BGIOSGA014217

From RiceWiki
Revision as of 03:54, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014217| Description = Japonica Group Os04g0649400 (Os04g0649400) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA014217, complete gene....")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014217

Description

Japonica Group Os04g0649400 (Os04g0649400) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA014217, complete gene.

LocusTag

NM_001060617.1

Ensembl Transcript ID

BGIOSGA014217-TA

Ensembl Protein ID

BGIOSGA014217-PA

Length

880

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32100905..32101784

Sequence Coding Region

32101539..32101784,32101179..32101460,32100905..32101087

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32100905..32101784 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32100905..32101784 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCTTCACCATCTGCATGTGGCCTACCTGGATCACAAAGCGTCGTCGTCCTCGTCGTCTCCGGCGCCACCATCCATCTCCCCGTCGTCGATCCCCGGATCGGCCGCCTTCCCTGCTTTCTCCTTCAAATGCCTCCGCCCGCTCGCGCCCAAGATCTCGCTGCCGGAGCCGAGGAAGATGATCGCGCCGCCGGACTTCGTCGTCCCTCGCGCCAGAAACGCTTCCAAGCTGCTCAACTACACTGTGCAGGTGCCGGCGGCGGGGACGACGAGGTGGAACCCGTCGGCGGAGCAGATTAAGGTGCTGGAGATGCTGTACCGCGGCGGGATGCGGACGCCGAACTCCGTCCAGATCGAGCGGATCACGGAGGAGCTCGGCAAGTACGGCCGGATCGAGGGCAAGAACGTCTTCTACTGGTTCCAGAATCACAAGGCCCGCGAGCGCCAGAAGCAGAAGCGCGCCGCCCTCCTCACCCTCAGCACGCTCGACCCTTCCTTGCTGCCCGCTACCGCTAACGAAACCAAAGAGGCACCGGAGAAGAAGGAGAAGGACGTGGAAGATGGATTGGCGAGCTGCAAGCGGCGGTGCAAGGCGTGGGGTGACGGCGCCGGCGATGGCGACGCGGTGGTGGCGACGGAGGCGGCCGGCGGCTGCACCGACGAAGTGACCCTGGAGCTCTTCCCGTTGCATCCCCAGGGAAAAGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MRLHHLHVAYLDHKASSSSSSPAPPSISPSSIPGSAAFPAFSFKCLRPLAPKISLPEPRKMIAPPDFVVPRARNASKLLNYTVQVPAAGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAALLTLSTLDPSLLPATANETKEAPEKKEKDVEDGLASCKRRCKAWGDGAGDGDAVVATEAAGGCTDEVTLELFPLHPQGKA</aaseq>

Gene Sequence

<dnaseqindica>1..246#325..606#698..880#ATGAGGCTTCACCATCTGCATGTGGCCTACCTGGATCACAAAGCGTCGTCGTCCTCGTCGTCTCCGGCGCCACCATCCATCTCCCCGTCGTCGATCCCCGGATCGGCCGCCTTCCCTGCTTTCTCCTTCAAATGCCTCCGCCCGCTCGCGCCCAAGATCTCGCTGCCGGAGCCGAGGAAGATGATCGCGCCGCCGGACTTCGTCGTCCCTCGCGCCAGAAACGCTTCCAAGCTGCTCAACTACACTGTTAGACACATCAAACCCTACTTGTTCTTGATCGATCGATCGATCAGGTTCATGATCGTGTATATATTTGGTTTGCAGGTGCAGGTGCCGGCGGCGGGGACGACGAGGTGGAACCCGTCGGCGGAGCAGATTAAGGTGCTGGAGATGCTGTACCGCGGCGGGATGCGGACGCCGAACTCCGTCCAGATCGAGCGGATCACGGAGGAGCTCGGCAAGTACGGCCGGATCGAGGGCAAGAACGTCTTCTACTGGTTCCAGAATCACAAGGCCCGCGAGCGCCAGAAGCAGAAGCGCGCCGCCCTCCTCACCCTCAGCACGCTCGACCCTTCCTTGCTGCCCGCTACCGCTAACGAAACCAAAGTAATTAATCAGCAAATTAACCGAATTTTAATAATCCATGAATCTGTAGACATTTCTGCCCGGCTAATAGACATTTTTTGCGTGTATATAGGAGGCACCGGAGAAGAAGGAGAAGGACGTGGAAGATGGATTGGCGAGCTGCAAGCGGCGGTGCAAGGCGTGGGGTGACGGCGCCGGCGATGGCGACGCGGTGGTGGCGACGGAGGCGGCCGGCGGCTGCACCGACGAAGTGACCCTGGAGCTCTTCCCGTTGCATCCCCAGGGAAAAGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014217