BGIOSGA014381

From RiceWiki
Revision as of 03:57, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014381| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014381, complete gene.| tag = OS07G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014381

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014381, complete gene.

LocusTag

OS07G0649500

Ensembl Transcript ID

BGIOSGA014381-TA

Ensembl Protein ID

BGIOSGA014381-PA

Length

4056

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29672881..29676936

Sequence Coding Region

29676653..29676936,29673743..29675921,29672881..29673312

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29672881..29676936 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29672881..29676936 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGGCCAAGGTGGCCACCGGCGAGGAGGAGCACGGCGGAGTGCAAGTCAAATCATCGCATGGCGGCGAAGGCGGCAACAACAAGGCGGCCGCCGCGCCGGAGAAGCGGCTGAATCGCTTCGTGCACGTCGTTGCGATGACGGAAAGGGTGGGCAACGCGCTCGGCACGCTGGCCTTCACCTGGGCCACCGTCGTCCTCCTCGGCGGCTACCCCACCGTGCTCCGCCCTGACGACGATTTCTGGTTCGCCACGGTCATCGTCTTCCTCGAAGCCGCACGGATGTTTAGCCGCGAAAACAGACTGGATTACCAACTGTTTTTCAGCACTAGAGGAGCTTTTAGGCGTCTTGGCTGGAATGGTCTGCTGACTGTGATGGTATACTTTTCCACCGTGCTGGTGATCCTGAAAAACTATTATTTCCTTCGTGGTGGAAGCGTATTGGTGCCTTTAATTGTGGTTATGGCAATGCTAGTTGCAATTGGACAAATGCTGTCTCCAAGAGCTCTAAAACTACTAAGCAATCCGCTACGCCATGCCATATCACTGTGGAGCCCATTACTTTCAATCATATTGCTGGGTCCATGTATACCACAACCAGTTTATGATGTTGAAAATCAGGAAGTAATTTTAAAACACTCAAGGACCAGATGGACATTGTACATAGTGCTATTTTTGTTTGTCCTCCTACCGACAATCAGCAGGCTGCGGTTCCCATGTATCGTAAAACTAGTAGACAGTGTTGTGAGCAGAAAACAGTTAGCTTGGCGTCAGGTTATTCTAAACTTTTGCATGTTTGCTGCAATAGTGATGCTAGTATTCACTTTCAATGGGTTCTACGGTCGACTTATAATGGTGGTGTTCCAAGTCTATGCTTTTCTGGTTGTGTCATTGGGCAACTTCCAGATTCCAGTAGCTGTTGTGCGCGTTCTGCTGGCACTGCAACGCCTTGTACCGCAGAACTATATTGCAGATGGTGTTAGTGCCGAGCAGGATGCCGTGCAAAACCTAAAGCCATCTCTAAACATCTTCTACTGTATGGTGATTGGGCAAGGAATTCTCTACATTGTGGCCTGCATGCTGGAGGTCTTTTCCTTCATCCCAAAGAGATCCCTCATCATCCGTGGAGGATTCAGAGGTCAGCTGGGAGTGAAATATGCCAATTTATACTACGCATATGCCTTTGAGAAATGCATGGGAGGGTCTGTACTTGCTCCAAAGAAGATCAACCTCATCACCTTTGCCATGGATTCTCTGAACTCAGACTCAACCAAGAAGAAGCTCTATGGGGTTCAGATGCTGCATAGCTTTCTGAAAAAGGAGCACTTAAGGACTAAAATGATCCCAAAACTCACCAGTTCCACGAAGACGGTGGCCTCGTTGTTCAATATGTTGGGCTGGACGAGTGATGGCGATGCAGATGTTAGATTGTTTGCCGCGAAGGTCACTGCCGAGCTAGCTGGTAGCCTCCGAGTCGTTGCTATCCCTGGAGCAATACAGATAGTAGCATCACTACTGGACACCGATCACCAACTGAAAATAAGGGACCATTTTTTGTTCATTGATAGCCAAGAGGCAAGAGAAGAAGACTTACCAATTAAGCATGTTGGCATGGATGAACAGAAATCCACAGTGCTTAAGTACTGGAAACAGATGGTCATAAACTGTCTGACTCCTGTGGATGAACCGTTTAATATAGATGAACTGAACTTACATATGGCCAGATGTTGGAAGCGGATCACCAAATTCTGGTCAATTCCAGACGAGGAGCCATCCACGGACCAAGATTTCCTTCCTGTACAGGGATTGCTAATCCTTGAGAGGCTTGCTAACTTTGATACTGGAAACTGCATGGAAATCAGCAGAGCTACAGGCCTCATCTCAAAGATGATAGATTTTACAAGCTACAGAAATTATATTACAAGTATCAACGAAGAACATCAAATCATGCTAGCAGGTTTGTCACTGAGGGTGCTGAGAACACTTGCAAGCACTAAAGGGAAGTTCGGTGTAACTCTGCGACAACAGATCTTGGAACATTCCTTCGTATTGAACAATCTTGCAGAGATCTTGAATGATAGTGTGGGTGGCCGTGAACTGAGGGAGCTGGCAGCAGAAATCATTAAAAACCTTGCCATGGATAGAAATGCTAGTGAGGACATTGGGCATTGCCCAGTGATTATCAGTGGTTTGATGCGTGCATTTCTCAGCCAAGTTTCTAGTCACTTGCTACGAAAAATCACTGGTCAAGCACTTGCAATGCTGGCAATGGAGAGTGCCAATAACTGTTTGCTTATGTTAAGGGAACCAGGGTTTGTGTTCATTGAGGAACTTACAGCTATGATCCGTTATGACAAGTACAAATATACAGCAGTGAGTCTGCTGGGGAGTATGTGTGAGCATGCTTGGTCTGAGCTCAGCAACTCAGACCTGAAGGAACTGTCTTACACCCTGCAAGAGGTGCTAAAAGGAATAATGGATGCAGAAGGAGCAGAACTAGAGGTCCTTATTGGCTTTAGTTCACATATATGTAAAATCATTCCTGATGACTTTGCCCAAGAATTAGAGCATAGTCAGATTAAGAAGAAATTTGTAAAGAGGCTTGTTAGTGCCCTTAATGCACATATGAGACCCAGTGCTGATTGTCCCGGCATCAGGAGGGTGATTGTTCAACACGCCATAAACTTGATGGAGTTCGATTCTCGCTACGCAAATGATTTCCACAAATGCCTATCAATGGTAGAGAACACATCGACAAGGTTAGAAAACTACAGGTTGTTCTCCGGTGACGTAGGACTAATGGAGCATCGCACAACACTTTCCACTCTTGTGGCCAGAGCAAAAGAGCTGATGGGCCGTGAGTGGGTACAAGGCATCAGCACTGCCACCTGA</cdnaseq>

