BGIOSGA014359

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Revision as of 03:57, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014359| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014359, complete gene.| tag = OsI_173...")
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Gene Name

BGIOSGA014359

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014359, complete gene.

LocusTag

OsI_17377

Ensembl Transcript ID

BGIOSGA014359-TA

Ensembl Protein ID

BGIOSGA014359-PA

Length

4043

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30047424..30051466

Sequence Coding Region

30051347..30051466,30050857..30051041,30050397..30050674,30050245..30050295,30049788..30049983
,30049387..30049502,30048911..30049165,30047424..30048490

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30047424..30051466 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30047424..30051466 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGCTGTCAGAGAGCGAGGGGACAAATAGGGGGAGCATGTGGGAGCTGGATCAGAACCTTGATCAGCCCATGGATGAGGAGGCAAGCAGGCTGAAGAATATGTACAGAGAAAAGAAGTTTTCGTCGCTTTTGCTACTGCGGCTTGCATTTCAGAGCCTGGGGGTGGTCTTTGGTGACTTGGGTACATCACCATTGTATGTGTTCTATAATGCCTTTCCTCATGGAGTAGACGATGAAGAGGATGTTATTGGTGCTCTTTCCTTGATCATTTACACCCTTACCCTCATTCCTCTTCTGAAAGAAGACCACTTACAGATTGTTATCCTCACAGGTGGCACATTTGCTCTTTATTCCCTGCTATGCCGTCATGCAAAGATTAGCACTATACCCAACCAACACAAGACTGATGAGGACCTGACGACATATAGTCGGCAAACATACGAGGAGAATTCAGTAGGAGCAAAAATTAAAAGATGGCTAGAAGCGCATGCATATAAAAGAAATTGTCTTCTTATTGTTGTTCTCATTGGTACTTGTACAGCTATTGGAGATGGAATCCTTACCCCTGCTATATCAGTTCTTTCTGCATCAGGTGGAATAAAAGTTCAAAATCCGAATATGAGTACTGATGTTGTTGTAATTGTTTCCGTGATCATCTTAATTGGATTATTTAGCATGCAACACTATGGTACAGACAAAGTTGGATGGCTCTTTGCACCTATAGTGCTCCTCTGGTTCATTCTAATTGGAAGTGTCGGAGCACTGAACATACACAAATATAAAGGCTCTGTGCTAAAAGCATACAATCCAGTCTATATATACCGATCGCATTCACGTGGATTGTATTCCCATGCCTTCTACTGGCATACACAGGCCAGCCTGCTTATATCATGGCCCACAAGGACCATGTGGCTGATGCTTTTAATCGCCTCCATTCCAGATTCCATATACTGGCCAGCATTTGTCATAGCAACTGCAGCAGCAATAGTTGCAAGCCAGGCCACCATATCTGCGACTTACTCGATAATAAAGCAAGCTCTTGCACTAGGCTGCTTTCCCCGTGTAAAGATAGTGCACACCTCGAAGAAATTCCTTGGGCAGATCTACATCCCTGACATCAATTGGGTCCTTCTAATTCTTTGCATTGCTGTGACTGCTGGATTCAAGAACCAAAGTCAGATAGGAAATGCATATGGAACTGCGGTGGTTATAGTTATGCTAGTCACAACATTTCTGATGGTACCAATAATGTTGCTGGTGTGGAAGAGTCACTGGATTCTAGTTGTCACCTTTATTGTGCTTTCGTTGATGGTGGAAATCCCCTACTTCTCGGCCTGCTTATTGAAGATTGATCAAGGTGGTTGGGTCCCACTTGTCATTGCCACAGCCTTCTTCATCATCATGTATGTGTGGCATTTTTGCACAGTGAAGCGGTATGAATTTGAGATGCACAGCAAGGTCTCAATGGCCTGGATCCTTGGCCTCGGTCCGAGCCTCGGTCTGGTCAGGGTTCCAGGTATAGGCTTTGTGTACACTGAACTGGCAAGCGGTGTCCCGCACATCTTCTCCCACTTCATCACCAACCTCCCTGCAATCCACTCGGTTGTCGTCTTCGTCTGTGTGAAGTACCTTCCAGTGTACACCGTCCCGATGGATGAGCGGTTCCTCGTGAGGAGGATCGGGCCAAAGAACTTCCACATTTTCCGCTGTGTTGCGAGGTACGGGTACAAAGACCTCCACAAGAAAGATGAGGACTTTGAGAAGATGCTCTTCAACTGCCTCTTGTCCTTCCTGCGACTCGAGAGCATGATGGAGGGCTATTCCGATTCTGATGACTTCAGTGTGCCGGAGCAGAGGACGGAGGGATCCATCAGCAATGCATTTCTGGCTGAGAAAACCAACAACAACACAATGTGCTCCAATGGTGACCTGAGCTACTCATCACAGGACTCCATTGTGCCAGTGCAGTCACCTCTGAGGGGGAACAGCCTACTGAGGTATTCAAGCCAGGCCAGCCACACTGTCAGTGATGAACTGGAGTTCCTGAACCGGTGTAAGGATGCCGGTGTCGTCCACATCCTCGGGAACACCATCGTCCTCGCGAGGAGGGATTCGGGGATCATCAAGAAGATCGCGGTAAATTACATGTATGCCTTCATGAGGAAGATCTGCAGGGAGAACAGTGTGATCTTCAATGTTCCCCATGAGAGCTTGCTTAATGTTGGCCAATATATTATATATGAAACGCATTTTCCGGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MASLSESEGTNRGSMWELDQNLDQPMDEEASRLKNMYREKKFSSLLLLRLAFQSLGVVFGDLGTSPLYVFYNAFPHGVDDEEDVIGALSLIIYTLTLIPLLKEDHLQIVILTGGTFALYSLLCRHAKISTIPNQHKTDEDLTTYSRQTYEENSVGAKIKRWLEAHAYKRNCLLIVVLIGTCTAIGDGILTPAISVLSASGGIKVQNPNMSTDVVVIVSVIILIGLFSMQHYGTDKVGWLFAPIVLLWFILIGSVGALNIHKYKGSVLKAYNPVYIYRSHSRGLYSHAFYWHTQASLLISWPTRTMWLMLLIASIPDSIYWPAFVIATAAAIVASQATISATYSIIKQALALGCFPRVKIVHTSKKFLGQIYIPDINWVLLILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTFLMVPIMLLVWKSHWILVVTFIVLSLMVEIPYFSACLLKIDQGGWVPLVIATAFFIIMYVWHFCTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGFVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPMDERFLVRRIGPKNFHIFRCVARYGYKDLHKKDEDFEKMLFNCLLSFLRLESMMEGYSDSDDFSVPEQRTEGSISNAFLAEKTNNNTMCSNGDLSYSSQDSIVPVQSPLRGNSLLRYSSQASHTVSDELEFLNRCKDAGVVHILGNTIVLARRDSGIIKKIAVNYMYAFMRKICRENSVIFNVPHESLLNVGQYIIYETHFPA</aaseq>

