BGIOSGA014126

From RiceWiki
Revision as of 03:53, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014126| Description = cDNA clone:002-105-C09, full insert sequencecDNA| Definition = Oryza sativa Indica Group BGIOSGA014126, complete gene....")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014126

Description

cDNA clone:002-105-C09, full insert sequencecDNA

Definition

Oryza sativa Indica Group BGIOSGA014126, complete gene.

LocusTag

OS04G0670600

Ensembl Transcript ID

BGIOSGA014126-TA

Ensembl Protein ID

BGIOSGA014126-PA

Length

3333

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33321860..33325192

Sequence Coding Region

33324844..33325192,33324604..33324807,33323519..33323772,33321860..33322411

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33321860..33325192 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33321860..33325192 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGCCTCGCGCTCCTCGCCGTCCCCGTCGCGCTCCTCCTCTCCCTCTCCTTCCTCCTCCTGCGCCCCGCCTCCCCGCCGCTCCCCTTCTCGCGGCAGCAAGCGGCGTCCGGCCCCGACCGCCGCCGCCTCCTCAGGGTCTACGTTGCGGAGCTCCCCCGCGCGCTCAACCACGGCCTCCTCGACCTCTACTGGTCGCTCCCCGCCGCCGACTCCCGCATCCCGGCCTCCTCCGACCCCGACCACCCGCCGCCGCGGCCTCCGCGCGCGCACTCGCCGTACCCGGATAGCCCACTGATTAAGCAGTACAGCGCCGAGTACTGGCTCCTCGCCTCCCTCCAGCCGGACTGGAGGGACGCGGATGTGGTGTTCGTCCCCTTCTTCGCGACGCTGTCCGCGGAGATGGAGCTCGGGTGGGGCGCCAAGGGCGCGTTCCGCAGGAAGGAGGGGAACGAGGACTACCGCCGCCAGCGGGAGGTCGTCGACCGCGTCACCGCCCACCCAGCGTGGCGGCGCTCCGGTGGCCGTGACCACGTCTTCGTCTTGACAGACCCTGTGGCGATGTGGCATGTCCGTAAAGAGATTGCTCCTGCAATTCTTTTGGTGGTTGATTTTGGCGGATGGTACAAACTTGATTCAAACTCTGCAAGCAGCAATGTTTCTCATATGATACAGCATACGCAAGTGTCATTGCTCAAAGATGTCATTGTACCTTACACTCATTTGCTCCCTACAATGCACTTATCAGAGAATAAGGACCGCCCCACTCTTCTGTACTTCAAGGGAGCCAAACACAGGCATCGGGGTGGTTTGGTACGGGAGAAACTATGGGACTTGATGGTTAATGAGCCTGATGTTGTCATGGAAGAAGGTTATCCTAATGCCACAGGACGTGAACAATCAATAAAAGGGATGCGGACATCAGAGTTTTGCTTGCACCCAGCTGGTGACACCCCAACTTCATGTCGTCTCTTTGATGCTGTTGCTAGTCTGTGCATACCTGTCATTGTCAGCGATGAGATTGAGCTGCCCTTTGAAGGGATGATAGATTACACAGAATTCGCCATTTTTGTCTCAGTCAATAATTCTATGAGACCAAAATGGCTCACAAACTACTTAAGAAATGTCCCCAGGCAGCAGAAAGATGAATTCCGAAGAAACATGGCTCACGTCCAGCCTATATTTGAGTATGATAGTATTTACCCAGGTAGGATGGCCTCTGCTGCACAAGATGGTGCTGTGAACCACATCTGGAAAAAGATTCACCAGAAGTTGCCGATGATTCAAGAAGCGGTTACCCGAGAGAAGCGAAAACCTGATGGAACATCGATCCCTCTTCGGTGCCATTGTACATGA</cdnaseq>

