BGIOSGA014123

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Revision as of 03:53, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014123| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014123, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014123

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014123, complete gene.

LocusTag

OSJNBA0043A12.39

Ensembl Transcript ID

BGIOSGA014123-TA

Ensembl Protein ID

BGIOSGA014123-PA

Length

2649

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33350525..33353173

Sequence Coding Region

33353146..33353173,33352591..33352795,33352389..33352502,33352206..33352293,33352002..33352087
,33351794..33351896,33351549..33351646,33350956..33351385,33350525..33350836

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33350525..33353173 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33350525..33353173 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCCAATAGCCTCAAAACTGGAGGCCTCTTGCTTCCGACCATTGAGAGGCAATGTGCTTCGCCTCCATCCGTCATCGTGATCGGTGGGGGAATTTCAGGGGTTGCAGCAGCCCGTGCTCTCTCCAATGCTTCGTTTGAGGTGACTGTTTTGGAGTCCAGAGATCGCGTAGGCGGTCGTGTCCATACCGATTACTCTTTCGGATGCCCAATTGATATGGGAGCCTCATGGCTCCACGGCGTTTGTAATGAGAACTCCTTGGCACCATTGATTGGCTATCTTGGGCTGAAATTATATCGCACTAGTGGCGACAACTCTGTTCTGTATGATCATGATTTAGAAAGTTATGCACTCTTTGATAAGGCTGGCCATCAGGTCTCAAAGGAGACAGTTGCTAAAGTTGAAGAAACATTTGAAAGAATTCTTGATGAGACAGTTAAAGTGCGTGATGAGCAGGAACATGACATGCCCCTTCTACAGGCGATTTCACTTGTTCTTGAGAGGCACCCCCATCTGAAGTTACAAGGGATAGATGATCAAGTCTTGCAATGGTGTGTCTGTCGGCTTGAGGCATGGTTTGCTGCAGATGCTGATGAAATATCTCTGAAAAACTGGGATCAGGAGCATGTTCTTACCGGTGGCCATGGTCTGATGGTGAACGGATACTATCCTATAATTCAGGCTCTTGCACAAGGTCTAGATATCCGGCTTAATCAAAGGGTAACCAAAATTGCCCGCCAATTCAATGGAGTGACAGTTACCACTGAAGATGGAACAAGTTACTCTGCCGATGCTTGCATCATTACAGTACCGCTCGGTGTGCTCAAGGCAAACATAATCAAGTTCGAGCCTGAGTTGCCCTCATGGAAGAGCTCTGCAATCGCAGACCTTGGTGTCGGTATCGAGAACAAGATCGCCATGCACTTCGATACAGTCTTCTGGCCTAATGTTGAGGTGCTGGGAATGGTTGGCCCAACGCCTAAAGCATGTGGGTACTTCCTGAACCTCCACAAGGCCACCGGCAATCCGGTCCTCGTCTACATGGCCGCCGGTAGATTTGCTCAAGAAGTGGAAAAACTGTCAGACAAGGAGGCCGTTGATCTGGTCATGTCTCACCTGAAGAAAATGCTACCTGACGCCACTGAACCTACGAAGTATTTGGTTTCACGCTGGGGTTCTGACCCGAACTCGCTGGGTTCCTACTCGTGCGACCTGGTCGGGAAGCCGGCCGACGTGTCGGCGCGGTTCGCCGCACCGGTGGAGAACCTCTACTTCGCCGGCGAGGCGGCCAGCGCCGACCACTCGGGGTCCGTCCACGGCGCCTACTCGTCGGGGATCGCCGCCGCCGATGAGTGCCGGAAGCGCATCCTGATGCAGAAGGGCATCCCTGACCTCGTCCAGGTCAAGGCCTACGAGGAGATGGCCGGAGTCATTGCTCCCCTTCAGATTTGCAGGACCTGA</cdnaseq>

Protein Sequence

<aaseq>MDPNSLKTGGLLLPTIERQCASPPSVIVIGGGISGVAAARALSNASFEVTVLESRDRVGGRVHTDYSFGCPIDMGASWLHGVCNENSLAPLIGYLGLKLYRTSGDNSVLYDHDLESYALFDKAGHQVSKETVAKVEETFERILDETVKVRDEQEHDMPLLQAISLVLERHPHLKLQGIDDQVLQWCVCRLEAWFAADADEISLKNWDQEHVLTGGHGLMVNGYYPIIQALAQGLDIRLNQRVTKIARQFNGVTVTTEDGTSYSADACIITVPLGVLKANIIKFEPELPSWKSSAIADLGVGIENKIAMHFDTVFWPNVEVLGMVGPTPKACGYFLNLHKATGNPVLVYMAAGRFAQEVEKLSDKEAVDLVMSHLKKMLPDATEPTKYLVSRWGSDPNSLGSYSCDLVGKPADVSARFAAPVENLYFAGEAASADHSGSVHGAYSSGIAAADECRKRILMQKGIPDLVQVKAYEEMAGVIAPLQICRT</aaseq>