Protein Sequence

<aaseq>MAKAKVATGEEEHGGVQVKSSHGGEGGNNKAAAAPEKRLNRFVHVVAMTERVGNALGTLAFTWATVVLLGGYPTVLRPDDDFWFATVIVFLEAARMFSRENRLDYQLFFSTRGAFRRLGWNGLLTVMVYFSTVLVILKNYYFLRGGSVLVPLIVVMAMLVAIGQMLSPRALKLLSNPLRHAISLWSPLLSIILLGPCIPQPVYDVENQEVILKHSRTRWTLYIVLFLFVLLPTISRLRFPCIVKLVDSVVSRKQLAWRQVILNFCMFAAIVMLVFTFNGFYGRLIMVVFQVYAFLVVSLGNFQIPVAVVRVLLALQRLVPQNYIADGVSAEQDAVQNLKPSLNIFYCMVIGQGILYIVACMLEVFSFIPKRSLIIRGGFRGQLGVKYANLYYAYAFEKCMGGSVLAPKKINLITFAMDSLNSDSTKKKLYGVQMLHSFLKKEHLRTKMIPKLTSSTKTVASLFNMLGWTSDGDADVRLFAAKVTAELAGSLRVVAIPGAIQIVASLLDTDHQLKIRDHFLFIDSQEAREEDLPIKHVGMDEQKSTVLKYWKQMVINCLTPVDEPFNIDELNLHMARCWKRITKFWSIPDEEPSTDQDFLPVQGLLILERLANFDTGNCMEISRATGLISKMIDFTSYRNYITSINEEHQIMLAGLSLRVLRTLASTKGKFGVTLRQQILEHSFVLNNLAEILNDSVGGRELRELAAEIIKNLAMDRNASEDIGHCPVIISGLMRAFLSQVSSHLLRKITGQALAMLAMESANNCLLMLREPGFVFIEELTAMIRYDKYKYTAVSLLGSMCEHAWSELSNSDLKELSYTLQEVLKGIMDAEGAELEVLIGFSSHICKIIPDDFAQELEHSQIKKKFVKRLVSALNAHMRPSADCPGIRRVIVQHAINLMEFDSRYANDFHKCLSMVENTSTRLENYRLFSGDVGLMEHRTTLSTLVARAKELMGREWVQGISTAT</aaseq>

