BGIOSGA014222

From RiceWiki
Revision as of 03:54, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014222| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014222, complete gene.| tag = OsI_176...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014222

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014222, complete gene.

LocusTag

OsI_17679

Ensembl Transcript ID

BGIOSGA014222-TA

Ensembl Protein ID

BGIOSGA014222-PA

Length

4415

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31985999..31990413

Sequence Coding Region

31990057..31990413,31989857..31989972,31989666..31989774,31989451..31989565,31988253..31988263
,31987398..31987504,31987029..31987278,31986883..31986936,31986616..31986759
,31986460..31986524,31986239..31986293,31985999..31986157

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31985999..31990413 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31985999..31990413 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCAGCCTTCTGATCCAGTCCGTCGACTTCACCGACGACGCGGCCGCGGCCGCGGCCACCGCCGTCGCCGCCGGCGAAACCAGCGGCACCTCTCACCCCCTCTCCCCGCGCTCCGGCGACCCTCTCCCCATCACCACCTCCGCCTCCGTAACGGCGCCTCTCGAGCTGCCCGGCGCGACCTCCGCCTCGCCCGCCCGAAACCCTAAGATCAACTACACCCGCGGCATCCTACACCTCTACCGCTCCTCCTCCTCCTCGTCGACCGCCTCCTACGCTTCCGCCGTCGCCGCTACTCCATCCTCCTCCTCCTCCGGACCCGCCGCCCCGCAGCTCGCCTCCGACTGCCTACTCCCGCCATGGCGCGGCACACGGCTCCTGGTGCTCGCCGTCCCAACCCACGTCTCACCAGACGAGTTCGTCCGCTTCTGCGGCCCTTACATCGAGCACGCCTCCGATATCCATGTCGTCAGGGATGATGGGGTGGAGGACCGGTATAGCGTGCTCGTGGAGTTTGAGGATCAGAAGAGTGCCGATGGGTTCTACTTGGACCTCAACGGTTGGAGGTTCTCGTCATCCGAGGTAGAGGTTTGCCATGTTCTGTTTATAGTTGCTGTCCAATATACACCATCAACCAAGCCTGCGGTGACTCCACCAGTTGGATCCACTGAGCTCCCAACATGTCCTGTCTGTATTGGTGGGGACCAGGTTTGCCAGTTTTGTCAGAAGCAGTCTAAGAATCCTACATGTTCTGTTTGTCAAACCTCCGGAAACCTATGGATCTGTATAATATGTGGTTTTGTTGGATGTGGGAGGTATGAAGAAGGCCATGCAATTAGGCACTGGAAAGAAACTCAGCACTGCTATTCACTTGATTTGGAAACTCAACGTGTTTGGGATTATGTTGGTGACAGTTACGTCCACCGACTTAATCACTCCAAAAGTGATGTGAAGCATTCCAAGTTCAAGTCAAAGTGTAAATATTCTGGTGACAAATGTGCAAACTGCTCCTGCAATGATGAGGAAGATATCGGTGGTGCTATTTTCAGCAGCAAAGCAGAAACAATTGTGGATGAATACAACCGTCTTCTTGCTAGCCAACTTGAAACTCAGAGAGAGTATTATGAGGCTCGGCTGTCAGAAGCTAAGAAAGAAAAGGAACAACACATTTCTGATGCAGTGGATAAAGCTGTAAATGATAAGAGTAAAGAAATCCAACAAAAGATTGAGAATGCAATGTTGGAGAAAAAGAAACTTGCAGATATGAATGAAAAACTCACGAAGAACCAGGATATATGGCGTCGAACACTAAAAGAAATAGAGGAAAGGGAGAGGGCTCAACTGAAGTTGAAAGATGATACAATTCGTGATCTAGAAGAACAGATAAAAGATTTCAAATTTTCCATCAAGTTACAGAAATCAATCGAGAAGAATAAAAATGCTGATGATCTCAAAGGAGGTTTGCTGGTGCCACTCCCAATGGTGCCAGATTCTGGAACCAAAGGTAAAAGATCGTCAAGAACAAGCAAGAGGAGGAACTAG</cdnaseq>

Protein Sequence

<aaseq>MFSLLIQSVDFTDDAAAAAATAVAAGETSGTSHPLSPRSGDPLPITTSASVTAPLELPGATSASPARNPKINYTRGILHLYRSSSSSSTASYASAVAATPSSSSSGPAAPQLASDCLLPPWRGTRLLVLAVPTHVSPDEFVRFCGPYIEHASDIHVVRDDGVEDRYSVLVEFEDQKSADGFYLDLNGWRFSSSEVEVCHVLFIVAVQYTPSTKPAVTPPVGSTELPTCPVCIGGDQVCQFCQKQSKNPTCSVCQTSGNLWICIICGFVGCGRYEEGHAIRHWKETQHCYSLDLETQRVWDYVGDSYVHRLNHSKSDVKHSKFKSKCKYSGDKCANCSCNDEEDIGGAIFSSKAETIVDEYNRLLASQLETQREYYEARLSEAKKEKEQHISDAVDKAVNDKSKEIQQKIENAMLEKKKLADMNEKLTKNQDIWRRTLKEIEERERAQLKLKDDTIRDLEEQIKDFKFSIKLQKSIEKNKNADDLKGGLLVPLPMVPDSGTKGKRSSRTSKRRN</aaseq>

