BGIOSGA014292

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Revision as of 03:56, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014292| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014292, complete gene.| tag = OsI_175...")
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Gene Name

BGIOSGA014292

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014292, complete gene.

LocusTag

OsI_17554

Ensembl Transcript ID

BGIOSGA014292-TA

Ensembl Protein ID

BGIOSGA014292-PA

Length

4322

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31142532..31146853

Sequence Coding Region

31146762..31146853,31145164..31145796,31144390..31144976,31143951..31144123,31143628..31143838
,31143176..31143413,31142927..31143080,31142532..31142831

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31142532..31146853 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31142532..31146853 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTGCTGCCGGCGTGGAAGTGGCAAGGGCCAAGGGGAACCAGCTTGGCGTCAATGGCTTGTGACCGCGTAAGGGGACGGGACAGTAGCAGTTTCTGCCAATCCGATGACCGCCTAACACCGGCAAAGCCACTCATCTTCCCCGGCGGCGACAAGCTCATCTCGGATGGCGGCGTCTTTGCTCTCGGCTTCTTCTCCCTGACCACCACCAACTCAACCCCAAGCCTGCTCTACCTTGGCATATGGTACAACAACATCCCGGAGCGCACCTATGTCTGGGTCGCCAACCGCGACAACCCAATCACCACCCATACGGCGAGGCTGGCTGTTACCAACACCTCCGGGCTTGTGCTATCCGACTCCAAGGGCCGCACTATCTGGACCACGGCGAACACGGTCACCATCGGAGGTGGTGGAGCCACCGCGGTGCTGCAGAACACGGGCAACTTCGTGCTCCGGTTGCCGGTGGACGGCACAGAGGTATGGCAGAGCATCGATCACCCCACGGACACGATCCTCCCTGGCTTCAAGCTATGGACGAACTACAAGAACCATGAGGCGGTGCGCGTAGTTGCTTGGAGGGGTCCTCGCGACCCGTCCACCGGCGAGTTCTCCCTCAGCGGTGACCCTGACCAGTGGGGGCTCCAGATCGTCATCTGGCATGGGGCGAGCCCGTCGTGGCGCAGCGGTGTCTGGAACGGCGCGACGGCCACCGGCCTCACCAGGTACATATGGTCCCAGATCGTTGACAATGGCGAGGAGATCTACGCGATATACAACGCAGTTGATGGCATTTTGACACACTGGAAGCTGGACTACACCGGGAACGTGAGCTTCCGGGCATGGAACAACGTATCATCGACTTGGACGAGCCCATTCGAGCGACCAGGCCATGGCTGTCTCCACTACGGCGCCTGCGGGCCGTTCGGCTACTGCGACATCACCGGCAGCTTCCAGGAGTGCAAGTGCCTTGATGGCTTCGAGCCGGCCGATGGATTTAGCCTCAACTCTTCCAGAGGATGCCGAAGAAAGGAGGAGCTGAGATGCGGTGGCCAAGACCATTTCTTCACCTTACCAGGGATGAAGGTGCCGGACAAGTTCTTGTACATCAGGAACAGAACCTTTGAGGAGTGTGCCGATGAGTGCGACCGCAACTGCTCGTGCACGGCATACGCTTATGCCAACTTGAGAACTATCCTCACGACGGGTGACCCCTCAAGGTGCTTGGTATGGATGGGGGAGCTTCTCGACTCGGAGAAAGCCGGTGCCGTTGGTGAGAACCTGTACCTTCGACTCGCCGGCTCTCCTGCAGGCATACGACGAAACAAGGAAGTACTTAAAAAAACGGAGCTAGGATACTTGAGTGCTTTTCATGACTCATGGGATCAAAATCTAGAGTTCCCTGATATTAGCTATGAAGACCTCACCTCTGCAACAAACGGTTTCCATGAAACTAACATGCTTGGAAAAGGTGGTTTTGGCAAAGGAACATTGGAAGATGGCATGGAAGTTGCTGTTAAAAGGCTTAACAAGGATTCTGAGCAAGGGGTAGAGCAATTTAGGAATGAAGTAGTTCTTATTGCAAAACTGCAGCATAAGAACCTAGTTAGACTTCTTGGTTGTTGCATTCATGGAGATGAGAAGTTGCTTATTTATGAATACTTACCCAACAAAAGCTTAGACAAATTCCTCTTTGATCACGCAATGAAGTCTGTGATTGATTGGCAAACAAGGTTTAACATAATCAAAGGGGTAGCTAGAGGACTTCTTTATCTCCATCAAGATTCAAGAATGATGATAATTCATAGAGATCTCAAGACAAGCAACATCTTGTTGGATGCAGAGATGAACCCAAAAATATCAGATTTTGGTATGGCAAGGATTTTTGGAAACAGTGAACAGCAAGTAAGTACTAGACGAGTCGTTGGGACCTACGGCTACATGGCACCTGAATATGCAATGGAAGGCATTTTTTCAGTCAAATCTGACACCTATAGCTTTGGCGTATTGCTACTGGAGATTGTAAGTGGATTAAAGATCAGCTCCCCTCATCATATTGTGATGGATTTTCCGAACCTTATAGCTTATGCATGGAACTTGTGGAAAGATGGAATGGCAGAGGCTTTCGTAGACAAAATGGTTCTGGAGAGCTGTTTGCTTAATGAAGTATTGCAATGCATCCATATTGGACTATTGTGTGTTCAGGACAGCCCAAATGCCAGGCCGCATATGTCATTAGTTGTGTCGATGCTGGACAACGAGGACATGGCACGCCCAATACCGAAGCAGCCTATATATTTCGTGCAAAGGCATTACGACGAAGAAGAAAGACAAGGCTCGGAAAGTTCCGTTAATAACGCGAGCCTGACAGCGCTAGAAGGCCGCTAG</cdnaseq>

