BGIOSGA014361

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Revision as of 03:57, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014361| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014361, complete gene.| tag = OsI_173...")
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Gene Name

BGIOSGA014361

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014361, complete gene.

LocusTag

OsI_17373

Ensembl Transcript ID

BGIOSGA014361-TA

Ensembl Protein ID

BGIOSGA014361-PA

Length

5780

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30022976..30028755

Sequence Coding Region

30028619..30028755,30027983..30028054,30026675..30026810,30026100..30026154,30025726..30025877
,30025588..30025627,30025145..30025234,30024951..30025063,30024742..30024816
,30024477..30024516,30024303..30024385,30024141..30024218,30023919..30024062
,30023764..30023831,30023443..30023557,30023180..30023336,30022976..30023073

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30022976..30028755 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30022976..30028755 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACAAAGGGACGACACCGAATTGTTCCTCTTCTGCTTATGATGGTAGTAGAAACCATGCGCAAGTCGACCATGTCGGCATGCCAATGCCAAGGCCATCAGATAAGTTCTACGGCAGTGGCTGGTTTCCTCCCCAGAATTCTACAGAATTTTCACAGGAAACAGTTCAGTTCCCGCATAATTCCTCCGTTCCAAAGAAGGCCTTCAAGGGAAAGAAGAAAATTTTCTTGCTTGGGAAGAACAGTGCTGTTCTACAGTGCAGAATAGGCCCCAATTCACAGCAGAAAACCAACACGGCATGTACTGATCACGTAGCAAGATCCAGAAAGCGGACGTTGACTCTTAGCCTGGATCTTTCAAGGATTGATCGGATCATCCGGCGCTCCCTTGGATCACAAGGATTCACTTTGCCCACCGTCGAGCCGGTGCCGGAGTCCAGCGTGTCCAAGGTGGAGGAGAGGTTGCCGGAGGACAAAGAACGGTGGTGGAAGAAGGGGCTGAAGGCCATTTCGGAGGGGAAGCTAGCCGTCGTCCTTTTAGCCGGTGGTCAGGGGACTCGGCTTGGTAGCTCTGATCCTAAAGGATGTTTCAGTATCGGACTTCCGTCTGGAAAGTCGCTTTTCCAACTCCAAGCTGAACGGATTTTGTGTGTTCAAAAGCTTGCTGCTCAATCAAGTGATAGTCCAAATAACACCGTACCTATTCATTGGTATATAATGACCAGCCCCTTCACCGATGACATCACTCGCAAATTCTTCGAAAGCCGTAAATACTTTGGCTTAGAGGCAGACCAAGTGACATTTTTCCAACAAGGCACCCTTCCATGTGTTTCTGCTGATGGCAGATTTATTATGGAGACACCATACAAGGTAGCAAAGGCTCCTGATGGCAATGGTGGAGTTTATGCTGCCCTCAAGTCCAGAAGGTTGCTGGAAGATATGTCTTCACGGGGTGTAAAGTATGTAGATTGCTACGGGGTTGACAATGCACTGGTCCGCGTTGCTGATCCGACGTTCCTAGGTTACTTCATAGACAAAGCTGTATCTTCTGCTGCAAAGGTTGTTAGGAAGGCTTACCCACAAGAGAATGTTGGAGTATTTGTTCGACGAGGACGTGGTGGACCTCTCTCTGTAGTTGAGTATAGTGAAATGGACGCAGCTATGGCTACTGAAATTAATCAGTCAACGGGACGCCTTCGTTATTGTTGGAGCAATATTTGCTTGCATATGTTCACTTTGGATTTTTTGAATCAAGTAGCAAACAGCCTTGAGAAGGACAGTACTTATCATCTTGCTGAGAAGAAGATCCCTTCCATCCATGGGTACGCAATGGGCTTGAAGCTTGAACAGTATATATTCGACGCGTTCAGTTACTCCCCATCCACAGCACTTTTTGAGGTTTTGCGGGAGGAGGAATTTGCGCCTGTAAAGAATGCGAATGGCGCGTCTTATGATACCCCTGATAGCGCAAAGCTGATGCTGCTTCGTCTCCATAGTAGATGGGTAGTTGCTGCTGGTGGCTTCTTGACCCATTCTGTCCCATTGTACATGACAGGTGTGGAAGTTTCTCCACTTAGCTCCTATGCTGGAGAAAACTTGGAAGCCATTTGCCGCGGACGGACATTCCATGCGCCGAGTGAGATTTCCTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MNKGTTPNCSSSAYDGSRNHAQVDHVGMPMPRPSDKFYGSGWFPPQNSTEFSQETVQFPHNSSVPKKAFKGKKKIFLLGKNSAVLQCRIGPNSQQKTNTACTDHVARSRKRTLTLSLDLSRIDRIIRRSLGSQGFTLPTVEPVPESSVSKVEERLPEDKERWWKKGLKAISEGKLAVVLLAGGQGTRLGSSDPKGCFSIGLPSGKSLFQLQAERILCVQKLAAQSSDSPNNTVPIHWYIMTSPFTDDITRKFFESRKYFGLEADQVTFFQQGTLPCVSADGRFIMETPYKVAKAPDGNGGVYAALKSRRLLEDMSSRGVKYVDCYGVDNALVRVADPTFLGYFIDKAVSSAAKVVRKAYPQENVGVFVRRGRGGPLSVVEYSEMDAAMATEINQSTGRLRYCWSNICLHMFTLDFLNQVANSLEKDSTYHLAEKKIPSIHGYAMGLKLEQYIFDAFSYSPSTALFEVLREEEFAPVKNANGASYDTPDSAKLMLLRLHSRWVVAAGGFLTHSVPLYMTGVEVSPLSSYAGENLEAICRGRTFHAPSEISF</aaseq>

