGATATTTAATGTTGTATGATTCTATATATGCTAGTCATTTGCATAGCTTAACTCTCAATTGCCTCATTGTGCATCTGGTGTGACTACCATTTTGGGTGTAAAATTTTCCTGTTTCAAAACCAAGTGACTGTCTGAACTATAAGCTTAGCTAGCCTGCCATGGTCCTTCTGCAAACAAACAAACTGAAGCACATATGTGGGAGGTAGCTTACAGGTCTTGGGAGTTTACAGGGTTTTATATAATTTGGTTTACCTGAACTTTGAAATATGAAGATAGTCAGTGTAAATTTTAACCTACTTATGAATGTTCAGTTCTTCCCCTGAATTAGGGTAAGCATTCAGTTGACCCGTGTTTTTCCAATGGGAGATCCATATGTTGAACTTATGTTTCATTTATTTATTAGACTTCCTGATGGAGAAATCTGTAATATGACTGCATATCTTCATGTTCACAGTGCCTTTCAAGTTTGATACACCATCTCCGGATGACGTGGTCGCTACAGGACTAAAATCGTCGAGAAGTTTTAGAAAAGGTATTATCTCTGCATTCCCCCACTCCCATGTAGTTAGACTAACTCAGACTAGTGAAAAGGATGCATCTTAACAACTTAACATTAACATCTATATGTGAAACCTTTATTTTCTTTTCTATGCGCAAGTCTTTGTGGAACCTTTTCAGTTAATTAGTTTGATTAGAGTTTATGCTGAATGAGTTAGTCTGGTCAGATAGAGAACTACTGTGTGCCAACACACTTGAACATTTGAACTGTTCCTTGTTATAGATATTGTTATTTTCAAAATTTATGTGGTTGGTACCAATGAAAGGTTATGCTAAGATAGTTTTCTAAACAAAGTTTCTTTTCCACACTTGAATAATTTTGGTTGTGCAGTGCGTGCTATAGTTCCATAGTAACTTGATTCACATCAGTTGACACAGATGCTCCCCATGTCACTGAAAAGAGGGTGATGGATAATGATAGTTCTACACCTGAGAAGGATACAACTGCAGACTCAAATTTGCCTGTAAAGTCGAATGAATTCGGTGAAAGTAGTGAGAGTGTTTCTGTTGGTAGTCAAAATGAAACACTTTGCTTGGACCATGAGCTACAGCATTTGAGTTTGGAGAGGAAGTCACAAAAAAGTAAAGCCAATATTAAAAAGCCAGTTTCTTCATCCCTGTACAAGCCAGAACCATGGATGCTCCAGCATGAAGATGAAGGCATCCCTAGACAATTAAATCTTGCTATTGTAAGCAACTACATATCTATATATACACGATATATTTGATATATCCATCATTTTGCTTATTACTTGTTTGCCTTCTATCTGCCTATCTTTATGAATAACTCAAACCAGAAACATGCTAGGTTGGCCATGTCGATTCTGGGAAATCAACTCTATGTGGTCGTTTGTTACATGCCCTGGGGAGGATTTCAAAAAAGCAAATGCATAAATATGAGAAGGAAGCTAAAGAAAAGGTTCTCTTATTTTAATGATTGATGTTATCTCAGTATGTGCCTTTTATGCATCTTGGGAGCTGTTCATATATAACGTTTCTTCTTCCAGGGGAAAGGATCATTTGCATATGCTTGGGCAATGGATGAGAGTGCTGATGAAAGGGAGCGTGGCATTACAATGACTGTCGGTGTTGCATACTTTGACACCAAAAATTACCATGTTGTTTTGCTGGACTCCCCTGGCCACAAAGATTTTGTTCCTAATATGATATCTGGAGCAACACAATCTGATGCAGCTATCCTAGTTATTGACGCTTCTATAGGATCATTTGAAGCAGGTATGGGCATCAATGGGATTGGACAGACAAAGGAGCACTCGCAGCTTGTTAGAAGCTTTGGCGTGGATAACTTGATAGTTGTTGTTAACAAGATGGACTCGGTGGAATATTCAAAAGAGCGATTTAATTTTATCAAATCACAGCTTGGTGCTTTTCTGCGGTCATGCGGTTACAAAGACTCAGCAGTTGCCTGGGTTCCAATTAGTGCAATGGAGAATGAGAACTTAATGACAACAGCTTCAGATACTCGACTATCATCATGGTAATAGATATTCCCTATGGTAAACCTGCATATCCCTTGACCTTAAAACCTGGTGGTTGTTCGCCAACGTAATTGATGCATGGTGTCAGGTATGATGGAAATTGCCTGTTGAAAGCCATTGACACATTACCGCCTCCTTCTCGTGATGTTTCAAAGCCACTGCGCCTTCCAATTTGTGATGTCTTTTCGTCACATAAGCTGGGGCAAGTTGCAATTGGTGGTAAAGTAGAGGTTGGAGCAACCCGAAGTGGTTCTAAGGTATCACCCTGCTGTTATTCTAAGCACATACTACAATACATTTGTCTTTGTTTCTTATATTGCCTTAGTGCGAGATATTTATGTATGGTTGAACATCACTTGTTGTGTTCTAACTATATCTTTTGCACTGTTTTCGTTGTCCTACCACTTTTCCGTCTAAATAATGTTGTGCTCAATGATTAAATAACTATGCTTTTGCCTGTAAGATGTTCAAGCAGTTTCCTGATTTCATGGTACTCTTGTTTCAGATCCTCGTCATGCCTTTTGGGGAGTTAGCTGTGGTGAAAACTATTGAGCGGAATTCCTCTAGTTGCAATTTAGCAAGAGCTGGGGACAATGTCGCTATTGGTTTGCAAGGGATTGACCCTAGTCATGTCATGCCTGGCGGAGTCATATGCCATCCAGATTACCCTGTGTCCGTGGCTTCTTGCTTGGAGCTAAAAATTTTGGTCCTAGATATCACTGTACCAATACTGGTTGGCTTGCAGGTAAGCAAAAGAGGGGAGCATATCTCTTCAACTGTTCATGCTTCATTTATTTTTTAAAGAGAACTTCAGGCCTAATATCGACACCTTACATGGTCGCTACCCATGTTTCTAGTTTGAGCTCCACATCCATCATGCGAAGGTGTCTGCAAGCATGGTGAAAATACTGTCATTGCTGGAGCAGAAGACCGGCAAAGCCTCAAAGAAGATACCACGATTTCTCACCTCGAGACAGACTGCTGTAATCGAGGTAAGCTTACAGCAGATGGATGGGGTAGTTTTGTTGCTGATATCATGTTTGTTGTCTCTGTAACGCTTGGTGTTTTCTTTCAGGTGAAGCTGGAGAAAGAGGTATGCGTGGAAGAATTCTCAAACCTGAAAGCGCTAGGCCGAGTGTTCCTACGATCTCAGGGAAACACCATCGCGGTTGGCATTGTGAGCCGAGTACGAGAGCAGGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014086

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