BGIOSGA014319

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Revision as of 03:56, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014319| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014319, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA014319

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014319, complete gene.

LocusTag

OSJNBB0085C12.17

Ensembl Transcript ID

BGIOSGA014319-TA

Ensembl Protein ID

BGIOSGA014319-PA

Length

4144

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30705107..30709250

Sequence Coding Region

30709238..30709250,30707217..30707329,30707007..30707095,30706789..30706902,30706617..30706704
,30706444..30706529,30706256..30706358,30706049..30706146,30705517..30705946
,30705107..30705427

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30705107..30709250 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30705107..30709250 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAACAACAGTTCATATGGTGAAAATGTTAGGAGAAAGTCCCACACACCTTCTGCTATTGTTATCGGCAGTGGGTTTGCAGGCATTGCTGCAGCCAACGCTCTCAGGAATGCATCATTTGAGGTTGTTCTTCTAGAATCTCGTGACAGGATAGGTGGTAGAATTCACACTGATTACTCTTTTGGCTTTCCTGTTGATCTGGGAGCATCCTGGCTTCATGGTGTTTGTGAGGAAAATCCCCTGGCACCAATTATTGGAAGGCTTGGACTTCCACTGTATCGCACAAGTGGAGATGACTCTGTGCTGTTTGATCATGACCTTGAGAGTTATGCTCTCTATGACACTAAGGGCCATCAAGTTCCCCAAGAGCTGGTAGAAAAGATAGGGAAGGTTTTTGAGACTATATTGGAAGAGACTGGCAAACTGAGGGAAGAAACTAAGGAAGACATTTCTATTGCGAAGGCCATTGCAATTGTTATGGAGAGAAATCCACACTTGAGGCAAGAAGGGATTGCTCATGATGTTCTTCAGTGGTATTTGTGCCGCATGGAAGGTTGGTTTGCTACTGATGCGGACGCAATCTCTCTTCAGGGTTGGGACCAGGAGGTACTGCTTCCTGGTGGCCATGGTCTCATGGTTCGTGGATATCGTCCAGTAATAAATACTCTGGCAAAAGGCCTAGATATACGCCTTGGCCACAGGGTTGTTGAGATTGTTCGCCACAGGAATAGGGTGGAGGTTACTGTAAGCAGTGGTAAAACATTTGTTGCGGATGCTGCAGTCATTGCTGTCCCCTTAGGTGTTCTTAAAGCAAACACCATTAAATTTGAACCTAGGCTGCCAGAGTGGAAGGAGGAAGCAATAAGAAAACTCTCAGTTGGAGTCGAGAACAAAATAATTCTCCACTTCAGCGAGGTTTTCTGGCCTAATGTGGAGTTCCTTGGAGTAGTTTCATCCACCACATATGGCTGCAGCTATTTCCTCAACCTCCACAAGGCTACTGGCCATCCTGTTCTAGTTTACATGCCTGCGGGTCGGCTTGCATGTGACATTGAAAAGCTGTCAGATGAGGCTGCTGCCCAATTTGCCTTCTCTCAGCTGAAGAAGATCCTGCCCAACGCTGCCGAGCCGATACATTACCTAGTGTCACATTGGGGCTCAGACGAGAATACACTTGGATCCTACACCTTCGATGGGGTGGGCAAACCTCGTGACCTGTATGAGAAGCTGCGGATCCCAGTCGATAACCTATTCTTTGCTGGAGAAGCCACCAGTGTCCAGTACACTGGCACGGTGCATGGCGCCTTCTCCACTGGTCTGATGGCAGCTGAGGAGTGCCGAATGAGGGTTCTTGAGCGGTTCAGGGAGCTGGACATGCTGGAGATGTGCCACCCTGCAATGGGGGAGCAGACCGCCACTGTCTCAGTCCCACTGCTCATCTCCCGGCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MANNSSYGENVRRKSHTPSAIVIGSGFAGIAAANALRNASFEVVLLESRDRIGGRIHTDYSFGFPVDLGASWLHGVCEENPLAPIIGRLGLPLYRTSGDDSVLFDHDLESYALYDTKGHQVPQELVEKIGKVFETILEETGKLREETKEDISIAKAIAIVMERNPHLRQEGIAHDVLQWYLCRMEGWFATDADAISLQGWDQEVLLPGGHGLMVRGYRPVINTLAKGLDIRLGHRVVEIVRHRNRVEVTVSSGKTFVADAAVIAVPLGVLKANTIKFEPRLPEWKEEAIRKLSVGVENKIILHFSEVFWPNVEFLGVVSSTTYGCSYFLNLHKATGHPVLVYMPAGRLACDIEKLSDEAAAQFAFSQLKKILPNAAEPIHYLVSHWGSDENTLGSYTFDGVGKPRDLYEKLRIPVDNLFFAGEATSVQYTGTVHGAFSTGLMAAEECRMRVLERFRELDMLEMCHPAMGEQTATVSVPLLISRL</aaseq>

