BGIOSGA014401

From RiceWiki
Revision as of 03:57, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014401| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014401, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014401

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014401, complete gene.

LocusTag

OSJNBB0015N08.5

Ensembl Transcript ID

BGIOSGA014401-TA

Ensembl Protein ID

BGIOSGA014401-PA

Length

2933

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29348080..29351012

Sequence Coding Region

29350698..29351012,29350349..29350542,29348080..29348536

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29348080..29351012 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29348080..29351012 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGGCCGCTTGGGCAGCAGCAGGTTGGCGCGGCGGCGGCTCTGGTGATCGTCGTGGCGTGCTGCGTCGTCGCGGGGTGCTCGGGCGCGCGCGGGCGCGGTTTCCGCGAGGAATTCGACGTGATATGGGGCGAAGACCACGTGAGGGTCACCGACGAGGACGACGCGGCCACGCGGCAGGTGGTGGCGCTCACCCTCGACCAAGCCTCCGGCTCCGGGTTCCAGTCCAAGGACCAGTTCCTCTTCGGCGAGTTCAGCATGGAGATGAAGCTCGTCCCCGGCGAATCGCCCGGCACGGTCGCCACCTTCTACCTGACATCGGAGGGAGATGCGCACGACGAGATCGACTTCGAGTTCCTGGGGAACGTGAGCGGCGAGCCGTACGTGATGCACACCAACGTGTTCGCGCAGGGGAGAGGGAACCGGGAGCAGCAGTTCTACCTCTGGTTCGACCCCACCGCCGACTTCCACAACTACACCATCCTCTGGAACCCCCTCAACATCATCTTCTCGGTGGACGGCAAGGCGGTACGGGTGTTCAAGAACCACGAGGCCGCCGGCGTGCCGTACCCAAGCGGCCAGGCGATGAGGGTGCACGCGAGCCTGTGGAACGGCGACTTCTGGGCGACGCGCGGCGGCCAGGTGAAGATCAACTGGACCGCCGCGCCGTTCGTCGCGTCGTACCGGACCTACGCCTACAGCGCCTGCGCCGTGCCGGCGGCCGGCGGCGGTGGCGGCGGCCCGTGCACGTCCGGCCAGCTACCGAATTCCACGTCGTCGCCGTCGACGTGCGACTGCGGCGGCGCGTGGATGGACAGGCAGCTCGGCGCCGACGGCGAGCGCGACGTGGCGTGGGCGCGGGCGAACTACATGATCTACGATTACTGCGGCGACCAATGGCGGTTCCCGCAGGGCCTTCCGGCCGAATGTAGCCTCGACCAGAGTTCCGGCCATCGCACATAG</cdnaseq>

Protein Sequence

<aaseq>MARPLGQQQVGAAAALVIVVACCVVAGCSGARGRGFREEFDVIWGEDHVRVTDEDDAATRQVVALTLDQASGSGFQSKDQFLFGEFSMEMKLVPGESPGTVATFYLTSEGDAHDEIDFEFLGNVSGEPYVMHTNVFAQGRGNREQQFYLWFDPTADFHNYTILWNPLNIIFSVDGKAVRVFKNHEAAGVPYPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSACAVPAAGGGGGGPCTSGQLPNSTSSPSTCDCGGAWMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECSLDQSSGHRT</aaseq>

