BGIOSGA014304

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Revision as of 03:56, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014304| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014304, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA014304

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014304, complete gene.

LocusTag

OSIGBA0117N13.5

Ensembl Transcript ID

BGIOSGA014304-TA

Ensembl Protein ID

BGIOSGA014304-PA

Length

5773

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30932086..30937858

Sequence Coding Region

30937772..30937858,30936385..30936659,30935677..30935794,30934872..30935060,30934320..30934778
,30934086..30934187,30933741..30933941,30933451..30933625,30933042..30933313
,30932571..30932666,30932086..30932466

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30932086..30937858 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30932086..30937858 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGATCCCGGCGAGGCATATGCCGTCGATGATCGGCCGGAACGGCGCAGCGTACGGATCCTCATCGGCACTGTCACTCAGCCAGCCAAACTTGCTGGATAATCACCAGTTCCAGCAAGCGTTCCAGCATCAGCAGCAGCAGCATCATCTCCTTGACCAGATCCCGGCGACGACGGCGGAGAGCGGCGACAACATGATCCGCAGCCGTGCGTCCGACCCTCTCGGCGGCGACGAGTTCGAGAGCAAGTCCGGCAGCGAGAACGTCGACGGCGTCTCCGTCGACGACCAGGACCCCAACCAGCGGCCGCGCAAGAAGCGCTACCACCGCCACACCCAGCATCAGATCCAGGAGATGGAAGCATTCTTCAAGGAATGTCCACACCCAGATGATAAGCAGCGCAAGGAGCTGAGCCGGGAGCTCGGCCTGGAGCCTCTCCAAGTGAAGTTCTGGTTCCAGAACAAGCGCACCCAAATGAAGAACCAGCATGAGAGGCACGAGAACTCGCAGCTGCGGTCGGATAACGAGAAGCTCCGGGCCGAGAACATGCGGTACAAGGAGGCCCTGAGCAGCGCCTCCTGCCCCAACTGCGGCGGCCCCGCCGCCCTCGGCGAGATGTCCTTCGACGAGCACCACCTCCGCATCGAGAACGCCCGCCTCCGCGAAGAGATCGATAGGATATCGGCGATCGCGGCGAAGTACGTGGGGAAGCCAATGGTGCCGTTCCCGGTGCTGTCGAACCCGATGGCGGCGGCGGCGTCGCGGGCGCCGCTGGACCTCCCCGTGGCGCCGTACGGCGTGCCGGGCGACATGTTCGGCGGCGGTGGCGCCGGGGAGCTGCTGCGCGGGGTGCAGTCGGAGGTCGACAAGCCGATGATCGTGGATCTCGCCGTGGCGGCGATGGAGGAGCTGGTCCGCATGGCGCAGCTGGACGAGCCGCTCTGGAGCGTCGCGCCGCCGCTCGACGCCGCGGCGGCGGCGATGGAGACGCTCAGCGAGGAGGAGTACGCGCGCATGTTCCCCCGAGGGCTCGGCCCCAAGCAGTACGGGCTCAGGTCGGAGGCGTCCCGCGACAGCGCCGTCGTCATCATGACGCACGCCAACCTCGTCGAGATCCTCATGGACGCGAATCAGTACGCGGCAGTGTTCTCGAACATCGTGTCGAGGGCCGTCACGCTGGAGGTGCTGTCCACCGGCGTCGCGGGGAACTACAACGGTGCATTGCAAGTGATGTCAGTGGAGTTTCAGGTGCCATCGCCACTGGTGCCAACGAGAGAGAGCTACTTCGTGAGATACTGCAAGCAGAACGCAGACGGGACATGGGCCGTCGTCGACGTCTCGCTGGACAGCCTCCGCCCTAGCCCCGTCCTCAAATGTCGCCGCCGTCCGTCAGGCTGCCTCATCCAAGAAATGCCCAATGGCTACTCCAAGGTGACGTGGGTGGAGCATGTGGAGGTGGACGACAGGTCGGTGCACAACATCTACAAGCTGCTGGTGAACTCCGGGCTGGCGTTCGGCGCGCGGCGGTGGGTCGGCACGCTGGACCGCCAGTGCGAGCGCCTCGCCAGCGTCATGGCCAGCAACATCCCCACCAGCGACATCGGCGTGATTACGAGCTCGGAGGGGAGGAAGAGCATGCTGAAGCTGGCGGAGAGGATGGTGGTGAGCTTCTGCGGCGGCGTGACGGCGTCGGTGGCGCACCAGTGGACGACGCTGTCCGGCAGCGGCGCCGAGGACGTCCGCGTCATGACGAGGAAGAGCGTCGACGACCCCGGGAGGCCCCCCGGAATCGTCCTCAACGCCGCCACCTCCTTCTGGCTCCCCGTCCCTCCCAAGCGCGTCTTCGACTTCCTCCGCGACGAATCCTCTCGCAGTGAGTGGGACATCCTCTCCAATGGCGGTATCGTTCAAGAAATGGCCCACATCGCCAATGGCCGGGATCAGGGCAACTGCGTCTCACTTCTTCGCGTCAACAGCTCGAACTCGAACCAGAGCAACATGCTGATCCTGCAGGAGAGCTGCACGGACGCGTCGGGGTCGTACGTCATCTACGCGCCGGTGGACGTGGTTGCGATGAACGTCGTGCTAAACGGCGGCGACCCGGACTACGTCGCGCTGCTGCCGTCGGGCTTCGCCATCCTGCCCGATGGGCCGGCGCACGACGGTGGCGACGGCGACGGCGGCGTCGGCGTCGGCTCCGGCGGGTCGCTGCTGACGGTGGCGTTCCAGATACTGGTGGACTCCGTCCCGACGGCGAAGCTCTCGCTGGGGTCGGTGGCGACGGTGAACAGCCTCATCGCCTGCACGGTGGAGCGCATCAAGGCGGCCGTCTCCGGCGAGAGCAATCCGCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MMIPARHMPSMIGRNGAAYGSSSALSLSQPNLLDNHQFQQAFQHQQQQHHLLDQIPATTAESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMVPFPVLSNPMAAAASRAPLDLPVAPYGVPGDMFGGGGAGELLRGVQSEVDKPMIVDLAVAAMEELVRMAQLDEPLWSVAPPLDAAAAAMETLSEEEYARMFPRGLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAVTLEVLSTGVAGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLRVNSSNSNQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGESNPQ</aaseq>