Protein Sequence

<aaseq>MARLALLAVPVALLLSLSFLLLRPASPPLPFSRQQAASGPDRRRLLRVYVAELPRALNHGLLDLYWSLPAADSRIPASSDPDHPPPRPPRAHSPYPDSPLIKQYSAEYWLLASLQPDWRDADVVFVPFFATLSAEMELGWGAKGAFRRKEGNEDYRRQREVVDRVTAHPAWRRSGGRDHVFVLTDPVAMWHVRKEIAPAILLVVDFGGWYKLDSNSASSNVSHMIQHTQVSLLKDVIVPYTHLLPTMHLSENKDRPTLLYFKGAKHRHRGGLVREKLWDLMVNEPDVVMEEGYPNATGREQSIKGMRTSEFCLHPAGDTPTSCRLFDAVASLCIPVIVSDEIELPFEGMIDYTEFAIFVSVNNSMRPKWLTNYLRNVPRQQKDEFRRNMAHVQPIFEYDSIYPGRMASAAQDGAVNHIWKKIHQKLPMIQEAVTREKRKPDGTSIPLRCHCT</aaseq>

Gene Sequence

<dnaseqindica>1..349#386..589#1421..1674#2782..3333#ATGGCGCGCCTCGCGCTCCTCGCCGTCCCCGTCGCGCTCCTCCTCTCCCTCTCCTTCCTCCTCCTGCGCCCCGCCTCCCCGCCGCTCCCCTTCTCGCGGCAGCAAGCGGCGTCCGGCCCCGACCGCCGCCGCCTCCTCAGGGTCTACGTTGCGGAGCTCCCCCGCGCGCTCAACCACGGCCTCCTCGACCTCTACTGGTCGCTCCCCGCCGCCGACTCCCGCATCCCGGCCTCCTCCGACCCCGACCACCCGCCGCCGCGGCCTCCGCGCGCGCACTCGCCGTACCCGGATAGCCCACTGATTAAGCAGTACAGCGCCGAGTACTGGCTCCTCGCCTCCCTCCAGCCGGGCTCGTCGTCCGCGCCCGCCGTCAGGGTGGTCGCGGACTGGAGGGACGCGGATGTGGTGTTCGTCCCCTTCTTCGCGACGCTGTCCGCGGAGATGGAGCTCGGGTGGGGCGCCAAGGGCGCGTTCCGCAGGAAGGAGGGGAACGAGGACTACCGCCGCCAGCGGGAGGTCGTCGACCGCGTCACCGCCCACCCAGCGTGGCGGCGCTCCGGTGGCCGTGACCACGTCTTCGTCTTGACAGGTACTGTGATTCAGTTGGAAATTGGAAATGTGCTTTTTATTTTTTCCTGAGTGAACTTAAGTGATCAAAATGGCATAATGGAACGGGCTGTTGATCATATTAACCCTCCATTGCTCCCAATTGGTGTGGGTTATATGTTAAGCATTCGATAGGTTAAGTTATGCTTGTTGTCCGTCTATTATATACTCAATCCCAACTCTCAACTAGTATATGATTGGAAACTAGTTTTTTCTCCTCCATACTCAATCCCACTTTCTGACTGATATCTACAGGGTTTAGCTACTCAACTCTAAAAACTGTGAGCTGATTTAGGCTTGAAATCATTTTGTGTGTTCTGTTAGTTACCGGCTATACATGTGATTTGTTGCTCGGCGCCTCAGTGTAAGACTTACCAAGTTCCCTTTTCCAAACAGAGGGAGTGTGCCCAGAACAGTGAGCACATTGACATGTAGATTTAACCATGACAGGAACCTCACAATGCACTCATAAATTTGAAATTAGTTATGTGCATACTTGGAATAGGGGGGTCAAGGTAGCTGGTTTTGGTTTCTTAGGCACGCTTTACATGTTTTCTTGTGTAAGGGAGTGGCATACCCTTGAAATGCCATCATTAAAGAAAAACAATTTTGAACCATGTGACTTTCTGTACATTTGTCATCAAGGGGATATTGGTAATCCTCAGTGTTTCGGAGCAAAAGACACAACTGTTTTGCAAGCAATGTAGGAATACAAGATATACTGTTTATGTTTTCGTTGTAATTGATCTGCATAGTAGCTTATTATTCTTTTGTATGCTCAGGTTTTGTTAAATATTGAGGCATTCTTTGACAGACCCTGTGGCGATGTGGCATGTCCGTAAAGAGATTGCTCCTGCAATTCTTTTGGTGGTTGATTTTGGCGGATGGTACAAACTTGATTCAAACTCTGCAAGCAGCAATGTTTCTCATATGATACAGCATACGCAAGTGTCATTGCTCAAAGATGTCATTGTACCTTACACTCATTTGCTCCCTACAATGCACTTATCAGAGAATAAGGACCGCCCCACTCTTCTGTACTTCAAGGGAGCCAAACACAGGCATCGGGTTCGTACCATTTATCATACTAATAAGCATTTAATGTATGCATGGCAATATTTATCTTCTTTGTAGTATCTGAATCTAAGCAATTGGAAATGAAAATGGAATAAAAGAACATGTTAGTATGATATGGGCTATCTTAAAATTTTATTTTAGAACCTGTTGAGTCTGAATCCACAGCTCTTTGATATTATTTAGAGTAAAGTCCATCACCGGTCCCTAAACTTGTATCGTTGTGTCATCCCGGTCCCTAAACTCGCAAATCGACCGTTCAGGTTCTCAAACTTGTTCGACTGTGTCATCCCGGTCCCTAAACTTGTAGATCACTCGTATAGGTCCTCCAACTTGTTCAGTTGGTGTCACCTCAGTCCCTAAACTTGGATTTGAATATCATCTGGGTCAAATAGGACGGTTTAAAGACTTTATATTTAAAAATAATTCATAACTTTTTCATGTGAACTCTAATGAAGACAAACTTTATATCAAACTTGTAGCCCTCGACGCGATCTACAACTTTGTAGTTGATATTTTTTTTTATTTTAAGTCATTTTTTGTCCCAGAATGTAATTTTAAAATTAAAATTACAAAATCTATAAACATGCAACAATATTTTGGGACCCTAAACAGTTTTAATTCAAAAAATTTTCAACTACAAAGTTGTAGGTCGCGTCGAGCGCTACAATTTTGATATAAAGTTTGTCTTTATTAGAGTTCACATGAAAAAGTTATGAATTATTTTTTGATATAAAGTTTTTAGACCGTCCTGTTTAGAGACCGGGGTGACACAACTGAACAAGTTGGAGGACCTAAACGAGTGATCTGCAAGTTTAGGGACCGGGATGATACAGTCGAACAAGTTTAAGGACCTGAACGGTCGATTTGCGAGTTTAGGGACCGGGATGACACAGCGGTACAAGTTTAGGGACTGGTGATGGACTTTACTCTATTATTTATGTATCTACAAGGAAACTATTGCCATTTGAAGCATTATGCTCTCAACAGAACTTTTATTTACAAACCAGCTTTGTTTATGACTTATGAGATTGTTGTTCTGTACTACTGTGCATCTCTATACAGCTTTATCTTACTATAACTTCTGAAATTTTCTTTCAGGGTGGTTTGGTACGGGAGAAACTATGGGACTTGATGGTTAATGAGCCTGATGTTGTCATGGAAGAAGGTTATCCTAATGCCACAGGACGTGAACAATCAATAAAAGGGATGCGGACATCAGAGTTTTGCTTGCACCCAGCTGGTGACACCCCAACTTCATGTCGTCTCTTTGATGCTGTTGCTAGTCTGTGCATACCTGTCATTGTCAGCGATGAGATTGAGCTGCCCTTTGAAGGGATGATAGATTACACAGAATTCGCCATTTTTGTCTCAGTCAATAATTCTATGAGACCAAAATGGCTCACAAACTACTTAAGAAATGTCCCCAGGCAGCAGAAAGATGAATTCCGAAGAAACATGGCTCACGTCCAGCCTATATTTGAGTATGATAGTATTTACCCAGGTAGGATGGCCTCTGCTGCACAAGATGGTGCTGTGAACCACATCTGGAAAAAGATTCACCAGAAGTTGCCGATGATTCAAGAAGCGGTTACCCGAGAGAAGCGAAAACCTGATGGAACATCGATCCCTCTTCGGTGCCATTGTACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014126