BGIOSGA014289

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Revision as of 03:56, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014289| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014289, complete gene.| tag = OsI_175...")
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Gene Name

BGIOSGA014289

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014289, complete gene.

LocusTag

OsI_17557

Ensembl Transcript ID

BGIOSGA014289-TA

Ensembl Protein ID

BGIOSGA014289-PA

Length

5130

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31155088..31160217

Sequence Coding Region

31158909..31160217,31158429..31158622,31157899..31158031,31157481..31157717,31157259..31157362
,31156088..31156298,31155088..31155290

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31155088..31160217 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31155088..31160217 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGCAGCAACCGCCAACATTTTCCACCTTAGCCTCACCTTCTTCTTCATGGTCCTCCTTACTCTCGGAACATCTGCCGCCGGCGTTGCATCGGACACTCTGAGCAATGGCCGCAACCTCACTGACGGCAACACGCTCGTGTCGGCCGGTGGCTCCTTCACTCTGGGCTTCTTCTCACTCGGCTTGCCAAGCAGGAGATACCTCGCGATATGGTTCTCCGAGTCCGCGGACGCCGTCTGGGTGGCCAACCGTGACAGCCCACTGAACGACACCGCCGGCGTACTGGTTAACAATGGCGCGGGCGGGCTCGTCCTACTCGACGGCTCCGGCAGGGCCGCCTGGTCGTCGAACACGACTGGCAAGTCTTCATCAGCGACGGCGGCGCAGCTGCTGGAGTCCGGAAACCTCGTCGTGCGCGAGCGCGACCAGCTGAACACCGGTGTCTTCATCTGGCAGTCGTTCGATCACCCGTCGAACACACTGATCGCCGGCATGAGGCTCGGCAACAACCGGCAGACCGGCGACGCGTGGTTCCTCTCGTCGTGGCGCGCGCACGACGACCCGGCGACGGGAGACTGCCGCCGCGTGCTGGACACGAGGGGGCTCCCGGACTGCGTCACGTGGTGCGGCGGCGCCAAGAAGTACCGGACGGGGCCATGGAACGGGCAGTGGTTCAGCGGCGTCCCGGAGATGGCGTCGTACGAATCCATCTTCTCGAGCCAGGTGGTGGTCACGCCCGACGAGATCGCCTACGTCTTCACCGCCGCCGCCGCCGCCGGCTCCCCCTTCTCCCGCCTCGTGCTGGACGAGGCCGGCGTGACCGAGCGCCTCGTGTGGGATCCCAGCAGCAAGGTGTGGATCCCGTACATGAAGGCACCGCGCGGCGTGTGCGACGACTACGCCAAGTGCGGCGCGTTCGGGCTGTGCAACGAGGACACCGCGTCGACGCTCTTCTGCAGCTGCATGGCGGGGTTCAGCCCGGTGTCCCCCTCGCGGTGGTCCATGAGGGATACCTCCGGTGGGTGCCGGAGGAACGCGCCGCTGGAGTGCGGCAACGGGAGCACCACGGACGGGTTCGTGACGGTGCGCGGCGTGAAGCTCCCCGACACGGACAACGCCACGGTGGACACGGGCGCCACGCTTGACGAGTGCAGGGCGAGGTGCTTGGCCAACTGTTCCTGCGTCGCCTACGCCGCCGCGGACATCAGCGGCCGCGGCTGCGTCATGTGGATCGGCGACATGGTTGATGTTCGTTATGTGGACAAAGGGCAGGACTTGCATGTGAGATTGGCAAAGTCTGAACTAGTCCTGTCAGGCAAACGTCATCAGAATAAGGTTGTCCAGAAGAGAGGGATTCTAGGATACTTGAGTGCATCAAATGAACTTGGAGATGAAAATTTAGAGCTCCCGTTTGTTAGTTTTGGAGAAATTGCTGCTGCCACAAACAATTTTTCTGACGACAACATGCTCGGACAAGGGGGCTTCGGGAAGGTTTACAAGGGAATGCTAGATGACGGCAAAGAAGTCGCAATTAAAAGGCTTAGCAAGGGTTCTGGCCAAGGAGCAGAAGAGTTCAGAAATGAAGTTGTTCTAATTGCCAAACTGCAGCATAGAAACCTCGTTAGACTTCTTGATCATGCAAATAAATATGTTCTTGATTGGCCAACAAGGTTCAAGATAATCAAAGGAGTAGCTAGAGGACTTCTTTATCTCCACCAAGATTCAAGGTTAACTGTAATTCATAGAGATCTCAAACCAAGCAATATCTTATTGGATGTTGATATGAGTCCTAAGATATCAGATTTTGGTATGGCAAGAATCTTTGGAGGCAACCAGCATGAAGCAATACTAACAGAGTTGTTGGAACATATCAAATCCGACACATATAGCTTTGGTGTTATACTCTTAGAGATTGTAAGTTGCTTGAAGATTAGCTTGCCTCGGCTGACGGACTTCCCCAATTTGTTAGCTTATGGCATGCTAGGCGGTAACAAAGAAGTGGCCATTAAAAGGCTTAGCAAGCATTCTGGACAAGGAGTAGAAGAGTTCAGAAATGAAGTGGTCCTTATTGCCAAATTGCAGCACAAAAATCTAGTCAGGCTTCTTGGTTGCTGCATTCACGGAGAGGAAAAGCTTCTCATATATGAATACTTGCCCAACAAAAGCTTGGATTACTTCCTTTTTGGACTGTTATGCGTTCAGGAAGACCCAAATGCTAGACCACTCATGTCATCAGTTGTGGCCATGCTCGAGAATGAAGCCACAACACTTCCTACTCCTAAGCAACCTGCATATTTTGTGCCAAGGAATTGCATGGCAGGAGGGGCAAGAGAGGATGCCAACAAGTCTGTGAACAGTATAAGTCTTACCACACTACAAGGACGTTAG</cdnaseq>