Gene Sequence

<dnaseqindica>1..357#442..557#640..748#849..963#2151..2161#2910..3016#3136..3385#3478..3531#3655..3798#3890..3954#4121..4175#4257..4415#ATGTTCAGCCTTCTGATCCAGTCCGTCGACTTCACCGACGACGCGGCCGCGGCCGCGGCCACCGCCGTCGCCGCCGGCGAAACCAGCGGCACCTCTCACCCCCTCTCCCCGCGCTCCGGCGACCCTCTCCCCATCACCACCTCCGCCTCCGTAACGGCGCCTCTCGAGCTGCCCGGCGCGACCTCCGCCTCGCCCGCCCGAAACCCTAAGATCAACTACACCCGCGGCATCCTACACCTCTACCGCTCCTCCTCCTCCTCGTCGACCGCCTCCTACGCTTCCGCCGTCGCCGCTACTCCATCCTCCTCCTCCTCCGGACCCGCCGCCCCGCAGCTCGCCTCCGACTGCCTACTCCCGGTAACCTCTCTTCCTTGGTACCATCTTATTTACTAATTTGTTCATTTCCGCGTGTTCTCATGCCTCATCGCCTGCGTATCTCAGCCATGGCGCGGCACACGGCTCCTGGTGCTCGCCGTCCCAACCCACGTCTCACCAGACGAGTTCGTCCGCTTCTGCGGCCCTTACATCGAGCACGCCTCCGATATCCATGTCGTCAGGTGAATTATCCTTCTCGTTGAAGCAATTTGTGTCCGACTTTGCCCGGGAAGCTATGGTTTTACATATGTGTTGTGTCGGTAGGGATGATGGGGTGGAGGACCGGTATAGCGTGCTCGTGGAGTTTGAGGATCAGAAGAGTGCCGATGGGTTCTACTTGGACCTCAACGGTTGGAGGTTCTCGTCATCCGAGGTTACTAACATTGTCGATTGGATGTATGTCTAGTTTGCTGATCATGTGTAACATTGCTCCTAAATTGGGAAGCTCGCTCGCTTCTTGTTCCATGGTGTAGGTAGAGGTTTGCCATGTTCTGTTTATAGTTGCTGTCCAATATACACCATCAACCAAGCCTGCGGTGACTCCACCAGTTGGATCCACTGAGCTCCCAACATGTCCTGTCTGTATTGGTGAGCTTATTTATGTTTTTCTCCTTGTTTTGTGGTCATTCAACAACGTCAGATATGAATTTTGTCCACTACAATTTTGCTTCGTATCACCTCCCCATAGGCTGGGAAGATATCAATTTGCAATGCCCCCTCTGATCAAAATATTAGCCACTTCTCTTCTGAGAAACTACACCTGTGAAGTTGAGACTTGAGAAGCTACATACTCACCACATGTTTGTGGTGTCTTAATTTCACCATATATATGTTAACCTTATTTTTGGAGGTATACATTGCCTATCGATTTCGGTACTGTTTTTTTTTCTTTCTTTCTAAAAGCTGACTTTGGGGTGCTATTTTTCCAAGCTACTACTATACCAGTAAGCTCTGTCAAATCTAGGGACCATGTTATTTCTCCTTGGGCAATATGGATTACATAATTATAGTTAAGACCTTGTTTTCAGGTCTATCTATTAACTTATGTGTTTAACTATCTTGTGCAAGTATGCATAGGTACACACTTCCTCTGTTTATTGGGAAGAGTTTTTCTGAACATTTTAATGTATCATTTTTTTCTCATCTTTTCACCATCTTCTTATGCATGTTATGAAACAGAAAGATTGGATCAAGACATCAGCGGAATTATGGCAACGACTTGTGATCATTCGTTCCAGTGTTCATGTGTTTCAATGTGGGTCAATTCATCTTGTCCGGTAATGATCATTTTGACAATCACCATTTCTCAATTAGGGCAACAAACAACCATTTGTTATGGCTGTGATTCTTTTCTTGCTTACATTTTTACATGACACTGAATTTGCCTCAATTTTATATAAATTTTGAGTCAATCCATTCTATGCCATCGACAAAGTGCGGGTTCTACAATATGCCACCAACAAGGCTCAGTTCTACAATATACCATTGAACAACTTGTTTTCTTCCTTATCCGCCGTTAGTCAACCATTAGTCAGATGCAGCTAAGGGAGGAAAAATGACCAATGCCATGTTGCATTAAATAATCTTGGAAGATAAAAACACAATTGATTCCTATTTTTCATCAATGAGAAAAAATAGTGGATCATGACCAACGAAATCCATGAGCACACATGATACCCTAGGGGTAAAATGGATATATTCTCCAATCTCGCCCTTAGAGCAGGTACAATAGCAGACTAAGCCAGCTATAAACAATAGTAATGTGTGTATGACAGGTGGGGACCAGGTATTAATAGTGTAGTAAGCAACTATTGTATGAATTAGCTATTACATTGGCTATAGATGATTTGGAGCTAGTAGTTGGCTATACTATTAAACTTGCCCTTAACAGAGTTTGACTAATGGCTGACTAGCGGCTATGGCATATAAGGAAGAAAACTAATGGCTCGATGGTATATAATAGAACTGAGCTTTGTGACATATTGCAGAATCTGTGCTTTGTCAATGGCATAGAAATATAGAATGGATTATCTCTAAATTTATATTCTTCCAATTTTGAATTTTTGAGTAATCTTCTATGGCACTGATTAACGTAGTAGTTCGAATTCCATACCAATACCCAATATGTGGCCATTTATCAAGTGTGATCGAATTCCATATCAATATCCAATAAAATATGTGGTCATTTATCAAGTATGATATTGTACATTTGCTACTCAGTAGGAACTTACCAGGGACAGAGGTCAGGGTCATTTGCAGAATGTTCACCTTCTGTATTTTTCTTGAAGATCACTGAATGTTTATGGCACCTGTTTACCTGTGTCGGTGAATCTTAAGACATATTGGGCTAACCAGACTTATGGAGCGTAGAGTTGTAGATGTGCCAATGTCTGCCTATGGCTATAATATTGCCACCACTCACCACTATAACCATATGACATTGATTTCCTTGTATTAAGATCCTCCATTGCCTTTTCACATTACCAAGCTTTCTTGATCATGACTTGTTTTTATTCATAATATTTCTGTTTCAGGTTTGCCAGTTTTGTCAGAAGCAGTCTAAGAATCCTACATGTTCTGTTTGTCAAACCTCCGGAAACCTATGGATCTGTATAATATGTGGTTTTGTTGGATGTGGGAGGTATGCTACTCTGCTAATTGAATTTTTGGAGCATTTTGCGAATCTCTTTGTATTTAATAATCTGAATGAAAGAAAGTTAATGGCATGATTACTGTTTGTGAATTTCTTTGTTATTACAGGTATGAAGAAGGCCATGCAATTAGGCACTGGAAAGAAACTCAGCACTGCTATTCACTTGATTTGGAAACTCAACGTGTTTGGGATTATGTTGGTGACAGTTACGTCCACCGACTTAATCACTCCAAAAGTGATGTGAAGCATTCCAAGTTCAAGTCAAAGTGTAAATATTCTGGTGACAAATGTGCAAACTGCTCCTGCAATGATGAGGAAGATATCGGTGGTGCTATTTTCAGCAGCAAAGCAGAAACAGTAATTGCTTTAAGATTCATTCATTTCAGTTAATCTTTGACACCTCATTGCCAGTCTGGTTCCTCAAATCACATATGCTCTTCTCATAACAGATTGTGGATGAATACAACCGTCTTCTTGCTAGCCAACTTGAAACTCAGAGAGAGGTTCATCCCTTATTAGTGCTTATCTTTTGATGTCACAATCTGTACTACCAGAGCTTGTCATATAATTTACATTGCAGTTTATATCTGATATATTTATCTGCCTATGTTTCCTTATATTCATAGTATTATGAGGCTCGGCTGTCAGAAGCTAAGAAAGAAAAGGAACAACACATTTCTGATGCAGTGGATAAAGCTGTAAATGATAAGAGTAAAGAAATCCAACAAAAGATTGAGAATGCAATGTTGGAGAAAAAGAAACTTGCAGATGTGAGCATCTCAAATCATGCACCTTTCAGTTATTATCAAGCATAATTGCTGTGGTTCTTTGACGTGACTTGGTACTTTGCCTTTCCTGCAGATGAATGAAAAACTCACGAAGAACCAGGATATATGGCGTCGAACACTAAAAGAAATAGAGGAAAGGTATGTTTTGACCCTTCCACCAGAAAATGGAAGTAGATGGCACAGTGAAAGGTGTTGGATCGTGCTAAATTCTGATTTTTAGATTTCTAGTTTTGCCTTCCTATCATAAAGATCCACAACTTTCCCTTTTTCTTTCCTGATAAATCTACACTTCTACACTCAACAGGGAGAGGGCTCAACTGAAGTTGAAAGATGATACAATTCGTGATCTAGAAGAACAGGTGCTAAACTCTCTTTCCTCTTGAAAACACTGCAGTTTATACAAAGGCCATTAGTTAACATGCCTTATACAATATCTGCAGATAAAAGATTTCAAATTTTCCATCAAGTTACAGAAATCAATCGAGAAGAATAAAAATGCTGATGATCTCAAAGGAGGTTTGCTGGTGCCACTCCCAATGGTGCCAGATTCTGGAACCAAAGGTAAAAGATCGTCAAGAACAAGCAAGAGGAGGAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014222

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA014222&oldid=63116"