Gene Sequence

<dnaseqindica>1..284#1016..3194#3625..4056#ATGGCGAAGGCCAAGGTGGCCACCGGCGAGGAGGAGCACGGCGGAGTGCAAGTCAAATCATCGCATGGCGGCGAAGGCGGCAACAACAAGGCGGCCGCCGCGCCGGAGAAGCGGCTGAATCGCTTCGTGCACGTCGTTGCGATGACGGAAAGGGTGGGCAACGCGCTCGGCACGCTGGCCTTCACCTGGGCCACCGTCGTCCTCCTCGGCGGCTACCCCACCGTGCTCCGCCCTGACGACGATTTCTGGTTCGCCACGGTCATCGTCTTCCTCGAAGCCGCACGGTATATACAGCACCTTAGTGTTTGATATCGTTGATTTTTTTCTCATAATGTTTGATAATTTATTTTATTTTAAAATTTAGTATAAATATTCAAAAGTACGAGTCATTATAGTTTCTTTGATGATAAAAAGTCACAATAACAAAATACATAACATTTATATTTTTTTAATAAGATGAAGCACCATAGTAAAAGTTAACGATATCATATATTTAAGAAACAGAGGTAGTTTATATATGACTCTGATAATTGTCAAAATATATATGATCAGATTTGCTTCTGGGCATCTGGCTAGTAAAGTATAACTAACACTCAGATCATGTAGATGGCCATGATCTTTAGCCATATGTAGCAGGAAATAGTTGAGTACAATCATGTGGATATTATATATCTACAGTAATTGAGAAACTAACCAATCTTGGACAAAAGAGAAACTTCTTATAATGTTTTACTTTTATTTCCCCTACTAAACAGATACTACAAACCATGCATATGCATCCATTGCCATTCTGACAAATTGTTCAAAAGTCAGAGCAACAACTAAGGCCTTTTAGGGGAAAAAAAGAACTTTGCACATGTTAAACTTTCACTTTCAACTTACACCAAGATAATTTATGACTTTCCCTTTAGACAAAATAGTGAAAACCATTCTGATTTATATACATCATGCTCTTATGTTTATACATTATCATACGCTAAGTTCTTTTATGACAATGGCACAACTCATACATCAGGATGTTTAGCCGCGAAAACAGACTGGATTACCAACTGTTTTTCAGCACTAGAGGAGCTTTTAGGCGTCTTGGCTGGAATGGTCTGCTGACTGTGATGGTATACTTTTCCACCGTGCTGGTGATCCTGAAAAACTATTATTTCCTTCGTGGTGGAAGCGTATTGGTGCCTTTAATTGTGGTTATGGCAATGCTAGTTGCAATTGGACAAATGCTGTCTCCAAGAGCTCTAAAACTACTAAGCAATCCGCTACGCCATGCCATATCACTGTGGAGCCCATTACTTTCAATCATATTGCTGGGTCCATGTATACCACAACCAGTTTATGATGTTGAAAATCAGGAAGTAATTTTAAAACACTCAAGGACCAGATGGACATTGTACATAGTGCTATTTTTGTTTGTCCTCCTACCGACAATCAGCAGGCTGCGGTTCCCATGTATCGTAAAACTAGTAGACAGTGTTGTGAGCAGAAAACAGTTAGCTTGGCGTCAGGTTATTCTAAACTTTTGCATGTTTGCTGCAATAGTGATGCTAGTATTCACTTTCAATGGGTTCTACGGTCGACTTATAATGGTGGTGTTCCAAGTCTATGCTTTTCTGGTTGTGTCATTGGGCAACTTCCAGATTCCAGTAGCTGTTGTGCGCGTTCTGCTGGCACTGCAACGCCTTGTACCGCAGAACTATATTGCAGATGGTGTTAGTGCCGAGCAGGATGCCGTGCAAAACCTAAAGCCATCTCTAAACATCTTCTACTGTATGGTGATTGGGCAAGGAATTCTCTACATTGTGGCCTGCATGCTGGAGGTCTTTTCCTTCATCCCAAAGAGATCCCTCATCATCCGTGGAGGATTCAGAGGTCAGCTGGGAGTGAAATATGCCAATTTATACTACGCATATGCCTTTGAGAAATGCATGGGAGGGTCTGTACTTGCTCCAAAGAAGATCAACCTCATCACCTTTGCCATGGATTCTCTGAACTCAGACTCAACCAAGAAGAAGCTCTATGGGGTTCAGATGCTGCATAGCTTTCTGAAAAAGGAGCACTTAAGGACTAAAATGATCCCAAAACTCACCAGTTCCACGAAGACGGTGGCCTCGTTGTTCAATATGTTGGGCTGGACGAGTGATGGCGATGCAGATGTTAGATTGTTTGCCGCGAAGGTCACTGCCGAGCTAGCTGGTAGCCTCCGAGTCGTTGCTATCCCTGGAGCAATACAGATAGTAGCATCACTACTGGACACCGATCACCAACTGAAAATAAGGGACCATTTTTTGTTCATTGATAGCCAAGAGGCAAGAGAAGAAGACTTACCAATTAAGCATGTTGGCATGGATGAACAGAAATCCACAGTGCTTAAGTACTGGAAACAGATGGTCATAAACTGTCTGACTCCTGTGGATGAACCGTTTAATATAGATGAACTGAACTTACATATGGCCAGATGTTGGAAGCGGATCACCAAATTCTGGTCAATTCCAGACGAGGAGCCATCCACGGACCAAGATTTCCTTCCTGTACAGGGATTGCTAATCCTTGAGAGGCTTGCTAACTTTGATACTGGAAACTGCATGGAAATCAGCAGAGCTACAGGCCTCATCTCAAAGATGATAGATTTTACAAGCTACAGAAATTATATTACAAGTATCAACGAAGAACATCAAATCATGCTAGCAGGTTTGTCACTGAGGGTGCTGAGAACACTTGCAAGCACTAAAGGGAAGTTCGGTGTAACTCTGCGACAACAGATCTTGGAACATTCCTTCGTATTGAACAATCTTGCAGAGATCTTGAATGATAGTGTGGGTGGCCGTGAACTGAGGGAGCTGGCAGCAGAAATCATTAAAAACCTTGCCATGGATAGAAATGCTAGTGAGGACATTGGGCATTGCCCAGTGATTATCAGTGGTTTGATGCGTGCATTTCTCAGCCAAGTTTCTAGTCACTTGCTACGAAAAATCACTGGTCAAGCACTTGCAATGCTGGCAATGGAGAGTGCCAATAACTGTTTGCTTATGTTAAGGGAACCAGGGTTTGTGTTCATTGAGGAACTTACAGCTATGATCCGTTATGACAAGTACAAATATACAGCAGTGAGTCTGCTGGGGAGTATGTGTGAGCATGCTTGGTCTGAGCTCAGCAACTCAGACCTGAAGGAACTGTCTTACACCCTGCAAGAGGTGAGTGCCGCCAATTCTTCTTTCTTCCTTCCGTTTTGTTTTTGAGAAAACTGCTAATTCATGTTACAAGTGCACTATTGGAGGTGGATATGGTAACTTAACATTTGCGTGTTTGTAATCTTTACTCTTTTTTCCCCATAAATTGTTAGAGAAATCTGATTTGCAATTACCAAATTTTGTTTAGAAATGCTGACATGCATACACATCGGTGCTCTTAATATTAATCGCGTATTTTAGTTCATGCCATGTAATTGACTAATTTGAACACTGCAACTTACAAGAAATATTGCACATCTAAGTGTACTGTTGGAAGCATCCTGGTTCCTGGATGACCATGAACTGAAGTTGCAAATGTAGCTGAAGTATGTCAAATAATGTATTTAGCAATCATGGTTTATCAGCTCAAATGGCATAACTATTTCCAATGCAGGTGCTAAAAGGAATAATGGATGCAGAAGGAGCAGAACTAGAGGTCCTTATTGGCTTTAGTTCACATATATGTAAAATCATTCCTGATGACTTTGCCCAAGAATTAGAGCATAGTCAGATTAAGAAGAAATTTGTAAAGAGGCTTGTTAGTGCCCTTAATGCACATATGAGACCCAGTGCTGATTGTCCCGGCATCAGGAGGGTGATTGTTCAACACGCCATAAACTTGATGGAGTTCGATTCTCGCTACGCAAATGATTTCCACAAATGCCTATCAATGGTAGAGAACACATCGACAAGGTTAGAAAACTACAGGTTGTTCTCCGGTGACGTAGGACTAATGGAGCATCGCACAACACTTTCCACTCTTGTGGCCAGAGCAAAAGAGCTGATGGGCCGTGAGTGGGTACAAGGCATCAGCACTGCCACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014381