Protein Sequence

<aaseq>MLLPAWKWQGPRGTSLASMACDRVRGRDSSSFCQSDDRLTPAKPLIFPGGDKLISDGGVFALGFFSLTTTNSTPSLLYLGIWYNNIPERTYVWVANRDNPITTHTARLAVTNTSGLVLSDSKGRTIWTTANTVTIGGGGATAVLQNTGNFVLRLPVDGTEVWQSIDHPTDTILPGFKLWTNYKNHEAVRVVAWRGPRDPSTGEFSLSGDPDQWGLQIVIWHGASPSWRSGVWNGATATGLTRYIWSQIVDNGEEIYAIYNAVDGILTHWKLDYTGNVSFRAWNNVSSTWTSPFERPGHGCLHYGACGPFGYCDITGSFQECKCLDGFEPADGFSLNSSRGCRRKEELRCGGQDHFFTLPGMKVPDKFLYIRNRTFEECADECDRNCSCTAYAYANLRTILTTGDPSRCLVWMGELLDSEKAGAVGENLYLRLAGSPAGIRRNKEVLKKTELGYLSAFHDSWDQNLEFPDISYEDLTSATNGFHETNMLGKGGFGKGTLEDGMEVAVKRLNKDSEQGVEQFRNEVVLIAKLQHKNLVRLLGCCIHGDEKLLIYEYLPNKSLDKFLFDHAMKSVIDWQTRFNIIKGVARGLLYLHQDSRMMIIHRDLKTSNILLDAEMNPKISDFGMARIFGNSEQQVSTRRVVGTYGYMAPEYAMEGIFSVKSDTYSFGVLLLEIVSGLKISSPHHIVMDFPNLIAYAWNLWKDGMAEAFVDKMVLESCLLNEVLQCIHIGLLCVQDSPNARPHMSLVVSMLDNEDMARPIPKQPIYFVQRHYDEEERQGSESSVNNASLTALEGR</aaseq>