Gene Sequence

<dnaseqindica>1..13#1922..2034#2156..2244#2349..2462#2547..2634#2722..2807#2893..2995#3105..3202#3305..3734#3824..4144#ATGGCGAACAACAGTAAGTTCCTGGCTTCGTTTGGCAGATTTTCTCATCCATTGTTTTTGTGGTGATTCTGTTGCTGATTTTTATGTTATTTTGTTTATTCCATTATAAAGTCCCCCTCTCAGTTCAAGACTTTTTTTTTTTGCATCTGTTAATGTAAAGTTAGGTGGAAAATCGAATTTAGAAGAAACTGTTTTATAAAGTTTGCTGATGTATGCTAATACCTCTGCTAGTAGTAGAATATCGAACATGTATTGTTTTAGGGATTTGTGCACTTAATGCAACCTTAGTGCAAAAACCGAAATTTTCCACTCTCTAGGTGGTTGTAGTGATAAAATTGCTTTGATAATCTAAACACACTGAGTTGCTTATGGTTGTTGGGAGGTGCCTAGTGGGCCAGATGAAAGAGACATCAGCCATCGTGGATGAGTTCCCATATTCCTCTGTCGGTGGTAGGAAGAGAAAACAAAACATTAGCTGTTTACACCTGTTGTACCAGCGCCTCAACCAATTGGAACCTTCTAGGGTTTTTCTCATGGCGAGAGAAAGTCCTCCATGTGGAGTTGTAGGCTCCTGCTGCGCCTTTTAGTTCCTGAAGAGCTTGCAATTTGTAAGACTCTAGTGTAAACCGTTCATGCAAGCACTCACATACTGGTTGCAGTTGAGGTCTAACAACATGCAGATGCAGTAGTGCTTGAACTTTAAATATCATATACTTACTATTCTAAAATTAGATCAGCAAAAGTGCATGTCATGTTAAGTTTAGTGCCATGCGGACATTCTATGCATGCATGATTCATATAGTATTGTAATGCATGTAGGGTGCAGATTATTATATGAGAATATTCGCTGGTGGATCTAGTATCTAAGTTTCTTTATCTTCCAATGCCACCATTTTCTTATTTTACTGTTCAGCTCTTATAAAATGTTTTTTCTTTGGCTTTCGTTGCTGTCTCATTTATGGATATCTTTACTTTTGGATTGTGCCTTTTAGTGCGCCTATAGTCATTGTGTGAGATGTTCGGTGGCCATTATTTTTTGCTTGTTAAGTGCTCTGAAGCATATCCGGCAGAGGGTTGTCTCGCTAAAAGATTGTCTAATTTATAGTATGCCACCAAATAATTCCAAGATAAACAGTATATAGCCACAAATTCATGTCATGTCTATCGCCCATTAGTCTGAATTTGCACCATGTCCACATAACTAGAAAGAACAGTACAATAATAATATTGTGTCCTTGCCTTTTGCACATCCTTTGAGGTCATTGTGTTTTAACGGAGAGTCTTTGGTGTGCCTGCCCAGCGAAAAATTTGATCAGTCCTACATCTCAGCTTCCAATGTGTAGCTACAGACCAAGCGGTTAGGTTTCTGTGGGGAATCAACAGAATGTTAAAATTGTCCTGTCTTACCTCACCATCATTGTTCTGAGACAGGGGAACATGCCTCACTACTAACCCTCCATGATGGAGGGGGTAGAGGAGGGTTGATGTGAGAAGAACAGGCGATATCGGCAATTTCATCACTTGGTAGGCTTCTTTATGTTAATTCTGTATAAACTGATTTTTATCATTTGGAGGTATAAAACCCCCTTTCACAATGAAGCAAACCGTTAGCCTTAAGGTGCAAAACCTTTAGATTCATGAAACACAAGCATCCATCCAACTACATCAAACATGTGAAACTTTCAGGTTGCTTCCTGTGTTGACAGTCATATAAAGAACATATGATGGTACATGTGCCAGCCAGTATTTGCACTTTAGATTTAAGCTGAATGAGCTCCTTTTTCAATGCAATATTTTGGCAAGATAATAACCAAAAATTGACACATCATTATTATTTTATAATGTTTTAACTTTTTATTACTACACTTTGTCACTCTCATTGAGGTTCCTTTTTTTTTTCCTTTTTTTTTGTAAAATCCAGGTTCATATGGTGAAAATGTTAGGAGAAAGTCCCACACACCTTCTGCTATTGTTATCGGCAGTGGGTTTGCAGGCATTGCTGCAGCCAACGCTCTCAGGAATGCATCATTTGAGGTAATATGTGATGCAGTTTATGGCCTAATTGTAATGATATAGGTTCAATGATCCTTTGAAGTGCATTTCAAATGTTGTGAAATTCTTCCCCACTGGTTATTCTAATGTGGTTTCTTTCCAGGTTGTTCTTCTAGAATCTCGTGACAGGATAGGTGGTAGAATTCACACTGATTACTCTTTTGGCTTTCCTGTTGATCTGGGAGCATCCTGGTGAGGTTCCTCTCTGACAATATTTTCTGAATTATTTGAAATGGTGGCAAAAGTTTATCTGGAACCATTATTTTTAATCCACTTCCATTTTGTGTGAGCATCAGGCTTCATGGTGTTTGTGAGGAAAATCCCCTGGCACCAATTATTGGAAGGCTTGGACTTCCACTGTATCGCACAAGTGGAGATGACTCTGTGCTGTTTGATCATGACCTTGAGAGGTAACTAGAGCTAGTTTATTTTGTATGTAACTTGAGAGATGATGGACCATAATAATCAACCATTTAACATGTTTTTTCCCTCAGTTATGCTCTCTATGACACTAAGGGCCATCAAGTTCCCCAAGAGCTGGTAGAAAAGATAGGGAAGGTTTTTGAGACTATATTGGAAGAGGTATTACCTTGTTTCAGTTTCCATGCTTATTGTTGTTGCATGATAATATTTTTGGTACTTGTTTTTCCCTAACATTTATATGTGCAGACTGGCAAACTGAGGGAAGAAACTAAGGAAGACATTTCTATTGCGAAGGCCATTGCAATTGTTATGGAGAGAAATCCACACTTGAGGTTTGTACCATCCAATTTCTGCCCATGTGCATAGGTTATCCTGATCTTTTGGTCATTTTGCCTGACCTGTCCTTGTTCACAACAGGCAAGAAGGGATTGCTCATGATGTTCTTCAGTGGTATTTGTGCCGCATGGAAGGTTGGTTTGCTACTGATGCGGACGCAATCTCTCTTCAGGGTTGGGACCAGGTAGGACTTTGGTTCCTGATATCAGCTACAATTGCCAATATTTTGCTCATGATGTACTCATGCTAGTTTGATTGCTATGTCTCATGTTCGTACTGTGCTGTGGGTGCAGGAGGTACTGCTTCCTGGTGGCCATGGTCTCATGGTTCGTGGATATCGTCCAGTAATAAATACTCTGGCAAAAGGCCTAGATATACGCCTTGGCCACAGGTATGCATATCCATTTAGTTTTTCCTTCTCACTTTAAAAGCAAAATTCATGGTTCCATCCACCATTCCTTATTGCTAATCCACATTATTTTCTTTTCTTTAGGGTTGTTGAGATTGTTCGCCACAGGAATAGGGTGGAGGTTACTGTAAGCAGTGGTAAAACATTTGTTGCGGATGCTGCAGTCATTGCTGTCCCCTTAGGTGTTCTTAAAGCAAACACCATTAAATTTGAACCTAGGCTGCCAGAGTGGAAGGAGGAAGCAATAAGAAAACTCTCAGTTGGAGTCGAGAACAAAATAATTCTCCACTTCAGCGAGGTTTTCTGGCCTAATGTGGAGTTCCTTGGAGTAGTTTCATCCACCACATATGGCTGCAGCTATTTCCTCAACCTCCACAAGGCTACTGGCCATCCTGTTCTAGTTTACATGCCTGCGGGTCGGCTTGCATGTGACATTGAAAAGCTGTCAGATGAGGCTGCTGCCCAATTTGCCTTCTCTCAGCTGAAGAAGATCCTGCCCAACGCTGCCGAGCCGGTTAGTATCTTGACAAAAATATCAAATTTGGCAATCAAGAATCTCTTTATGCTAGTTCTTACAACCATGCTGCCCAAATCTTATTGCAGATACATTACCTAGTGTCACATTGGGGCTCAGACGAGAATACACTTGGATCCTACACCTTCGATGGGGTGGGCAAACCTCGTGACCTGTATGAGAAGCTGCGGATCCCAGTCGATAACCTATTCTTTGCTGGAGAAGCCACCAGTGTCCAGTACACTGGCACGGTGCATGGCGCCTTCTCCACTGGTCTGATGGCAGCTGAGGAGTGCCGAATGAGGGTTCTTGAGCGGTTCAGGGAGCTGGACATGCTGGAGATGTGCCACCCTGCAATGGGGGAGCAGACCGCCACTGTCTCAGTCCCACTGCTCATCTCCCGGCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014319