Gene Sequence

<dnaseqindica>1..137#702..773#1946..2081#2602..2656#2879..3030#3129..3168#3522..3611#3693..3805#3940..4014#4240..4279#4371..4453#4538..4615#4694..4837#4925..4992#5199..5313#5420..5576#5683..5780#ATGAACAAAGGGACGACACCGAATTGTTCCTCTTCTGCTTATGATGGTAGTAGAAACCATGCGCAAGTCGACCATGTCGGCATGCCAATGCCAAGGCCATCAGATAAGTTCTACGGCAGTGGCTGGTTTCCTCCCCAGTGAGTTCCATCTGGGGAATATGTGGCAAATCTTCTCACCTGCAAAAGCAAATCAGAAGAAAGCCAAAGACTAACCAGCCTCACAGGCTTCTTAGAACTCCTCATTAGGTACCTTGACAAGGATGCATGTTGCAAGAAAGACTGTATCTTGTTGGAACTGTAGTAGATGGTTCGTCACTAATAAGTAATAATAACCTAATAATATACCCCCATCTTATGCTAAACTGGACACTATTTTCTGTCTGTCTGAATTTGTGTAGTAACCTGACTACTAATTCATTTGTTTGTATCATTAGTGCAGACTAGAGATGCTGATTGTATGCAGATGCCTGTGCCAGATTGTCATGCTCAGGGTCACTGCTCTGCCAGCACAAAGACCCTTCATGTGTATTACTACTACATGTAATAATAGCTTAGACATTTGATATGGCAATGTGCATTGGACTAAGTTCTACCTAAATTTTGTTTCTGGTTTACCTGTCCTGAGTTTCTTGTTTGATGGAGTTGCAAATGTAGTTCCTGTGCACACACTGTGTTGATTCTTCGGACTTTTTTGGAATGCAGGAATTCTACAGAATTTTCACAGGAAACAGTTCAGTTCCCGCATAATTCCTCCGTTCCAAAGAAGGCCTTCAAGTACTCAAATGTTGTTCCTGTGCACATATTTTGTCGATTCTTCGCACACCTTTGGAACATATGAATTTTAGAGGATTTTCGCAATAAATAGTTTCAATTCCTGCGAAATTCTTTCGTTCCAAAGAAAGCCTTTAAAGTACTCAAATGTTCCTGTGCACATACTGTGTTGATTATACGGACATCTTTGGAACAGATGAATTTTACAGGATTTTCACCGGAAACAGTTTAGTTCCTGNGAAATTCCTCCATTTCAAAGAAGGCCAAATTCTAGTACTCGAATATATGGCTGGCATTTTTGTGTCTGCTCTCATTTTGGTTTCTCCATACTTTGGTTGGGCACTAAATTGTTGATACCAACACCAGTTGTTGGGAGATGCATTGGATGCCATGGAAGTACAGATCATTGGTCTTATCTGTGCTTTTGTGGAGTTGTGGTCCTTGACAAACCATGTCCAGAACAATGATCAGACAGCAAAAGGATTTGCCCTTCTGAGAGGCCCACCCACTAGCTGTAACACTGCAAGTCAAAATTTTCATGCAAAAACTTTGATGTACTTGCACTTTGTTAGGCTTTATTAGTAGTGGTTGAAACCTTTGGAGATGATATTGTGATGATAATATAGGCTGTCTTGCGGCCCTACGCTTAGTCAATTACATTAAGGATTACATTAAGGTGATACAGTCTGACTGAGAAAACACTGACAAAGTCCTTTATTGACAAGTAGTACCTTTAAGCTACATGAAAGTTCATAGCTAATGCAAGCAGCTGACAAAGTCCTGACCTCCAAATGGAGTATATAGATAGAAATTACTCTATGATTGCTGGTTTACTAACTGAAGTTGCAGCTTCCATTATGGGCTAAAGATGCTTCCTGATACAATATGATCCCAATATCCCCATGCTATCTCATGATAAGATGCAACTTTTAACAGAATAATGCCCTAATCCACATCTCTAAGCTACCTTAAGCTCACCAGCAGGCATATTCTCTGGGCATGTCCAGTGGAGACTTTCTTGCTAATCAACTAGGCATTATTTGTTACTTCTGGTTCAGATGTCAATTTTTTCATGGTACATTTTTTTCTTACTCTTTGCGTATTTTGTACTAGCTATACAGTTCTTCTACGGCTTTCTGGTACACCGACAACGAAGTTTTCTTGACTTCTTTTAGGGGAAAGAAGAAAATTTTCTTGCTTGGGAAGAACAGTGCTGTTCTACAGTGCAGAATAGGCCCCAATTCACAGCAGAAAACCAACACGGCATGTACTGATCACGTAGCAAGATCCAGAAAGCGGACGTTGACTCTTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTCGGTTTGGCCGGAATTTCGCGTCGAATGTTGATTCTTTCGTTGGGATTGTGTTTTCTGTCGGGAGCTCTCTGTCCGTTTCTGTTTGTCAGGGACGAACTCTGCATAAGAAGTTTGATTTTTTTTCCCTTTTTTTGGCCGGAATTCTGCCTGTAAGCTCTGGTCTTTGAATGTGGTTTTTTGGTCTAAGTGTGAATTCTGCAGGAGTTGATTTATCAGTTGAAATTTTTTACTGCGGTTTGTGGGGAAAAGGAGTTTGGATTTTGAGTGATAATTTACTTCACGCTTTCACAGCTTTGTTGCCAGTGTGACCAATTATTTATCTGCTCTCCATAGGTCTTAATCTGCATTGCTTACACTGTACAATAGCTCAAGAGAAACCTGCAGCATGATTTTGTTGTCATTTGAGCTTACCATTTCGACAGTGATCAATGGAGCTACATATACTGCATTTTTTTTTTCAGAGCCTGGATCTTTCAAGGATTGATCGGATCATCCGGCGCTCCCTTGGATCACAAGGTGAGAGGTCTCTCAGTTGAAGGGAAAGAACAATTATCTTTCCAATGTAGAACATTAGTTAATTGTATTTTTTTATCATCGCACTTGCCTTAGTTTATTTATAGATAATGGAAGCTTTTGATGAACTCAGTCAATTACATCAAGATGATAGAACTGTACCGAGAACACTTTATCAGTAATTGCCTTAGTTTTATGGTGTGATTATGCTCTTTCTAAGTGCAGGATTCACTTTGCCCACCGTCGAGCCGGTGCCGGAGTCCAGCGTGTCCAAGGTGGAGGAGAGGTTGCCGGAGGACAAAGAACGGTGGTGGAAGAAGGGGCTGAAGGCCATTTCGGAGGGGAAGCTAGCCGTCGTCCTTTTAGCCGGTGGTCAGGTGCTCTGATGGAAAGATTACCTGAATTTGCAATTTCTATAGTTTGTGCATTGAGAAGCAGCCTCCTTATGGTTTAATTTCTTTTCATGTATGTGCAGGGGACTCGGCTTGGTAGCTCTGATCCTAAAGGATGTTTCAGTAAGTTGATTCCACTTCAATCTTTGTATATTAGTACTTGAGTTTGTACGCACAAATGTATGGATATTTGTTGAGCCAAAAAAAGAAGTGAGGTGCTCTGAATTATTTCTGTTTTACACAATCTTTTTTGTTCATAGCTCTCAGAATGTTTATTTTAGAGTGTAATAATAATGATAAATGTAGTCTACATCACCTTAATGCCATTTAATCAAAGGAAATGACATATTCTAGTTTATCTCTATCCATCCATATTAGTGTGGAATTGCTCAGTTGCTCTTTTCGATAATTCTTGGTCCAACTCTGTCTATGTATATATCATGGCTTATTTTTCACCTCTTATTTCTGCCCTTTAGGTATCGGACTTCCGTCTGGAAAGTCGCTTTTCCAACTCCAAGCTGAACGGATTTTGTGTGTTCAAAAGCTTGCTGCTCAATCAAGTGATAGTAATGTCTTTTAACCACAATTTTACTCTCTTTTTTAATTTCGTTTCACATCTTTGCCCTGAAATTTGAAATAACTTGCAGGTCCAAATAACACCGTACCTATTCATTGGTATATAATGACCAGCCCCTTCACCGATGACATCACTCGCAAATTCTTCGAAAGCCGTAAATACTTTGGCTTAGAGGCAGACCAAGTAAGATCAAGTACTTTTTTTTTTCATTTGTGTTAACTATTCCAATGGAATTTCAACAAAAGATCCAACAGGATCCCCCATTCACTAGTAATGTTTAATAGGTAGGTTTGAACAGCTGAACATTTTCTTGGCAGGTGACATTTTTCCAACAAGGCACCCTTCCATGTGTTTCTGCTGATGGCAGATTTATTATGGAGACACCATACAAGGTACCATCTTCTATTATTTTTCTAATCTTCCACTGATTGATCTTGTATTACTAGGAGGTGATACTGCGGTTTGTAACAACTTGATTTTCGAGTTTGACACATGGTCTGAGATCTCACAATTCAAGTGCAATTGTGATACCTACAAATATTGTTTTGATGCTGCCTATTTAAAATGTTAAATGATGGCATTCTTTTTTTTTTTTCACATGCTCTGTTCGAAACCAGGTAGCAAAGGCTCCTGATGGCAATGGTGGAGTTTATGCTGGTAATCTCCCAAAAAGATGTATTGTATTTCTAGTTGTAGTGTTGCATGGTCATTTCTGATGCCTGGTTTTCACTACTGCAATATCCTACAGCCCTCAAGTCCAGAAGGTTGCTGGAAGATATGTCTTCACGGGGTGTAAAGTATGTAGATTGCTACGGGGTTGACAATGCACTGGTGAGGACATTAACTTCCCCATAGGATAATCCATATAACCTTCTGCGTTTTCTCCTCATTCGCTTATCAATATTATGTATGCAGGTCCGCGTTGCTGATCCGACGTTCCTAGGTTACTTCATAGACAAAGCTGTATCTTCTGCTGCAAAGGTTGTTAGGAAGGTACAGTCAAATACTTCTCATGCTTCATATCATTAATCCAATATGCACCATGTTGATAGTAAATAATATGCTGAACAGGCTTACCCACAAGAGAATGTTGGAGTATTTGTTCGACGAGGACGTGGTGGACCTCTCTCTGTAGTTGAGTATAGTGAAATGGACGCAGCTATGGCTACTGAAATTAATCAGTCAACGGGACGCCTTCGTTATTGTTGGAGCAATGTATGTTCTATCCTTTGTTTCTCAATCCCTCCTGGTTGCACTTTCTCTTGAGGTGTATAACAACCGCATGTTCTTATCTCACTGCAGATTTGCTTGCATATGTTCACTTTGGATTTTTTGAATCAAGTAGCAAACAGCCTTGAGAAGGACAGTACGTGAGTGCTTCTATAACTGTTTTAAGTCTGAAGCAGTAGGAATTCATTGTGTTTACTTTCTTTGCAAATTACAGTAGTTATCTATTTTCTCGTTATGCCCCTCTTACTCTTCCTAAGAAAGTGAGAGCCATGTTTAAAACTGCAAGCTCCATCATTCATTCTATTGTATTTGTAGCACATGAAATTTACAAAACTTTTGTGTCCAGTTATCATCTTGCTGAGAAGAAGATCCCTTCCATCCATGGGTACGCAATGGGCTTGAAGCTTGAACAGTATATATTCGACGCGTTCAGTTACTCCCCATCCACAGCACTTTTTGAGGTTCAACTTCTCAGTCGCCTATGCTCTTATAACATTCTAGATGTCATGCTGTGTCCTTTTGTTATGATTTTGAGAAACTCATCGGTATACATATCTGAAAATTCAGGTTTTGCGGGAGGAGGAATTTGCGCCTGTAAAGAATGCGAATGGCGCGTCTTATGATACCCCTGATAGCGCAAAGCTGATGCTGCTTCGTCTCCATAGTAGATGGGTAGTTGCTGCTGGTGGCTTCTTGACCCATTCTGTCCCATTGTACATGACAGGTAGATTTTCTCCTGTCCAATACATTCAGAAACTTGCCAAGAACAAAAAACAAGGAAAAATGATATTTTCTTTTACTAATATTGTCATGATTGATTTTGCTTGTAGGTGTGGAAGTTTCTCCACTTAGCTCCTATGCTGGAGAAAACTTGGAAGCCATTTGCCGCGGACGGACATTCCATGCGCCGAGTGAGATTTCCTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014361