Gene Sequence

<dnaseqindica>1..28#379..583#672..785#881..968#1087..1172#1278..1380#1528..1625#1789..2218#2338..2649#ATGGATCCCAATAGCCTCAAAACTGGAGGTATGAATTATTCCCACTTTTTTGTAATTTTTTTTTCTGAAATTTTATCTGGTAGGAGTACTTGGTAGTGGTGCGTCGTGAAAGGTGGGAATATTTCCCATTGATCATAGTATTTTTAGAAATCTATCTATTGTACTTTAGAATTAAATTTTCCACATAGGGAAGGTGATCATCACACTTTAGATTTTACAAGATTATTAGAATTTATAATTCTAGTTGGGTACAAATTGGTTAGTTAGTTGGTAACTTGGGTATCTACAGTATTATGTAGATTAGTGAGCTTGATGTTCAACGTGATTTCTCTCTCTTATGATTCACATACCTGACAGTAAAAAACATTTTTTGTTCAGGCCTCTTGCTTCCGACCATTGAGAGGCAATGTGCTTCGCCTCCATCCGTCATCGTGATCGGTGGGGGAATTTCAGGGGTTGCAGCAGCCCGTGCTCTCTCCAATGCTTCGTTTGAGGTGACTGTTTTGGAGTCCAGAGATCGCGTAGGCGGTCGTGTCCATACCGATTACTCTTTCGGATGCCCAATTGATATGGGAGCCTCATGGTCAGTCTCACCCTGAATTGTTAGTGTGAGAAATTCACTTTAGATTCTGTTCATACAAGCTTACTTACTGTTCATTCCAAAAATTCAGGCTCCACGGCGTTTGTAATGAGAACTCCTTGGCACCATTGATTGGCTATCTTGGGCTGAAATTATATCGCACTAGTGGCGACAACTCTGTTCTGTATGATCATGATTTAGAAAGGTAATCTTTTAGCTCTTGATCTTACGCTTTTCTTTACCGATCCGCACAATCCTTGTTGATTCTTACATCAACTCTGTCAATTGATTCTGTTACAGTTATGCACTCTTTGATAAGGCTGGCCATCAGGTCTCAAAGGAGACAGTTGCTAAAGTTGAAGAAACATTTGAAAGAATTCTTGATGAGGTACATAATGAACTCATTTATACTTGGTACTTCTGGTGCCGTTTGAAGAGCATGTTCAGTTCACTATCTAATTTCTGTTGCATTAATGTTCCAAAAAAAATTTTCTGTTGCATTGCAGACAGTTAAAGTGCGTGATGAGCAGGAACATGACATGCCCCTTCTACAGGCGATTTCACTTGTTCTTGAGAGGCACCCCCATCTGAAGTATGCACATTCTTGTACCATGCTATCAATTTACTCACAACATACTTAATAAATTCCTAGGATGCATCATGAGAGGTTGACTGATATGGTTACCATTATTTGTAGGTTACAAGGGATAGATGATCAAGTCTTGCAATGGTGTGTCTGTCGGCTTGAGGCATGGTTTGCTGCAGATGCTGATGAAATATCTCTGAAAAACTGGGATCAGGTTAGCTGAAATCAGTCTATATTAGCACACTGCACATTCTTATAGTGACATTAGTTTGCTTAGTGAAGGATATTGGTAAATTACATCGAATTGTTTGCCATCTTGCATAGTTAGTTACTTATGTTTGTATTCCTCTTAACTATGCAGGAGCATGTTCTTACCGGTGGCCATGGTCTGATGGTGAACGGATACTATCCTATAATTCAGGCTCTTGCACAAGGTCTAGATATCCGGCTTAATCAAAGGTGTGTTCTTTTACCTCCCGAGCATACAAACACAACAATTAATTTCAGCATACTGAAGTCCCTTTTTCAGTGTATTTTGGCTCCACAAAATTACTTGTCGTTTCACTTGTCAATATTGCTAAACAGTTTTGCTTACTCGCTTTTGCTACTGCTAAATCTTCAGGGTAACCAAAATTGCCCGCCAATTCAATGGAGTGACAGTTACCACTGAAGATGGAACAAGTTACTCTGCCGATGCTTGCATCATTACAGTACCGCTCGGTGTGCTCAAGGCAAACATAATCAAGTTCGAGCCTGAGTTGCCCTCATGGAAGAGCTCTGCAATCGCAGACCTTGGTGTCGGTATCGAGAACAAGATCGCCATGCACTTCGATACAGTCTTCTGGCCTAATGTTGAGGTGCTGGGAATGGTTGGCCCAACGCCTAAAGCATGTGGGTACTTCCTGAACCTCCACAAGGCCACCGGCAATCCGGTCCTCGTCTACATGGCCGCCGGTAGATTTGCTCAAGAAGTGGAAAAACTGTCAGACAAGGAGGCCGTTGATCTGGTCATGTCTCACCTGAAGAAAATGCTACCTGACGCCACTGAACCTGTGAGTTTGCCATCTCAGATCATGGCCACAGTTAGTTCCATTTTCGAGTTCGCATTATCTGAATGAATTCGTTGTTCTTGCGACTGACAATTTGCACTTGTTGATTTGTGTTATTGCAGACGAAGTATTTGGTTTCACGCTGGGGTTCTGACCCGAACTCGCTGGGTTCCTACTCGTGCGACCTGGTCGGGAAGCCGGCCGACGTGTCGGCGCGGTTCGCCGCACCGGTGGAGAACCTCTACTTCGCCGGCGAGGCGGCCAGCGCCGACCACTCGGGGTCCGTCCACGGCGCCTACTCGTCGGGGATCGCCGCCGCCGATGAGTGCCGGAAGCGCATCCTGATGCAGAAGGGCATCCCTGACCTCGTCCAGGTCAAGGCCTACGAGGAGATGGCCGGAGTCATTGCTCCCCTTCAGATTTGCAGGACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014123