Gene Sequence

<dnaseqindica>1..120#426..610#793..1070#1172..1222#1484..1679#1965..2080#2302..2556#2977..4043#ATGGCGTCGCTGTCAGAGAGCGAGGGGACAAATAGGGGGAGCATGTGGGAGCTGGATCAGAACCTTGATCAGCCCATGGATGAGGAGGCAAGCAGGCTGAAGAATATGTACAGAGAAAAGGTCTGAGATTTCTTTCTCTTCAGTTATTAGCGTATGAAAGTCGATTTGTTTTGCACAAATGAGGGCTTTCAGAATAGCTGAAGTAGATGTAAAGATCGGTCTCTGCATGTGACTAATTCATTTCATTGGCAGATTCACTACTAACTTTTTTAGATAATGAATTTGCTGCTTAGATGGATGGTACTGCACGAATATTTAGTTTGCCATTTGTAGGGCATGAAAAAACTGGATGTTTATACTGTTCTAATTGAAGTAACTGAGCTGGTAAATCAGTAATTTGTATTGACTGTTTTTCCTTAATACAGAAGTTTTCGTCGCTTTTGCTACTGCGGCTTGCATTTCAGAGCCTGGGGGTGGTCTTTGGTGACTTGGGTACATCACCATTGTATGTGTTCTATAATGCCTTTCCTCATGGAGTAGACGATGAAGAGGATGTTATTGGTGCTCTTTCCTTGATCATTTACACCCTTACCCTCATTCCTCTTCTGAAGTATGTTTTTGTGTCTTGCGGGCAAATGACAATGGTCAAGGTTAGATAATTGATCTTCCTACAATCTAAGTAGCATATAACATTGTAGCCTGAAACCATTTGACTGTTCTCGATATTACAAACAAATGTTGCTTGCGCAATTCTGCTTATTATTCACTTGATAACTTTTTACATATTTTCAGAGAAGACCACTTACAGATTGTTATCCTCACAGGTGGCACATTTGCTCTTTATTCCCTGCTATGCCGTCATGCAAAGATTAGCACTATACCCAACCAACACAAGACTGATGAGGACCTGACGACATATAGTCGGCAAACATACGAGGAGAATTCAGTAGGAGCAAAAATTAAAAGATGGCTAGAAGCGCATGCATATAAAAGAAATTGTCTTCTTATTGTTGTTCTCATTGGTACTTGTACAGCTATTGGAGATGGAATCCTTACCCCTGCTATATCAGGTAGACATCTTAATTTCTTTTTAATCAATACTCAGCATCATATTCTTCTGAGAAAATCCAATGCATCTTGAATCTGATTTATGATCTTTTTTGTGTTCCAGTTCTTTCTGCATCAGGTGGAATAAAAGTTCAAAATCCGAATATGAGTACTGGTAATGCTGTGTGCCCTTTATAGTCTATCAAATTCTTGGATATTGTAAATTCTGTATATACTGAGTAAAATCATGTTCTTCCTTGATGGAAGTAAGTCAGTGACATTTATATCTGTTTCTATGCATTATTATTGTCCCAAATGCATGATCCTTCACGATCTTAACAAGGATTCCAAAATCCCAATCTAATAATCATTATTTTCTTTTGCATTGATTGATGTTGCAAACTTGTTTGATCTTTGGTCTACCCTGTATTGGCAGATGTTGTTGTAATTGTTTCCGTGATCATCTTAATTGGATTATTTAGCATGCAACACTATGGTACAGACAAAGTTGGATGGCTCTTTGCACCTATAGTGCTCCTCTGGTTCATTCTAATTGGAAGTGTCGGAGCACTGAACATACACAAATATAAAGGCTCTGTGCTAAAAGCATACAATCCAGTCTATATATACCGGTATTTCCAGCGACGAAATTCTGATAGCTGGGCCTCTCTTGGAGGAATCATGCTAAGCATCACAGGTGAGGCCCTTTCTTCAGTAATAGAGTTTACCTGCATCAGCTTATGTAAAACCCATTGTAACATGCAATACAATGTTGTCCTCTTAAGGAACTGAAGCACTATTTGCTGATCTATGCCATTTTCCTGTATTTCCCATTCAGGTAACATATTTTAAGCAAGGCATTACCGGATCTTTATGCAATTGCGGGTTAACTAAAGTAAACATGTCTATTTTTTCAGATCGCATTCACGTGGATTGTATTCCCATGCCTTCTACTGGCATACACAGGCCAGCCTGCTTATATCATGGCCCACAAGGACCATGTGGCTGATGCTTTTAATCGCCTCCATTCCAGGTTCTTTCATCTCAACAGCTTTTCATCTACCTTTTGGTGGAATAGTTCATCCATGCTTTCCACTTGTCTAAGTTGTCTTGTGACAGAATGTGAATGTGCCACCACATCATGTCTGCTAGGTGCACATTGGCATCGTCCACAACCCATTATTGATAGCTTGTATTGCTTATGGCCCTATTTGTAATATGGTGCTCACTGTGAGATGTGTTTAATGATTGCAGATTCCATATACTGGCCAGCATTTGTCATAGCAACTGCAGCAGCAATAGTTGCAAGCCAGGCCACCATATCTGCGACTTACTCGATAATAAAGCAAGCTCTTGCACTAGGCTGCTTTCCCCGTGTAAAGATAGTGCACACCTCGAAGAAATTCCTTGGGCAGATCTACATCCCTGACATCAATTGGGTCCTTCTAATTCTTTGCATTGCTGTGACTGCTGGATTCAAGAACCAAAGTCAGATAGGAAATGCATATGGTAACATTTCACCTTTTATATAATATTTTTGAATAATTTGGCATGCCATGGAGCTGCCATTTTAGCATCCCAATGCAACATTTATATGCAAAAACATTTTAATACACTTTGTGCTAATCAGTAGTACTTTCATAAAACCATTTATATTTCATTTTGACTCTGGCCATGATTGGTGGTTACCTGACATTCACATACAAATCCCTGATGATGTAATACAAAAACTATAAATTCCAAATTTCCATCATTGTAGATATCGTGCCAAATTTGGATAAATAAATAGACCATTTAAACCAATACGACTGCTTCTAGTGACACCAATTTTTTTTCCTGAAAATGAGAGGCTGATACTGATTTTTCATGATATAATATGCATTGCATCATTAGTCAACTCTTGATTTCCATTTTATGATGTATGAACAGGAACTGCGGTGGTTATAGTTATGCTAGTCACAACATTTCTGATGGTACCAATAATGTTGCTGGTGTGGAAGAGTCACTGGATTCTAGTTGTCACCTTTATTGTGCTTTCGTTGATGGTGGAAATCCCCTACTTCTCGGCCTGCTTATTGAAGATTGATCAAGGTGGTTGGGTCCCACTTGTCATTGCCACAGCCTTCTTCATCATCATGTATGTGTGGCATTTTTGCACAGTGAAGCGGTATGAATTTGAGATGCACAGCAAGGTCTCAATGGCCTGGATCCTTGGCCTCGGTCCGAGCCTCGGTCTGGTCAGGGTTCCAGGTATAGGCTTTGTGTACACTGAACTGGCAAGCGGTGTCCCGCACATCTTCTCCCACTTCATCACCAACCTCCCTGCAATCCACTCGGTTGTCGTCTTCGTCTGTGTGAAGTACCTTCCAGTGTACACCGTCCCGATGGATGAGCGGTTCCTCGTGAGGAGGATCGGGCCAAAGAACTTCCACATTTTCCGCTGTGTTGCGAGGTACGGGTACAAAGACCTCCACAAGAAAGATGAGGACTTTGAGAAGATGCTCTTCAACTGCCTCTTGTCCTTCCTGCGACTCGAGAGCATGATGGAGGGCTATTCCGATTCTGATGACTTCAGTGTGCCGGAGCAGAGGACGGAGGGATCCATCAGCAATGCATTTCTGGCTGAGAAAACCAACAACAACACAATGTGCTCCAATGGTGACCTGAGCTACTCATCACAGGACTCCATTGTGCCAGTGCAGTCACCTCTGAGGGGGAACAGCCTACTGAGGTATTCAAGCCAGGCCAGCCACACTGTCAGTGATGAACTGGAGTTCCTGAACCGGTGTAAGGATGCCGGTGTCGTCCACATCCTCGGGAACACCATCGTCCTCGCGAGGAGGGATTCGGGGATCATCAAGAAGATCGCGGTAAATTACATGTATGCCTTCATGAGGAAGATCTGCAGGGAGAACAGTGTGATCTTCAATGTTCCCCATGAGAGCTTGCTTAATGTTGGCCAATATATTATATATGAAACGCATTTTCCGGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014359