Protein Sequence

<aaseq>MEAATANIFHLSLTFFFMVLLTLGTSAAGVASDTLSNGRNLTDGNTLVSAGGSFTLGFFSLGLPSRRYLAIWFSESADAVWVANRDSPLNDTAGVLVNNGAGGLVLLDGSGRAAWSSNTTGKSSSATAAQLLESGNLVVRERDQLNTGVFIWQSFDHPSNTLIAGMRLGNNRQTGDAWFLSSWRAHDDPATGDCRRVLDTRGLPDCVTWCGGAKKYRTGPWNGQWFSGVPEMASYESIFSSQVVVTPDEIAYVFTAAAAAGSPFSRLVLDEAGVTERLVWDPSSKVWIPYMKAPRGVCDDYAKCGAFGLCNEDTASTLFCSCMAGFSPVSPSRWSMRDTSGGCRRNAPLECGNGSTTDGFVTVRGVKLPDTDNATVDTGATLDECRARCLANCSCVAYAAADISGRGCVMWIGDMVDVRYVDKGQDLHVRLAKSELVLSGKRHQNKVVQKRGILGYLSASNELGDENLELPFVSFGEIAAATNNFSDDNMLGQGGFGKVYKGMLDDGKEVAIKRLSKGSGQGAEEFRNEVVLIAKLQHRNLVRLLDHANKYVLDWPTRFKIIKGVARGLLYLHQDSRLTVIHRDLKPSNILLDVDMSPKISDFGMARIFGGNQHEAILTELLEHIKSDTYSFGVILLEIVSCLKISLPRLTDFPNLLAYGMLGGNKEVAIKRLSKHSGQGVEEFRNEVVLIAKLQHKNLVRLLGCCIHGEEKLLIYEYLPNKSLDYFLFGLLCVQEDPNARPLMSSVVAMLENEATTLPTPKQPAYFVPRNCMAGGAREDANKSVNSISLTTLQGR</aaseq>