Gene Sequence

<dnaseqindica>1..92#1058..1690#1878..2464#2731..2903#3016..3226#3441..3678#3774..3927#4023..4322#ATGTTGCTGCCGGCGTGGAAGTGGCAAGGGCCAAGGGGAACCAGCTTGGCGTCAATGGCTTGTGACCGCGTAAGGGGACGGGACAGTAGCAGGTTAGGCCCGCCGTCTCTTCCGCCTAAGCCGGCTGCGGTGGCGGTGGCGCCGGCACCTGCCCCGACGGCCGCCGCTACTCCGCCGTCCACCGCCTCAACCGAGCGCTTCCTCTCCTAGGCTGCAACGCCTCCGCCACCTCGCCGAGCTCCACCGGGAGCGGCAGACCGCGGACGCCGGGCGCTTCGACGTGCGGTGCCGACCGTCGCCGGCTCACCGCCCCCCACCGCCGCCAACCACCACTCCGCCGGCGAAGTAACCGAAGCACGTTCGTCTTCGTCCACAGATCAATCGACCTAGGCCCAATAGCCCATCACGAGCACTTTCACGGCCCACGAATCTCACAGTTCCGGTCGCGGACTGGTGGGCCGAATTTGTTCTGGTATTCCCTCGCCGCGGCCCATGCCAATGCCTCTCCGCCGCTGCCCGGTGAAGCACCTCCACCGTCTCACTCTCATCACTGGCTCGGAAGTCAGGACGCTGGGAAGAATCACCGGGAAATATTTGTGGAGATGCACAGCAAAACACTTGCCTGTAAATCTGTGATTAGTTGTGCTGGTAAAATAGCTTGCCTGCCGTACTGCCGTTGCAAGTGGTTCTCCTGAAGACTAGCAAATGCCCTGTGCGTGCTGACTTGCTTCATCAAGCACTGAAAATAAAAGTCATTGAGCAATAAATCGGGTCTTCAATCTTAACGGTGACATACAACTACTAGCGTGTCGTTCTGATCATCTGGCCACTCTCAACACAGGAATCCAGAATATCTCTTGCAATATATACTATAGGGTAGCTGCACTAGTTACTCTATGCTGCCGTCAAGAAGGTTGCCCAATAATCTCACAACGTACTCTCTGTTCTATCGTCTCTATGTAGGATTATTATGCTCTTCATTCTTCCAAGGAATTTACAGAAGAGAATATGACCACAATGCATGTGGTCAATTGGTCATCTTCATGTTCTTGATTAGTTTCTGCCAATCCGATGACCGCCTAACACCGGCAAAGCCACTCATCTTCCCCGGCGGCGACAAGCTCATCTCGGATGGCGGCGTCTTTGCTCTCGGCTTCTTCTCCCTGACCACCACCAACTCAACCCCAAGCCTGCTCTACCTTGGCATATGGTACAACAACATCCCGGAGCGCACCTATGTCTGGGTCGCCAACCGCGACAACCCAATCACCACCCATACGGCGAGGCTGGCTGTTACCAACACCTCCGGGCTTGTGCTATCCGACTCCAAGGGCCGCACTATCTGGACCACGGCGAACACGGTCACCATCGGAGGTGGTGGAGCCACCGCGGTGCTGCAGAACACGGGCAACTTCGTGCTCCGGTTGCCGGTGGACGGCACAGAGGTATGGCAGAGCATCGATCACCCCACGGACACGATCCTCCCTGGCTTCAAGCTATGGACGAACTACAAGAACCATGAGGCGGTGCGCGTAGTTGCTTGGAGGGGTCCTCGCGACCCGTCCACCGGCGAGTTCTCCCTCAGCGGTGACCCTGACCAGTGGGGGCTCCAGATCGTCATCTGGCATGGGGCGAGCCCGTCGTGGCGCAGCGGTGTCTGGAACGGCGCGACGGCCACCGGCCTCACCAGGTACCAGTGGCGGATCCACCATGGGATCTGTGGGGGTCTTGAGACCCCGCTACCCGTATTGTAATCATGGGAGACCCCATAAAAACCCTACTAAAATTTTGTCATACATCTATTAGAAGAGGGGACTATAATTTTGTATAGTTTGTTTAGACCCTCCTGTTAATTTTTTCTGATCCGCCCCTGCCAGGTACATATGGTCCCAGATCGTTGACAATGGCGAGGAGATCTACGCGATATACAACGCAGTTGATGGCATTTTGACACACTGGAAGCTGGACTACACCGGGAACGTGAGCTTCCGGGCATGGAACAACGTATCATCGACTTGGACGAGCCCATTCGAGCGACCAGGCCATGGCTGTCTCCACTACGGCGCCTGCGGGCCGTTCGGCTACTGCGACATCACCGGCAGCTTCCAGGAGTGCAAGTGCCTTGATGGCTTCGAGCCGGCCGATGGATTTAGCCTCAACTCTTCCAGAGGATGCCGAAGAAAGGAGGAGCTGAGATGCGGTGGCCAAGACCATTTCTTCACCTTACCAGGGATGAAGGTGCCGGACAAGTTCTTGTACATCAGGAACAGAACCTTTGAGGAGTGTGCCGATGAGTGCGACCGCAACTGCTCGTGCACGGCATACGCTTATGCCAACTTGAGAACTATCCTCACGACGGGTGACCCCTCAAGGTGCTTGGTATGGATGGGGGAGCTTCTCGACTCGGAGAAAGCCGGTGCCGTTGGTGAGAACCTGTACCTTCGACTCGCCGGCTCTCCTGCAGGTATGCGCCGTCTCATGATGTTTTCTCTAGCAATTGCCCCACATTCTCCATGAACATGACGANTAATGTCATTCTGCAGTAAACAACAAGAACATTGTAAAGATTGTACTCCCAGCTATAGCATGCCTGCTGATACTGACAGCATGCTCATGCGTTGTACTCTGTAAATGCGAGTCAAGAGGTAAAGCAAGAGATAACAGCTACTTGCAATATGCAGCTGCTAAATGTAATATTGTTGTGTTGACATGTTTTGATATTTATATTAGGCATACGACGAAACAAGGAAGTACTTAAAAAAACGGAGCTAGGATACTTGAGTGCTTTTCATGACTCATGGGATCAAAATCTAGAGTTCCCTGATATTAGCTATGAAGACCTCACCTCTGCAACAAACGGTTTCCATGAAACTAACATGCTTGGAAAAGGTGGTTTTGGCAAAGTATATAAGGTGGTATAAAATTTTACCTTGTAAATTACACAATGTGAGTGTAGCATTCATGTCACTTTATTCTTGTTTAACACCATGTCTCCATGGTAATGAAATACCACAGGGAACATTGGAAGATGGCATGGAAGTTGCTGTTAAAAGGCTTAACAAGGATTCTGAGCAAGGGGTAGAGCAATTTAGGAATGAAGTAGTTCTTATTGCAAAACTGCAGCATAAGAACCTAGTTAGACTTCTTGGTTGTTGCATTCATGGAGATGAGAAGTTGCTTATTTATGAATACTTACCCAACAAAAGCTTAGACAAATTCCTCTTTGGTAAGTTTTATCAGATATTAAATGAAAAGCTTGTTTTTCAGAAAAGGATGCATTAAAAAAAAGTCTTGATTTTTTTTTTTTGGAATGTTCACCGGAGGGGAGAGGTTCCCCACCTGAATTTCCATTAAGACAAAGTGCATACTCTAATGGAGGAGTCAACATTATCGAATTCTCTAATGGTTTCATTCCTGTCCATTATCCATTTTCTTGGTAGATCACGCAATGAAGTCTGTGATTGATTGGCAAACAAGGTTTAACATAATCAAAGGGGTAGCTAGAGGACTTCTTTATCTCCATCAAGATTCAAGAATGATGATAATTCATAGAGATCTCAAGACAAGCAACATCTTGTTGGATGCAGAGATGAACCCAAAAATATCAGATTTTGGTATGGCAAGGATTTTTGGAAACAGTGAACAGCAAGTAAGTACTAGACGAGTCGTTGGGACCTAGTAAGTGGACTTGTTCTCTAGCCGACTAGTTCAACATATTCATGTGCTTGAACTTATTCACTTTTTTCCTGCTTGCTTGCAAATGATTTAAATAGCGGCTACATGGCACCTGAATATGCAATGGAAGGCATTTTTTCAGTCAAATCTGACACCTATAGCTTTGGCGTATTGCTACTGGAGATTGTAAGTGGATTAAAGATCAGCTCCCCTCATCATATTGTGATGGATTTTCCGAACCTTATAGCTTATGTAAGTGCATGCTGCTACCAATACTTGTGTTAACAATTCGAACACAATATAGTTAAAACAAGTTAAGAAATCTTTACTAATGTTATTACTTTCAGGCATGGAACTTGTGGAAAGATGGAATGGCAGAGGCTTTCGTAGACAAAATGGTTCTGGAGAGCTGTTTGCTTAATGAAGTATTGCAATGCATCCATATTGGACTATTGTGTGTTCAGGACAGCCCAAATGCCAGGCCGCATATGTCATTAGTTGTGTCGATGCTGGACAACGAGGACATGGCACGCCCAATACCGAAGCAGCCTATATATTTCGTGCAAAGGCATTACGACGAAGAAGAAAGACAAGGCTCGGAAAGTTCCGTTAATAACGCGAGCCTGACAGCGCTAGAAGGCCGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014292