Gene Sequence

<dnaseqindica>1..315#471..664#2477..2933#ATGGCGCGGCCGCTTGGGCAGCAGCAGGTTGGCGCGGCGGCGGCTCTGGTGATCGTCGTGGCGTGCTGCGTCGTCGCGGGGTGCTCGGGCGCGCGCGGGCGCGGTTTCCGCGAGGAATTCGACGTGATATGGGGCGAAGACCACGTGAGGGTCACCGACGAGGACGACGCGGCCACGCGGCAGGTGGTGGCGCTCACCCTCGACCAAGCCTCCGGCTCCGGGTTCCAGTCCAAGGACCAGTTCCTCTTCGGCGAGTTCAGCATGGAGATGAAGCTCGTCCCCGGCGAATCGCCCGGCACGGTCGCCACCTTCTACGTACGTAGTAATATTATACAATTAAGCCAGTAATCATACATACACCACATGCAAATTAAGTAAAGTCACCTATATGGCTATATATCATACTACTTTTAGTGCATTATTACGCATGTGTATAATAGACTATCTGTGTGATACTGTGATATGTGCAGCTGACATCGGAGGGAGATGCGCACGACGAGATCGACTTCGAGTTCCTGGGGAACGTGAGCGGCGAGCCGTACGTGATGCACACCAACGTGTTCGCGCAGGGGAGAGGGAACCGGGAGCAGCAGTTCTACCTCTGGTTCGACCCCACCGCCGACTTCCACAACTACACCATCCTCTGGAACCCCCTCAACATCATGTACGTATGCTACGCAACAAACGCACTCGTCTTACAATTAACCTCTTATAATCTCGTGTATTCCGCGCTCTAGCTAGCTTGCTGGTACAGTGTCCCAGCCAGATCAAGATTCAAGTCCTAGTCCGTGCCAAGTGAGAGAGAAATTAAGTTGGGTACAACCCGTACAAGATCTTTTTGTCTTCCCGTGAGCTGACTTAGGTTGAACCGTACAAGTTCACAACTTCACGTGTGGTCGTGTGCTACGTCACGGAGTCGTGGAACGTGGCATATACTCCGTTTAGTTCGGGATTTTTTTTATTTATACATTTTTTTATTAAAATATTTACAAAAATAATTTTTTGTTTCAAAAATTTACAAATCGCCTGCCGCCCTTTGGGATGGCGATTTTTAAAAATCACCCTTCCAGAGAGCGGTAAGGGACCTAAATGCAAACTTTCCAGCACAACTTGTTAGCTCTATGATTTTACAATTTAAAATTATATTATATAAAGTCAAATGAAATAAAACTTTATATAAAATTGTAGAGCTCAAGAAGATCTACAACTTTGTAGTTAACAATTTTTTCATTTAAGATGTTTTAGATATTCAAATATTCGTTACAAAATATAAAACACATTTTTAAAAATATCATATCTACATTTTAAACGACATTGGATGAAGATAAACTTTATATAAAAGTTGTAGATCTATAACTTTGTAGTCTATCACTTTTCTATTTAAAATCATTTGAAGTATCGATTAGATTTGTATAAATAAAAAAAATTCGTTCGGTTGGGAGCCTAGCCAATGGGCCATGAGCCCATGACCGAATACTCGGATTTATCAGCCCCTATCCCATACTTGTAATGGGCCGGGTGCTCAGGCATGTCCTTTGAAAATGTCCTAAACTTCACATGAGAAATTTGCATTTCTGCATCAGAAATATTTATCACTGTCGGTTTGGTACTTTGTTGCCACGAAAACGTCGTTTTGTAGGACTTGTACACAAGCACTTAGAGCAAGTTTAATAGTAGAGTTCAATGCCAATTGTTAGTTTATTTTAAAGCCAACACATATAGTAATAGATTAGCTATAATAATGTCTTAAATTTATCTTCTCCTCTTATAGTAATAGATTAGCTATAATAATGTCTTAAATTTATCTTCTCCTCTTATTTTCTCTCACTTATAGATTTGATGTATTTGTTTTGGAACACGTGTTAAGCTAGTTTTTGCATGAGAGCTAACACCCCTCACGTTTAGTTACTTTTTTCCTCCACATAAATTTATAGTAGTCTTATAAGTCACTATTATCCTTACTCTTAAGCAATTAAGCACATAATACTGAGTAGATAACTAGAAATACATTATTTTTCTCGAGATTACAGCTAAATCATTCTAACGCCGTGTTCAATAGCTGCATGCCTGAACGGCTGCACTCACTCATTTCAAAGTAGGCCACATGAGTATAGTTTGTTTATTAAAAAGAGAGAGAGAGAAGGAAACCGTGCAGAAGCACATGAGAAGCCTGCTCAGGTAACACGTCAAACTCAGCCTGACAAAAAAAAAAAAGGTATTTGTCAAAGAGAGGAGAAATTTATATATGGCAAGTCAAATACTAGATTCCGGCGAAAAATGATTTAAACATCTGAATCAAATCTTAACAGTTTTAATAATCATATCCAAATCAAGCCACTTGACTGGCTGGCCCATCCATGCACGAATCTGATCGATCGACCACTGCCTGGAGCTTGAGTTAATGCACTAGATCTCCTGTGCATAGCTGCATGCCTGCATTTGCATCATTGTATGATGTATATGATGTATGTTTCAGCTTCTCGGTGGACGGCAAGGCGGTACGGGTGTTCAAGAACCACGAGGCCGCCGGCGTGCCGTACCCAAGCGGCCAGGCGATGAGGGTGCACGCGAGCCTGTGGAACGGCGACTTCTGGGCGACGCGCGGCGGCCAGGTGAAGATCAACTGGACCGCCGCGCCGTTCGTCGCGTCGTACCGGACCTACGCCTACAGCGCCTGCGCCGTGCCGGCGGCCGGCGGCGGTGGCGGCGGCCCGTGCACGTCCGGCCAGCTACCGAATTCCACGTCGTCGCCGTCGACGTGCGACTGCGGCGGCGCGTGGATGGACAGGCAGCTCGGCGCCGACGGCGAGCGCGACGTGGCGTGGGCGCGGGCGAACTACATGATCTACGATTACTGCGGCGACCAATGGCGGTTCCCGCAGGGCCTTCCGGCCGAATGTAGCCTCGACCAGAGTTCCGGCCATCGCACATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014401