Gene Sequence

<dnaseqindica>1..1309#1596..1789#2187..2319#2501..2737#2856..2959#3920..4130#4928..5130#ATGGAAGCAGCAACCGCCAACATTTTCCACCTTAGCCTCACCTTCTTCTTCATGGTCCTCCTTACTCTCGGAACATCTGCCGCCGGCGTTGCATCGGACACTCTGAGCAATGGCCGCAACCTCACTGACGGCAACACGCTCGTGTCGGCCGGTGGCTCCTTCACTCTGGGCTTCTTCTCACTCGGCTTGCCAAGCAGGAGATACCTCGCGATATGGTTCTCCGAGTCCGCGGACGCCGTCTGGGTGGCCAACCGTGACAGCCCACTGAACGACACCGCCGGCGTACTGGTTAACAATGGCGCGGGCGGGCTCGTCCTACTCGACGGCTCCGGCAGGGCCGCCTGGTCGTCGAACACGACTGGCAAGTCTTCATCAGCGACGGCGGCGCAGCTGCTGGAGTCCGGAAACCTCGTCGTGCGCGAGCGCGACCAGCTGAACACCGGTGTCTTCATCTGGCAGTCGTTCGATCACCCGTCGAACACACTGATCGCCGGCATGAGGCTCGGCAACAACCGGCAGACCGGCGACGCGTGGTTCCTCTCGTCGTGGCGCGCGCACGACGACCCGGCGACGGGAGACTGCCGCCGCGTGCTGGACACGAGGGGGCTCCCGGACTGCGTCACGTGGTGCGGCGGCGCCAAGAAGTACCGGACGGGGCCATGGAACGGGCAGTGGTTCAGCGGCGTCCCGGAGATGGCGTCGTACGAATCCATCTTCTCGAGCCAGGTGGTGGTCACGCCCGACGAGATCGCCTACGTCTTCACCGCCGCCGCCGCCGCCGGCTCCCCCTTCTCCCGCCTCGTGCTGGACGAGGCCGGCGTGACCGAGCGCCTCGTGTGGGATCCCAGCAGCAAGGTGTGGATCCCGTACATGAAGGCACCGCGCGGCGTGTGCGACGACTACGCCAAGTGCGGCGCGTTCGGGCTGTGCAACGAGGACACCGCGTCGACGCTCTTCTGCAGCTGCATGGCGGGGTTCAGCCCGGTGTCCCCCTCGCGGTGGTCCATGAGGGATACCTCCGGTGGGTGCCGGAGGAACGCGCCGCTGGAGTGCGGCAACGGGAGCACCACGGACGGGTTCGTGACGGTGCGCGGCGTGAAGCTCCCCGACACGGACAACGCCACGGTGGACACGGGCGCCACGCTTGACGAGTGCAGGGCGAGGTGCTTGGCCAACTGTTCCTGCGTCGCCTACGCCGCCGCGGACATCAGCGGCCGCGGCTGCGTCATGTGGATCGGCGACATGGTTGATGTTCGTTATGTGGACAAAGGGCAGGACTTGCATGTGAGATTGGCAAAGTCTGAACTAGGTACACATGACTATCACAAAATTGCACGCATGTGCATTCATTTGCCTGAAACTAATGGGTTCAGCAATTAATTACTTTATGGTTTTCTCGGTGAAAATTTTCTTCCCATTCAGTTAACAATAAGAAGAGGACTGTGGTAAAAATTATGCTCCCACTTACAGCAGCATGTTTGCTTCTGCTGATGAGCATATTCCTTGTATGGTTATACAAGTGCAGAGGTAATACTCGCAGCTTATATCCTCTACTCCTACTAGAGCTAATATTAACACACTATATATATTTGTAGTCCTGTCAGGCAAACGTCATCAGAATAAGGTTGTCCAGAAGAGAGGGATTCTAGGATACTTGAGTGCATCAAATGAACTTGGAGATGAAAATTTAGAGCTCCCGTTTGTTAGTTTTGGAGAAATTGCTGCTGCCACAAACAATTTTTCTGACGACAACATGCTCGGACAAGGGGGCTTCGGGAAGGTTTACAAGGTACAAAATAAGTTCTATCTTGAGAATTACAATAGGGACAAAAACTAACATATATAATACTATAATTTTTAACTAATAATATAGTTAATATAGGCTAAAACAACTAGAGATTGAAATTTTACCTAGGGTCTCGTGACCCCGTATAGTATGCTGTAGGAACTAGGAACTAGGAAGTAGCATGTCAAAAAAAAAAAAGGAACTAGGAAGTAGGAATGCCCCTGCACTGTACTGATAAATTAGCAGAGAGATTTTTACCATCCCAAATATGGAGGTACCTCAAATTAACATTAAGACTGTAGTACCTTTTCAGACTTCAGTCTTTAGGAACTGTAAAACCACTCATTTACAAATGAACAGCCTTCTTAATAAAAAAAAATAAAGTGATTAAATTATGCAGGGAATGCTAGATGACGGCAAAGAAGTCGCAATTAAAAGGCTTAGCAAGGGTTCTGGCCAAGGAGCAGAAGAGTTCAGAAATGAAGTTGTTCTAATTGCCAAACTGCAGCATAGAAACCTCGTTAGACTTCTTGGTTATTGTATATACGGAGATGAGAAGCTGCTAATTTACGAATACTTGCCAAACAAAAGCTTGGATGCTTTCATTTTTGGTACTGTTCAGATTTATATACCACAGTATTGCATAAACTTATCATATGATCCAAAGAAACTTGGCTGCATACTTAATAATAACATAGTTTACCATTCTTATAGATCATGCAAATAAATATGTTCTTGATTGGCCAACAAGGTTCAAGATAATCAAAGGAGTAGCTAGAGGACTTCTTTATCTCCACCAAGATTCAAGGTTAACTGTAATTCATAGAGATCTCAAACCAAGCAATATCTTATTGGATGTTGATATGAGTCCTAAGATATCAGATTTTGGTATGGCAAGAATCTTTGGAGGCAACCAGCATGAAGCAATACTAACAGAGTTGTTGGAACATAGTGAGTCATTCATGCATTAATGTTCACAATGTTTATTTGCTCGAATCTTTACTTACTGCTAAATCATTAAGCAGCGGTTACATGTCTCCTGAATATGCAATGGATGGCGCCTTTTCAGTCAAATCCGACACATATAGCTTTGGTGTTATACTCTTAGAGATTGTAAGTTGCTTGAAGATTAGCTTGCCTCGGCTGACGGACTTCCCCAATTTGTTAGCTTATGTAAGTATGGTGGAATGCTTTATCTCTACAATTCAGATTAATTGTACTAATTTTATATGGACTTGATTCCACTGTTTCAGGCATGGAACTTGTGGAAGAACGACAGGGCGATGGATTTGATGGACTCATCCATTTCTAAGAGTTGCTCACCAACTGAAGTTTTACTATGTATCCAAATAGGTCTATTGTGCGTGCAAGATAATCCAAATAATAGACCACTCATGTCTTCGGTTGTGTCCATGTTGGAGAACGAGACCACAACGCTTTCAGCTCCTATACAGCCTGTGTATTTTGCACATAGGGCCTTTGAAGGCAGACAAACAGGTGAAAATAGCATCAGCTTATTAGAGGGACGGTAGGTGTTTATGTTATTTTTCTGCACGCTAAGTGCTTCCTTTAGGAGCACATGGTGAAACATGTATAATTGATATTTGGAGAGGAGTAGGACCGTAACATATGTGGCATACAATTGCATTTTTGTGATGATAAAATTGATTATTTACCATCGATTTTGTTCCTCGGTACCCAAACTTTGAGCCATCGCACCGGAAACGAGTTAAGAAGACACACCCGTAACCCATTGATCTCGACTTGAAATCGGGTTCTTGTCAACATGGGCTTGGCGGCCTGGTGGGCATTAGCGGGCCGGATTTGTTCTGGCAGAATTGAACTAGATGACACAGGAACCATTCGAGGAAAGGGCTCTCATCCTTCATCCTCTTCCTCTCATCTCCTCACAGGACCAAGCTTGGCCTCCCTCCCATTGGAGGGAAGCCATGCCATGCTTATTGGATTTTGTTCCAACAAACTTGGTGTTAAATAATTGAGAAGAATGTATGATTGTGTTAAGAATCAAATATAGAACCTCAGGGGTGAAACCATACATCCATGATACTGTGTGAACAAGTGTATATCCCGATGAACTTTCTTAATAAAAATTAAAGTGATTAAATTGTGCAGGGCATGCTAGGCGGTAACAAAGAAGTGGCCATTAAAAGGCTTAGCAAGCATTCTGGACAAGGAGTAGAAGAGTTCAGAAATGAAGTGGTCCTTATTGCCAAATTGCAGCACAAAAATCTAGTCAGGCTTCTTGGTTGCTGCATTCACGGAGAGGAAAAGCTTCTCATATATGAATACTTGCCCAACAAAAGCTTGGATTACTTCCTTTTTGGTGTGTCCTAATCATATATTCCTTTTTTACCTTTTCTTTTTCCACGTTTGGTGGAAGACTGTTACCAAAAGGCCATGTGTGAACAACTATAAGTATCGTTTTATATTGTTCACGGTAGATGATTCAAAAAAGTCTATGCTTGACTGGCAAACACGGTTCAACATAATCAAAGGAGTAGCTAGAGGACTTGTTTATCTCCATCAAGATTCGAGGATGACAATAATTCACAGAGATCTCAAAGCGAGCAACATTTTATTGGATGAGGGGATGAGCCCCAAAATATCAGATTTTGGCATGACAAGGATCTTTGGTGGCAACCAGCATCAAGCAAACACTAGACATGTAGTCGGGACATAGTGAGTAACTATTGCACTACTTATGATTACAATACTAACTTTTATATACTTGGAAAACACTTAAATAACTTACACTCGTTGGTGACATGATTCATATAGTGGTTACATGTCTCCTGATATGCAATGGAAGGCATCTTCTCTGTCAAGTCTGACACCTACAGCTTTGGTGTTTTAGTTTTGGAACTTATAAGCGGCTCTAAGATAAGCTCTCCTCATCTTATAATGGGTTTTCCAAATCTTATAGCCTGTGTAAGTGTGTAAGTTCTAAGAAATATCAAAATGCATAAAGTTTCAATAGCTAGGATTTTGCACTAATTAGGAACTTTGTTCCCTTGGTTCAGGCATGGAGCTTGTGGAAGAATGGAAAGGCAGAGGATCTCGTGGACTCAATTATTCTGCAGATATATTCACTTAATGAGTTTTTGCTCTGTATCCATGTAGGACTGTTATGCGTTCAGGAAGACCCAAATGCTAGACCACTCATGTCATCAGTTGTGGCCATGCTCGAGAATGAAGCCACAACACTTCCTACTCCTAAGCAACCTGCATATTTTGTGCCAAGGAATTGCATGGCAGGAGGGGCAAGAGAGGATGCCAACAAGTCTGTGAACAGTATAAGTCTTACCACACTACAAGGACGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014289