Gene Sequence

<dnaseqindica>1..87#1200..1474#2065..2182#2799..2987#3081..3539#3672..3773#3918..4118#4234..4408#4546..4817#5193..5288#5393..5773#ATGATGATCCCGGCGAGGCATATGCCGTCGATGATCGGCCGGAACGGCGCAGCGTACGGATCCTCATCGGCACTGTCACTCAGCCAGGTAAAGAATTTCTTTTGTCAGGAATTTGAGCTGAAAAGAAATTAATTTCAAGGGGTGGCCTGCTTTCCTTTTATTTTCTTGAAAAATCCAAAGACTTTTGAGCGTTTTGCTGTGCTAGATTTTTACCTTTTGCGTCTTCTTTCTCTTTCTTGTGTTTGATTAATTTGAGGTGTTACTACTTGAGATGAAAAGCTAGAAGAGGGGAAAAAAAGCAATACATTCAGTTCTGAAGTTTCTGAAGATAATTAGTCACACTTTCTTGGAAAATGAGAAGTTTCAGGGTTGTGGAGAGAGAGAGAAGGGGGGCTATATAGAGGGGAGAGAAAGAGGTTATCTCCAGTACTTAGTGGTTGCTGTTCACACATATTAGGTCATAAGATTCAGAGTACATGAGAGCCTCCCTTTCTTTAAGACTGGCCTACTCCTCTCCCTACTCCTATATAAGGGGAGCAGATGAACAGGTCAGCTGATAGATAGATAGATAGGACTATGGAGAGGAGGGAGATTTTCCAAGTTGCTGATCTTGCACACATATTGAGAGGGAAACCTGTAGATCATCTTCAACAGGTTTGTTGTTGCTTGCTTCCTTGTTCTTCCAAGCTTTTTGGGTCTTTGTGTTGTGGCACTCTTGAAGAAGAAACATATCGATCTAGCTACCCTTTCTTTCTTATTCCTCTTTGCAAGCTTGCTTTCACATCTTCTGCATATACCAAAGGGAATCAAAAAAGGAGAAAAGTTTCTTCACTTAGCTTGTCTCCTCATCCCTTCCTGATTTAAAGCAATCTTCCATTTTATCCCCAAATTTTTTTCTGTGTTTTTATGAAGTATGAACACACCAGATTTTTCCTTGCAGAAATGAGAAAGTTATCAATATGGGTTGTTTTTGTTCATGCATACAATTTTTTCTTCTATCTTTTCCACAAAACTTTGAACTTCTCCACTTTGTCTAGTATCTATTTAATGCATATGCCATGTATAAAACGCACGGAATAAATAGGTACTACTACTGTAAAGGCGTAATCTGTGGTACCAAATTGGTAGCTAAGTTTTGCTCTTTATGTAGCACACGCATACTAATCCTCAATTAATTCGATCTGCTCCAAAATTCGCAGCCAAACTTGCTGGATAATCACCAGTTCCAGCAAGCGTTCCAGCATCAGCAGCAGCAGCATCATCTCCTTGACCAGATCCCGGCGACGACGGCGGAGAGCGGCGACAACATGATCCGCAGCCGTGCGTCCGACCCTCTCGGCGGCGACGAGTTCGAGAGCAAGTCCGGCAGCGAGAACGTCGACGGCGTCTCCGTCGACGACCAGGACCCCAACCAGCGGCCGCGCAAGAAGCGCTACCACCGCCACACCCAGCATCAGATCCAGGAGATGGAAGCGTAATAACACTCAACTCATAGCTATTTACTTAATTAATTATGTGTTCTTGATTCCATATAGTATATACTTTGTTTGATTGTCCTAGAAATGTGACATATTTGAGTTCAGTTCAGTTTTGCCCCAGCTAGCTTGTTTTTGGAATGTTATTGATGGGTGTTCTAATTCAGAAAATTACGCATGAAATGCTGTGTTAGTCTACTGAAATCAATGTGAGGAGATGAGTACAAATGGAACAGCTGGTTAATTATACTGTCTTTAATTAATTTCCCATGGACTGATGTAAGCTTGCGTAGAAGTCAAATTGATTTCTCTTGCCCGTCCATTTCCCCTGGACGAACCGCATAAAGTTGACTCGTTGATCAAAACCGTTTTTGTTCTTTTGCACTCTCCCCCAAACAAAACGGAAGACGAAGCATTCAAGAACGTAGTACGAATTTTGCGTTCACACGTTCAACCGAACTTCAAAAATTTCCCCTTCTAATTTATTTTTCCTGGATGCATTAATTCGTACGTACTATTAACTTACTGATGACTAATAGAATTAAATTAATCTCGGTTCATCTGTTCTAAATCTATCTGATCTGATCAGATTCTTCAAGGAATGTCCACACCCAGATGATAAGCAGCGCAAGGAGCTGAGCCGGGAGCTCGGCCTGGAGCCTCTCCAAGTGAAGTTCTGGTTCCAGAACAAGCGCACCCAAATGAAGGTGAAAAAACCTAATTAATCACCCAAATAGTTGTTGATTCTGCTCATCATTTTCACCTTTCTTTCACCTGTGTTCGTAGCAGTACAATTCTTTTTTTTAGGAAACACATGTACGTGTAATTAATCAGGACGTTGCAACCTGCAAGCGAGTGCAAATGCAACGGATTCTTTGGATTTCTGGTTGAGAAAATTTCGGCCGGAAAGAAGGCGAGCTTGCGAGATAGAGAGAAGAGAGAGAGCGTCGTCTTCTTCTTCCTCCTCGTCGTCGTCACAACCACTTCATTTAAGCCTCTGACCTAGCTCCTGCAGGACGCATTCATGGCGTATTACTATAACTGGACAAGGCTTGCCCACGCACCCCCATGTCCGCTTCTGCATTGCACACTGCCAAATGTGGCAGTTGCAGGCCTACGCCTCCGTCCGTCCTCCATAGTCAAACCCTTCCCCTACCTTGCTGACCTAGCTGCATACGTGTACAGTGATTGGAATTAACAGTTTGCACGAACGAACACACTGTCAATAGTGTCATCGTCAATCCGTTGCAAAGATTTTCGAAGTTTTTAGCTTGAAATTTGAGTAAAAATGGTGTGTGATTTGATGTGTTGGGGAGAGTGCAGAACCAGCATGAGAGGCACGAGAACTCGCAGCTGCGGTCGGATAACGAGAAGCTCCGGGCCGAGAACATGCGGTACAAGGAGGCCCTGAGCAGCGCCTCCTGCCCCAACTGCGGCGGCCCCGCCGCCCTCGGCGAGATGTCCTTCGACGAGCACCACCTCCGCATCGAGAACGCCCGCCTCCGCGAAGAGGTAGTTTTCACCATATCTGAACAATCGATCGATCATGGTGACACCGCCATTGCATGGATCGTCGCACGCTGATCGTGTCGTTGTGCTTGTCAGATCGATAGGATATCGGCGATCGCGGCGAAGTACGTGGGGAAGCCAATGGTGCCGTTCCCGGTGCTGTCGAACCCGATGGCGGCGGCGGCGTCGCGGGCGCCGCTGGACCTCCCCGTGGCGCCGTACGGCGTGCCGGGCGACATGTTCGGCGGCGGTGGCGCCGGGGAGCTGCTGCGCGGGGTGCAGTCGGAGGTCGACAAGCCGATGATCGTGGATCTCGCCGTGGCGGCGATGGAGGAGCTGGTCCGCATGGCGCAGCTGGACGAGCCGCTCTGGAGCGTCGCGCCGCCGCTCGACGCCGCGGCGGCGGCGATGGAGACGCTCAGCGAGGAGGAGTACGCGCGCATGTTCCCCCGAGGGCTCGGCCCCAAGCAGTACGGGCTCAGGTCGGAGGCGTCCCGCGACAGCGCCGTCGTCATCATGACGCACGCCAACCTCGTCGAGATCCTCATGGACGCGGTAAGCTCTTGGTTAATTTTCTGTCAGTCAGTGCGCTATTCTTGTCTGAATGTTTTTTAGTTTGGTGATTTTTATGATCCTGTTTGATTGTTGGGGTCTGAATTTCGTTCAAATTTTGAGTGAATTGCGCAGAATCAGTACGCGGCAGTGTTCTCGAACATCGTGTCGAGGGCCGTCACGCTGGAGGTGCTGTCCACCGGCGTCGCGGGGAACTACAACGGTGCATTGCAAGTGGTATGTGTTCATGCTTGTCTTAAAAATTTTGTCTCCTTTCTGAATCTTCTGTCATATTCAGTAGTACCAAAGAATTCGAAGTGTGTACATGTTGGTCACTGAAATGGGACAAAATTGTGTTGGTTTTGGCCGTTTTCTCTGCAGATGTCAGTGGAGTTTCAGGTGCCATCGCCACTGGTGCCAACGAGAGAGAGCTACTTCGTGAGATACTGCAAGCAGAACGCAGACGGGACATGGGCCGTCGTCGACGTCTCGCTGGACAGCCTCCGCCCTAGCCCCGTCCTCAAATGTCGCCGCCGTCCGTCAGGCTGCCTCATCCAAGAAATGCCCAATGGCTACTCCAAGGTGACCATCATCAGCTCATCATCATCATCATCACAAATCAAATCTGAAAGTCTGAATTCAAGATATATTGCTGTTCAGAAATCATGGAAAACTGATGAAATTGTTGTATGATCAGGTGACGTGGGTGGAGCATGTGGAGGTGGACGACAGGTCGGTGCACAACATCTACAAGCTGCTGGTGAACTCCGGGCTGGCGTTCGGCGCGCGGCGGTGGGTCGGCACGCTGGACCGCCAGTGCGAGCGCCTCGCCAGCGTCATGGCCAGCAACATCCCCACCAGCGACATCGGCGGTAAGTAATTGATCGAGCATGCAGCGAATTTCACCCTTTAATTTGATCCAAAACGAAATTAAAATTCAGATATGTTCAATCACTAAACCACGCAGTGGATTTAATTGTGTTTGTTGAATGAATGAATATAATTGCAGTGATTACGAGCTCGGAGGGGAGGAAGAGCATGCTGAAGCTGGCGGAGAGGATGGTGGTGAGCTTCTGCGGCGGCGTGACGGCGTCGGTGGCGCACCAGTGGACGACGCTGTCCGGCAGCGGCGCCGAGGACGTCCGCGTCATGACGAGGAAGAGCGTCGACGACCCCGGGAGGCCCCCCGGAATCGTCCTCAACGCCGCCACCTCCTTCTGGCTCCCCGTCCCTCCCAAGCGCGTCTTCGACTTCCTCCGCGACGAATCCTCTCGCAGTGAGGTACTCCCTCTGTTTTATATCATAAGTTGCTTTTACGTCAAAAAAAGAAAAAATAAGTCGCTTTGTTTTTTATTCAGATGAATTTTGCAAAAAAAACATAGTAGCGCTTTTAATACAAAGCAAACACATTTTATCACAATATATTCAATATTAAATTTAATAAAACTAATTTAATGTTTTATATGCTATTAATTTTTTTAAAATTTTATTTAACTTAATAAAGTTTGACTAGGAAAGAAGTCAATACGACTTATAATATTAAACGGATAGAATACCTATAAATCCATGATAAGGTTAACAAGAATACAATTACAAACTCTTAGTTCGCGAAAAAAATTACAAAATCTTAAACTTTGAAAATAAATTTATTTTCAGTGGGACATCCTCTCCAATGGCGGTATCGTTCAAGAAATGGCCCACATCGCCAATGGCCGGGATCAGGGCAACTGCGTCTCACTTCTTCGCGTCAACGTAAGCAGCAATTCATCCAAGATCAAAACGCAAGATATATACGAGCATGCGATAATGCGCGATGTATTGATCGATCCCGTTTCATGTACAAATATATATTGCAGAGCTCGAACTCGAACCAGAGCAACATGCTGATCCTGCAGGAGAGCTGCACGGACGCGTCGGGGTCGTACGTCATCTACGCGCCGGTGGACGTGGTTGCGATGAACGTCGTGCTAAACGGCGGCGACCCGGACTACGTCGCGCTGCTGCCGTCGGGCTTCGCCATCCTGCCCGATGGGCCGGCGCACGACGGTGGCGACGGCGACGGCGGCGTCGGCGTCGGCTCCGGCGGGTCGCTGCTGACGGTGGCGTTCCAGATACTGGTGGACTCCGTCCCGACGGCGAAGCTCTCGCTGGGGTCGGTGGCGACGGTGAACAGCCTCATCGCCTGCACGGTGGAGCGCATCAAGGCGGCCGTCTCCGGCGAGAGCAATCCGCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014304